Sphaerodactylus townsendi (Townsend's least gecko): 125437845
Help
Entry
125437845 CDS
T08213
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125437845 (MYOF)
Membrane trafficking [BR:
stow04131
]
Endosome - Lysosome transport
Others
Ferlins
125437845 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
125437845
NCBI-ProteinID:
XP_048361816
LinkDB
All DBs
Position
LG08:36040273..36158846
Genome browser
AA seq
2059 aa
AA seq
DB search
MLRIVVESAANIPKNKFGKPDPIVSVIFKDEKKKTKSIDSELNPVWNEILEFDLKGIPLD
ISSSLQIVVKDFETLGQNKLIGTASLGLKELVGTQSRSLPYKLVPLLNEKGLDTGATIDL
VVGYEPPAGPPNPNDPGGTNTENTEDGEDGGDEDVADGGTGGLSQGGPSGSRELQLARRI
TKGKKNRRALSNKPQDFQIRVRIVEGRQLCGNNIKPVVKVHICGQTHRTRIKRGNNPYFD
EIFFYNIHMTPSELFDETISIRVYDSYSLRADSLMGEFKIDIGYVYDEPGHAAMRKWLLL
NDPEDTNSGPKGYLKVSMFVLGTGDEPPVENRERDNDNDDVESNLLLPAGIALRWVTFVL
KIYRAEDIPQMDDAFAQTVKEIFGGEADKKNLVDPFVEVCFAGKKVCTNIIEKNANPEWN
QLINLQIKFPSMCEKMRLTIYDWDRLTKNDTIGTTYLGLSRIAASGGEVEELSRSGAGAS
SYEANTGETEVGFLPTFGPCYLNLYGSPREYTGFPDPYDELNSGKGEGVAYRGRILVELC
TLLDCEPRSKKIETIPSDDILVVEKYQRRRKYSLSVVFHSAAMLQDIGEAIQFEVSIGNY
GNKFDNTCKPLASTTQYSRGVFDGNYYYYLPWANTKPVVTLTSFWEDISHRLDPLNIILV
IVEKLQTNLAAFKSAIQEKMSEDHLFKIWLKLIDELMEDLSKEFPAEGKQNITILDTHIR
KLRLKSFKQIQEAAARLRDEVQDVKATLTDIEDWLDKLIHLSEEPQNSMPDVIIWMIRGE
KRLAYARIPAHEVLYSTTSAGASGKYCGKTQTVFLKYPQDKNNGAKIPAQLRVNVWLGLS
AVEKKFNSFAEGTFSVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREYFLPPK
GWEWDDDWFVDPERSLLTEADAGHSEFTDEVYQNESRYPGGDWKAAEESYTDVNGEKTAP
PSEITCPPGWMWDDDAWIYDINRAVDEKGWEYGITIPPDNKPRSWVAAEKMYHTHRRRRL
IKKRRKDPSQTTTSRLKEESSFYEDQEGWEFASLIGWKFHWKQRSSDTFRRRRWRRKMAP
SDTHGAAAIFKLEGALGADTSTDDGDTTSEKAKSSTAHVFGANTPIVSCTFSRVYSYHFR
CYIYQARNLTALDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTLIFDEIEIYGDPQ
AVAQNPPLVVVELFDNDQVGKDEFLGRTSCSPMVKLNPEFDISPKLLWYPVTNAGKACGD
VLLAAELILREKDGSNLPILPSQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQMA
SVTSPSLIIECGGEMVESVVIKNLKKTPNFPGSVLFMKVLLPKEELYTPSLVLKVVDHRQ
FGRKPIVGQCTIDLLEHFRCDPYATQEDIAPQMKVSLLSAAPRRDVVIEVEATQPLLTAQ
LTEKEEEIVDWWSKFYASTGDTEKCGQYIQKGYETLKVYNCELENVAEFRSLTDFCDTFK
LLRGKSEENDDPTVVGEFKGSFRIYPLPDDPTVPPPPRQFRELPDSGPQECIIRIYIVRG
LVLQPKDNNGLCDPYIKITLGKKVIEDRDNYVPNTINPVFGRMYELSCFLPQEKDLKISV
YDYDVLTRDEKVGETTIDLENRFLSRFGSQCGIPQQYCTSGVNTWRDQLKPTLLLQNLAR
VKGYSLPVLSENGMRINYGGRDYTLDEFEVNKKLHEHLGPAEERLALHILRTQGLVPEHV
ETRTLYSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYELRVIIWNTKDVIL
DEKSITGEEMSDIYVKGWMPGFEENKQKTDVHYRSLDGEGNFNWRFIFPFDYFPAEQLCT
VSKKEHFWSLDSTEFRIPPKLIVQIWDNDKFSLDDYLGFVELDLHNAVIPAKVSEKCTLD
MLPESKPINSFKPLKAASLFEQKSMKGWWPCYQEKDGSRVLAGKIEMTLEVLGEKDIDER
PAGKGRDEPNMNPKLDLPNRPETSFLWFTNPCKTMKFIVWRRFKWVFIGLIFLLIVLLFV
AIFLYSLPNYLSMRIVSPI
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggatagtggtggaatctgctgcaaatatccctaaaaacaagtttgggaaacca
gatccaattgtatcagttatttttaaagatgaaaaaaagaaaacgaagtcaattgacagt
gagctcaaccctgtgtggaatgagatacttgagtttgatttgaaaggaatacctctggat
atatcatcatcccttcagattgttgtgaaagactttgaaaccctgggacaaaacaagcta
attggcacagcatcactagggctcaaggaactggtgggcacacaaagtagatcactccct
tacaagctcgttcccctgctcaatgaaaaggggctggacaccggagcaacaattgattta
gtggtaggatatgaaccgccagctgggcctccaaatcctaatgaccccggggggacaaac
acagagaatacagaagatggagaagatggaggtgatgaagatgtggctgatggtggaact
ggtggcctttcccaaggtggaccaagtggttcccgtgaactgcagctcgctcggcgcatt
accaaggggaaaaaaaatcggagggcattgtctaataaaccacaagacttccagatacgt
gttagaattgttgaaggccgtcagctgtgtgggaataacataaaaccagtagtgaaagta
catatttgtggccaaactcacagaacaagaatcaaaagagggaacaatccctattttgat
gagatctttttctacaacatccacatgaccccttcagagctgtttgatgaaacaataagc
attcgagtatatgactcgtattctttacgtgccgacagtctaatgggggaatttaagatt
gacattggttatgtctatgatgagcctggccatgctgccatgagaaagtggctgcttcta
aatgaccctgaagacacaaattcaggtcccaaaggatacttgaaagtcagcatgtttgtt
cttggaactggagatgagccaccagtggaaaacagagaacgggataatgacaacgatgac
gtagaaagtaaccttttactgccagctggaatagctctccgatgggtcactttcgtttta
aagatctacagagctgaagatattcctcagatggatgatgcttttgcgcaaactgtgaag
gaaatatttggaggagaagcagacaagaaaaacctggtggatccatttgtggaagtctgt
tttgctgggaaaaaggtttgcacaaatattattgaaaagaatgccaacccagaatggaat
caactcattaatcttcaaatcaagtttccttcgatgtgtgaaaaaatgagactgacaata
tatgattgggatcgtcttacaaaaaatgacacaatcggcacaacctatttaggactctcc
agaattgctgcctctggaggggaggttgaagagctttcacgttcgggagctggggcttca
tcgtatgaagcaaacactggggaaacagaagtgggattcttaccaacatttgggccgtgt
tacctaaatctttatggaagtccaagagaatacactggattcccagatccatatgatgag
ctgaactctggaaagggggaaggtgtagcctacagaggcagaatcttagtggaactatgt
acactgcttgattgtgaacctcgtagtaagaagattgagacaatacccagtgatgacata
ctggttgttgagaaatatcagcgcagaagaaagtacagtctcagtgttgtattccattct
gctgctatgttacaagacattggtgaggctatccagtttgaagttagcattgggaattat
gggaataaatttgataacacctgtaaaccactggcatcaacaactcagtacagtcgtggt
gtttttgatggaaactactactactacctgccatgggcaaacacaaagccagtagtgact
ctgacttcattttgggaagatataagtcatagactggatcccttaaatattattcttgtg
atagtggaaaaactgcaaacaaacttagcagccttcaaatcagcaatacaggaaaagatg
tcagaagaccacttgtttaagatatggctgaagctaattgacgaacttatggaggattta
agtaaggaattccctgctgaaggcaagcagaatattacaatccttgatacccacatccga
aaactgcggctcaaatcatttaagcaaattcaggaggcagcagcaagattgagggatgaa
gtccaagatgtgaaggccactctgacagatattgaagattggttggataaactaatacat
ttaagtgaagagccacagaacagcatgcctgatgtgatcatctggatgatccgaggggag
aagaggctcgcctatgcacgcattcctgcccacgaggttttatattccactacaagtgct
ggggcatctggaaagtattgcgggaagacccagaccgtctttctaaagtacccacaggac
aaaaacaacggcgcaaaaatacctgcacagttgcgggttaatgtttggctgggattgagt
gcggttgagaagaagtttaatagctttgccgaaggaacatttagtgtctttgctgaaatg
tatgaaaatcaggctcttatgtttggaaaatggggaacttcaggacttgtcggccgccac
aaattttctgatgtcacaggaaaaatcaagctgaaaagagagtattttctgcctcccaaa
ggctgggagtgggatgacgactggtttgttgatcctgaaagaagcttgttgacagaagca
gatgctggtcattctgagtttactgatgaagtgtatcaaaatgagagccgctaccctgga
ggagactggaaagcagctgaagagagttacactgatgtgaatggtgaaaaaacagctcca
ccaagtgagatcacttgccctccaggttggatgtgggatgatgatgcttggatttatgat
ataaatcgagcagtggatgaaaaaggttgggaatatggaattaccattccccctgacaac
aaaccgcgatcatgggtagctgcagaaaaaatgtatcatacccacagaagacgaaggctg
atcaaaaaacgcagaaaagacccaagtcaaactacaacatcaaggcttaaagaagaaagc
tcattctatgaggatcaagaaggatgggaatttgcctctttgattgggtggaaatttcac
tggaaacagcgcagttcagatactttccgccgccgccgctggaggagaaaaatggctccc
tcagacacacatggtgcagcagccatctttaagcttgaaggtgctcttggagcagataca
agtactgatgatggagacacgacttcagagaaggccaaaagttcaacagcacatgtattt
ggtgcaaacactcctatagtttcctgtacctttagcagagtctacagttaccactttcgg
tgttacatctatcaagctcgaaatcttacagctttggacaaagacagtttttcagatcca
tatgctcatgtttcattcctccatcgaagtaaaacaactgagataatccattcaacactg
aatccaacatgggatcaaaccctcatatttgatgaaattgaaatatatggagacccccaa
gcagtagcacaaaaccctcctcttgtggttgtagaactctttgacaatgatcaagtgggc
aaagatgagtttctgggaagaacctcttgctctccaatggtgaaactcaatccagaattt
gacatcagtcctaagcttttgtggtatccagttacaaatgcaggaaaggcttgtggagat
gtccttttggcagctgagcttatattgagggaaaaggatggatccaacctgccaattctt
ccatcacaaagagcaccaaatctttatatggttccacaaggaattcgacctgtagttcag
ctgactgctattgagatccttgcctggggattacgcaacatgaaaaactaccaaatggct
tctgttacatcccctagtcttatcatagagtgtggaggagaaatggtggaatctgtagtg
attaaaaacctgaagaagacaccaaattttccaggatctgttctcttcatgaaagtgctg
ctgcccaaggaggaattgtacactccatccttagttcttaaagtggtagatcacaggcaa
ttcggccgtaaacctatcgtgggacaatgtaccattgatttactagagcattttcgctgt
gatccttatgctactcaagaagacattgcaccacagatgaaagttagtctcctgtctgct
gcccctcgtcgagatgtggtgattgaagtggaagccacccagcccctactcacagcacag
ctgacagaaaaggaagaagaaattgtagactggtggagtaaattttatgcttcaacagga
gatactgaaaaatgtggacaatacattcaaaaaggatatgaaacactaaaggtgtacaac
tgtgaactggagaatgtggctgaatttaggagtttaacagacttctgtgatactttcaag
ctgctacggggaaaatctgaagaaaatgatgaccctacagttgtaggggaatttaaggga
tccttcaggatctacccattgccagatgaccctactgttccacctcctcccagacagttc
cgtgagctaccagacagtggacctcaagaatgtattatacggatttatattgtccgcggc
ttagttctccaacctaaggataacaatgggctgtgtgatccatacattaaaattacgtta
ggaaaaaaagttattgaagacagagataattatgttcccaacactatcaatccagttttt
ggcagaatgtatgaactgagctgcttcttgcctcaagagaaggatctgaagatttctgtg
tatgactatgatgtgctgacacgagatgagaaagtcggggaaaccaccattgatctggag
aacaggttcctctcccgttttggttctcaatgtggaatacctcagcagtactgcacttca
ggggtaaacacctggagagatcaactgaaaccaacacttctcttgcaaaacttagcccgg
gtcaaaggctactctctaccggtcctttctgaaaatggaatgagaattaattatggaggc
agagattacactttggatgaatttgaggtcaacaaaaaactacatgaacacctcggacct
gcggaagaacggcttgctcttcacattctcagaactcagggcttggtgcctgaacatgta
gagacaagaaccttgtacagtaccttccagccaaacatctcacaaggaaagcttcagatg
tgggtggatgtcttccccaaaagcttgggccctcctggccctcctttcaacatcactcct
cgcaaagctaagaaatatgaactgcgggtcattatatggaatacaaaggatgtcattcta
gatgagaaaagcatcacaggggaagaaatgagtgacatttatgtgaaaggatggatgcct
ggatttgaagaaaataagcagaaaacagatgtgcattacaggtccctggatggggagggg
aatttcaactggagattcatttttccttttgattattttccagctgagcagctctgtact
gtttccaaaaaggaacacttctggagtcttgacagtacggaattcagaatcccacccaag
cttatcgttcagatatgggacaacgataagttttccttggatgactatctgggttttgtt
gaacttgatttacacaatgcggttatcccggcaaaggtttcagaaaagtgcacgttggac
atgcttccagaatctaagcccatcaattctttcaagcccctgaaagctgcttcgctcttt
gaacagaagtccatgaaagggtggtggccatgctaccaggaaaaagatggctcacgtgtc
ttagcaggtaaaatagagatgactctggaggtccttggagaaaaagacatcgatgagcgg
ccagctggtaaaggaagagatgaacctaacatgaacccaaagttagatctaccaaatcgt
ccagaaacttccttcctttggttcacaaatccttgcaagactatgaaattcattgtctgg
cgcagattcaaatgggtcttcataggcctcatcttcctgctgattgtgctcctatttgtg
gcaatcttcctctattcattgccgaactacctgtcaatgaggattgtgagccctatttaa
DBGET
integrated database retrieval system
