Sphaerodactylus townsendi (Townsend's least gecko): 125437953
Help
Entry
125437953 CDS
T08213
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125437953 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125437953 (DHX36)
03012 Translation factors [BR:
stow03012
]
125437953 (DHX36)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125437953 (DHX36)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125437953 (DHX36)
Translation factors [BR:
stow03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125437953 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_16
AAA_14
NPHP3_N
Ntox8
AAA_23
ABC_tran
Sir1
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
125437953
NCBI-ProteinID:
XP_048362008
LinkDB
All DBs
Position
LG08:complement(88647487..88675933)
Genome browser
AA seq
993 aa
AA seq
DB search
MSYEHRRDWSRGGGGPRSSQSSPSSSFSTGRSGGGGGGGRGGRGRPPPHLKGREIGLWYA
RRQGEKSKEAERQQRAVVRMDERREEKIVQLLNNVQSKNEKEQEAMSWWSDEEEYAKEVP
AKPKPVVEKPVVEKAPEKPRRILERTFLDRDSEYLLEENRPDVGLDEHLKEELEKKKSDS
RYIEMQRFREKLPSYGMRKELVSLINSSQVTVISGETGCGKTTQVTQFILDDYIERGKGS
FCRIVCTQPRRISAISVAERVAAERAEVCGNGKSTGYQIRLESRLPRRQGSILYCTTGIV
LQWLQSDKQLSSVSHVILDEIHERNLQSDVLMTVIKDLLSVRLDLKVILMSATLNAEKFS
EYFDHCPIIHIPGFTYPVEEYLLEDVIEKLRYIPENADHRPHWKRRFMQGHISRREKEEK
EELYREQWPDYLKQLAGRYSESTIEALGMMDDDKVDLDLIAALIRYISLEEEDGAILVFL
PGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPYGVRKIVIATNIAE
TSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLY
NGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAHFLSKLMDPPSRDAVWLSIDHLM
QLNALSRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL
GKEKVADARRKELSKNTKSDHLTVVNAFQGWEEAQRRGFRCEKDYCWEYFLSSNTLQMLR
NMKGQFAEHLLAAGFVNSRSPKDSKSNINSDNEKLLKAVICAGLYPKVAKIRANHSKKRK
MVKVSTKPDGTVNIHPKSVNVEEGEFHYNWLVYHLKMRTSSIYLYDCTEVSPYSLLFFGG
DISIQKDKDQDTIAVDEWIVFQSPARIAQLVKDLKRELDDLLQEKIENPHPVDWNNTEAR
DTAVLTAIIDLITTQENETARNFAPRFQNEQFS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgagcaccgtcgggactggagccgcggcggcggcgggcctcgctcttcccag
tcatcgccctcttcttccttctccacaggccgtagtggcggcgggggaggaggaggaaga
ggcggccgtgggcggcctcctcctcacctgaagggccgcgagataggcttgtggtacgcg
cggaggcagggcgagaagagcaaagaggccgagcggcagcagagagctgtggtacgtatg
gacgagcgtagagaagagaagattgtgcagttgctcaacaatgtccagagcaagaatgaa
aaagaacaagaagctatgtcgtggtggtctgatgaggaagagtacgcgaaagaggttcct
gcaaaaccaaagccagttgtggagaaacctgttgtggagaaggcacctgagaaaccaagg
cgtatcttggagagaacgttcctagatcgagattcagaatatctcttagaagaaaatagg
ccagatgttggtttggatgagcaccttaaagaagaacttgaaaagaagaaatctgattcc
agatatattgaaatgcagagatttcgtgaaaaactgccttcttatgggatgagaaaggaa
cttgtgagccttataaacagtagtcaggtaactgttataagtggtgagactggttgtggg
aagacaacccaagttactcagtttattctggatgactatatcgaaagaggcaaggggtct
ttctgcagaattgtgtgcactcagccgaggaggatcagtgctatctctgtagcagagaga
gttgcagcagagagggccgaagtgtgcggtaacggaaagagcactggatatcagattcgt
cttgaaagccggttaccaaggagacaaggttcaattttgtactgcacaactggaattgtc
ttacagtggctccagtcagacaagcagctgtccagtgttagtcatgtaatccttgatgaa
atccatgagagaaatcttcaatcagatgttttaatgacagttattaaagatctcctaagt
gtacggctagacctcaaagtaatattaatgagtgcaacgctgaacgctgagaagttttca
gaatattttgatcattgtcctatcatccatattcctggtttcacctaccctgtcgaggaa
taccttttagaagatgtaattgaaaaactacgatacattccagaaaatgctgatcacaga
ccccactggaaaaggagattcatgcaaggacacataagcaggcgagaaaaggaggaaaaa
gaagaactctatcgtgagcaatggcctgattatttaaagcaactggcaggaagatattca
gaaagtacaattgaggcactgggaatgatggatgacgataaggttgaccttgacttgatt
gctgcactgatcagatatatttctcttgaggaagaggatggtgcaatactagtatttttg
cctggctgggacaacatcagcactctacatgaccttctgatgtctcaagttatgtttaaa
tcagataggttccttatcattcctttgcattcattaatgcctactgttaatcagacccag
gtttttaaaaggaccccctatggagttcgtaaaattgtaatagctactaatattgctgaa
accagcatcaccattgatgatgtggtatacgtgatagatggcggaaagataaaggaaact
cactttgatacacagaacaacattagtacgatggctgctgagtgggtcagtaaagcaaat
gccaagcaaaggaaaggcagagcaggaagagtccagccaggacactgctatcatttgtac
aatggtctgcgtgccagcctgctggatgattatcagttgccagaaattttgaggacaccg
ttggaggaactctgtttacaaatcaagattttaaagcttggaggaattgctcactttctg
agtaaactcatggacccaccatctcgggatgctgtgtggctgtctatagatcatctcatg
cagctgaatgccttgagtagacaagaagaattgactccccttggagttcatttggcacgg
ttaccagtggagccccacatcgggaaaatgattctctttggagccttattctgttgctta
gatcctgttctcactattgcagccagcctgagcttcaaggacccatttgtcatccctctg
ggtaaggaaaaagtagcagatgcaagaagaaaggaactatcaaaaaataccaaaagtgac
catctgacggttgtgaatgctttccagggttgggaagaagcccagcgccgtggcttcaga
tgtgaaaaagattattgctgggaatattttctttcttcgaatacattgcagatgcttcgt
aacatgaaagggcagtttgcagaacatctccttgctgctgggtttgtgaatagcagaagc
cccaaggattccaaatccaacattaactcagacaatgaaaagttactcaaagctgttata
tgcgctggtttatatccaaaggttgcaaagatccgggcaaatcacagcaaaaaaaggaaa
atggtcaaagtttccaccaaacctgatggaacagtcaacattcatcctaaatctgtgaac
gttgaagagggagagtttcattacaactggcttgtgtatcacttgaaaatgagaacaagc
agtatatacctgtatgattgcacagaagtctctccgtactctttgctgttctttggagga
gatatttctatccagaaggataaagatcaggatacgattgcggtggatgaatggatcgtc
ttccagtctccagcacgaatagcccagttagtgaaggatttgaagagagaattggatgac
cttctgcaagagaaaatagaaaacccacaccctgtggactggaacaatacggaagcaagg
gacactgcagtgctgacagccattatagacttaatcacaacccaagagaatgaaacagcc
agaaactttgccccccgtttccagaacgaacaattcagctaa
DBGET
integrated database retrieval system
