Sphaerodactylus townsendi (Townsend's least gecko): 125438109
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Entry
125438109 CDS
T08213
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125438109 (MMS19)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125438109 (MMS19)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125438109 (MMS19)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125438109 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
125438109
NCBI-ProteinID:
XP_048362249
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All DBs
Position
LG08:complement(64906128..64930254)
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AA seq
1021 aa
AA seq
DB search
MMAAGGADVDAGAPGSQLPPWERESAAREAAEGVKAGTCTILELVETLGSLLENADPRMR
ARGLQVLSEVLLQCYSLLQEKEVTHLVLFFENRLKDHHTVIPSVLQGLKALSMCAALAPG
LAVSVLKAIFQEVHVQSLLQLDRHTVYSIITNFMSDRETELKSLGADFTFGFIQVMDGEK
DPRNLLVAFQIVRDIIIKGYALGPFVEELFEVTSCYFPIDFIPPPNDPHGIQREDLIASL
RAVLTSTPAFAEFLLPLLIEKMDSDVQSAKMDSLQTLNAACIIYGQKELKDFLPSLWSSL
RREVFQTASERIETEGLSTLRSLSTCLSRSVLSSDDEDLLDSFLGGILKDCRHHLCEPDM
KLVWPSAKLLQAAAGGSLRAYYQITSNVFPLLVEQYNKHLQSSQRRTILEVLLGFLELRQ
KWGPEEEDKSPLLCSKDALCSMVFSALVEPNVQLQLVGIRALTFLGLLQGLLDFPDVDRL
VDSLARFILHEEDSQTSLAAMEAAGTLTPFYPEAVSRCLVRKLSEGLQSESQEDSTEFQQ
DRCLQALAAVSTHPSITKETVPVLLQHLQEVEKGSMQGGIHSVVSVCRSLKQMALQCQQN
TQNYWDLHQAVVPCLMGLAVQAALQENTHTMLSKVLLKEEALSAMARVISAACMYLSPEL
AAQSVSKVVPLFLDGELSFLPGNSFPGTFQPFQGGQCQVETQKKLVALLMAFVCSLPRNV
PVPQQDRLLRELLALSCSSDCPFAATAAAKCFAGLVNKHPAGPQLDELLGAAMAKLEQGL
NDGPCRSQALTLLLWVSKALLLRYHPLTTHLTDKLLVLLGDPVLGPAVGDGFALLMADSP
DVLGKSCHADVRLMFRQRFFTECVPQLVQGFHTAAPGVKANYLKGLSHILNHLPKPVLVT
ELPTLLPLLLEALSCPDCVVQLSTLHCLQPLLLDAPLVVSLHVDTLVGKFLGLTDSPAMA
IRIAALQCLLALASLPTPVVIPYKPRVIRALAKPLDDKKRLVRKEAVTARGEWFLLGTPG
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggctggaggggctgatgttgatgcaggcgcgcctgggtcccagctgccgcct
tgggagcgggaaagtgcggcccgagaagcggcggaaggggtgaaagctgggacctgcacc
atattggagcttgtggaaaccttgggatctctgcttgagaatgcagaccctcgaatgcgt
gcacgcggccttcaggtgctctctgaagtcttgctacagtgctactccctacttcaggaa
aaagaagtgacccacctggtcttgttcttcgagaaccggctgaaagatcatcatactgtc
attccctctgtgctgcagggcctcaaagctctaagtatgtgtgcagcattggctccaggc
ctggcagtgtctgttctcaaagccatcttccaggaggttcatgtccagtctctgcttcag
ttagatcgccatacagtctacagcatcattacgaatttcatgagtgaccgagagacagaa
ctgaagagcctgggtgctgatttcaccttcggcttcatccaggtgatggatggggagaag
gaccctcgcaacctgttagtggcctttcagattgtgcgagacatcattataaaaggctat
gcacttgggccctttgtagaggagctgtttgaggtgacatcctgctacttccctatcgac
tttattccccctccaaacgatcctcatggaatccagagagaagacttgattgccagcctg
cgggcagtgctaacctccacccctgcttttgctgagtttctgcttccacttctcattgag
aaaatggattctgatgtacaaagtgccaagatggactccctacagacactgaatgctgcc
tgcataatctatgggcagaaagagctgaaggattttctcccaagcctctggtcatccttg
cgcagagaggtgttccagacagcaagtgagaggattgaaacagagggtctctccactttg
cgttctctgtcaacatgcctgtcgcgctcagtgctcagctcagatgatgaggaccttctg
gattccttccttggaggcattttgaaggattgcaggcaccacctgtgtgagccagacatg
aagttggtgtggccgagtgcaaagctcctgcaggcagctgcagggggttccttgcgggct
tattaccagatcacaagcaatgtgtttccattactggtggagcagtataacaagcatttg
caaagtagtcagcgtaggacaatcttggaggtgctccttggtttcttggagctgcggcag
aagtggggtcctgaggaagaagacaagagtcccctgctttgctccaaagatgctctgtgc
tccatggtgttctcagcacttgttgagcccaacgtgcaactacagttggttgggatccga
gcgttgaccttcttaggattactgcaagggctcctggatttcccagatgtggatagactt
gtggacagcctggctcgattcattctccatgaggaagattcccagaccagcttggctgcc
atggaggctgcaggcaccctgactcccttctatcccgaggccgtcagcagatgcttggtt
cggaagctctcggagggtctgcagtcagaatcgcaggaggacagcactgaattccagcag
gaccgttgcctgcaggccttggcagcagtctccacccacccaagtataacgaaggagacg
gttcctgttcttctccagcatctccaggaggtggagaaaggcagcatgcagggagggatc
cactctgtggtgtctgtgtgccggagtctgaagcagatggcattgcagtgccagcaaaat
actcagaattattgggacttgcatcaggctgtagtgccttgcttgatgggcttagccgtg
caggctgcattgcaagaaaatacccacaccatgctaagcaaagtgctgctgaaggaggaa
gccttatccgccatggcacgggtcatcagtgctgcttgtatgtacttaagtccagagctg
gctgcccagagtgtctccaaagtggtacctctcttcctagacggagagctctccttcctg
cctggaaacagctttcctggcactttccagccctttcagggtgggcagtgccaagttgag
acccagaaaaaacttgttgctctgctcatggcattcgtgtgctccttaccaagaaacgtg
ccagttcctcagcaggaccgattactacgggaactgcttgccttaagctgctcctctgac
tgtcctttcgctgccacagccgccgccaaatgttttgcaggcttggttaacaagcaccca
gcagggcctcagttagatgagctgttgggagcagccatggccaagttggagcaaggcctg
aatgacggtccctgcagaagccaggctctcactctgctgctgtgggtgagcaaagctctg
ttgttgcgctatcacccactgaccacccacctgaccgacaagctgctcgtgctcttgggg
gatccagtccttggtccagcagtgggcgatgggtttgccctgctcatggctgactctcca
gatgtgctgggcaagagttgccatgccgatgtgcgcctcatgttccgccagcgctttttc
acagagtgtgtgccacaactggtgcaagggttccacacagctgccccaggtgtgaaagca
aattacttgaaaggcctttctcatatactcaaccacctgcccaagccagtgctggtgaca
gagctgcctacattgctcccactgttgctggaagccttgtcatgtcctgattgtgtggtc
cagctctccacattgcactgtctgcagccactgttgctcgatgcacccctggttgtgagt
ctgcatgttgacacacttgtgggaaaatttcttggcctgacagacagcccagccatggcc
attcgtattgctgcacttcaatgcctccttgcactcgcttctttacccaccccagtggtg
atcccctacaagccacgcgtgatccgagcactggctaaacctttggatgacaagaagcgg
ctagtacggaaagaagcggtgacagcacgaggagaatggtttcttctcgggacccctggc
aggtga
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integrated database retrieval system
