Sphaerodactylus townsendi (Townsend's least gecko): 125438120
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Entry
125438120 CDS
T08213
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125438120 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125438120 (EXOSC1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125438120 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125438120 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
125438120
NCBI-ProteinID:
XP_048362272
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Position
LG08:complement(64887363..64892787)
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AA seq
194 aa
AA seq
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MAPARYCVPGERLCSLEEGTPGSGTYTRHGSIFSSLAGCFIKKSENGMLPVVCVMRDADS
QLLPDVGATVTCKVCSINSRFAKVHILYVSSTPLKSPFRGTIRREDIRATEKDKVEVYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHAKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggccccggcgcggtactgtgttcctggtgagagactctgcagcctagaggaaggaacc
cctggcagtggtacctacacccgtcatggctctatattttcctctttggcaggttgtttc
attaagaaaagtgagaatggcatgctgccagtggtctgtgtaatgagggatgcagattct
caacttctacctgatgtgggagccacagtgacatgcaaggtttgcagcattaattcacgt
tttgcaaaggtacacatcttgtacgtcagttctacaccactgaaatccccattccgtgga
acaatacggagagaagatatccgagctacagagaaagacaaggtggaggtttacaagagt
ttccgcccaggtgacatcgttctggccaaagttatctcattgggggatgtacaatccaac
tacctgctgaccacagcagagaatgagctgggtgtagtggtggctcatagtgaagcagga
gtacagatggtgccaatcagctggtgtgaaatgcagtgccccagtacacatgccaaagaa
ctgcgcaaagtagcccgggtgcagcctcagtttctacagacctaa
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