Sphaerodactylus townsendi (Townsend's least gecko): 125438225
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Entry
125438225 CDS
T08213
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125438225 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125438225 (TRIP12)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125438225 (TRIP12)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
HECT type E3
125438225 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
125438225
NCBI-ProteinID:
XP_048362452
LinkDB
All DBs
Position
LG08:complement(82201450..82309804)
Genome browser
AA seq
2068 aa
AA seq
DB search
MSNRPNNSPGGSLRRSQRNTVGAQPQDDAVGGRSHLGQAKHKAHSPSESRKSISKAPKVQ
PNTTTEQSKGHFSKRGCSSSAIIIPQQEALDTDNTLERQKPGQVPKKDSTRGVKRSASPD
YNRTNSPSPAKKTKALQHADSSSDLETNKPQAKSKKRHLHQEQESKSSQLPSTSKAHTRK
GGATGSSRSQKRKRTETSTIVKSRPAAETTGTEESPAKPTKLASKSASSAKAGCSTITDS
SSSASTSSSSSVVASASSAVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQNKIGS
SSKFDWAARFNPKVSLPKAKLSLPGSSKPETSKPGPSGLQAKLASLRKSKKRSESPPAEL
PSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARADEAP
QGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTI
GSGASSKAQQLLQGLQATDESQQLQSVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQM
EHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSR
RHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRL
THQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMV
VRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLI
CELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHPELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPP
KACTNGSGTLGATTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTATQSPKSSFLASLNPKTWGRLGAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKDQAHRFVERYFSSENMDGSNPALNVLQRLC
TATEQLNLQVDGGVECLVEIRSIVSESDVSSFEIQHSGFMKQLLLYLTSKSEKDVVSRDV
RLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDSNKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVSNPLEVYLISSPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNASCKEVIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKSCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQ
EGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFNIDPVVARSVYHLEEIVRQKRRLEQDKSQTKENLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDG
FESVFPLSHLLYFYPEELDQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacagtccaggggggtcactgcgacgttcacaaaggaacact
gtcggggcccaaccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagcccttctgaaagtagaaaatcaatatcaaaggcacccaaagtgcag
cccaatactactactgaacagtccaagggacacttttctaaaagaggctgtagttcatct
gctattataattccacaacaagaggctctggacacagacaatactttggagaggcaaaaa
ccagggcaggtgcctaagaaagacagtactcgaggagtgaaacgcagtgctagcccagat
tacaaccggacaaattcccctagccctgccaaaaaaaccaaagcacttcagcacgctgat
tcttcctcagatttggaaacaaataagccacaggctaaatctaagaaaagacacttgcat
caggagcaggagtcaaagtcttcacaattaccatcaacaagcaaggctcataccagaaag
ggtggagctaccggtagctcccgaagccagaaacggaaaaggacagagacttcaaccatt
gtaaagagtcgtccagcagctgaaacgactggcactgaggagagcccagcaaaacccacc
aagctggcttcaaaatcagcgagctcagccaaagctgggtgtagcaccatcactgattcc
tcttcttcagcctctacgtcgtcttcttcatctgttgttgcttctgcctcttctgctgtt
cctcagggtgccagagtgaaacagggaaaagaccagagcaaggccaggcgttccagatct
gcatctagtccaagcccccggaggagtagccgggataaagaacagaataaaataggcagc
tcttcaaaatttgactgggctgctcgctttaaccccaaagttagcctgcctaaagcaaaa
ctgtctctaccaggctcttctaaaccagaaacatcgaaacctgggccttcaggattacag
gctaaactagcaagcttgagaaaatcaaaaaagcgcagtgaatcgccacctgctgagctc
cccagtttgaggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagtcgt
cggggctctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaaaatggct
gatcctgataacaaccaggatggagttaattcttcagctgcacgagccgatgaggctcca
caaggagctgcagcatctagttctgttgctggagctgtgggcatgaccacttctggagaa
agtgaatcagatgactctgagatgggcagattgcaagctctgctggaagctagaggcctt
ccaccacatctgtttggtcctcttggtcctcgaatgtcacagttgttccatcggacaatt
gggagtggagctagttctaaggctcagcagcttctacaagggctccaggctactgatgaa
agccagcagttgcaatctgtgattgaaatgtgtcagttgttggtcatgggaaacgaagaa
actttgggaggttttccagtcaagagtgttgtaccagctttgataacactgctgcagatg
gagcacaattttgacattatgaatcatgcttgtcgagccttaacctatatgatggaagca
cttcccaggtcatctgctgttgtggtagatgcgattcctgtttttttggaaaagctgcaa
gttattcagtgtattgatgtggcagagcaggcactgactgccttggagatgttatcacgc
aggcatagtaaagctattctgcaggcaggaggcttggcagactgtctgctgtatctggag
tttttcagcataaatgcccagaggaatgcattagcaattgccgccaactgctgccagagc
atcactcctgatgagtttcactttgttgcagattctctaccattgcttacacaaaggcta
actcaccaggacaaaaagtcagtagaaagcacttgcctctgttttgcacgtctagtggac
aacttccagcacgaagagaatttgcttcagcaggttgcctcaaaggatttgctcacaaat
attcagcagctcctggtagtgactcctccaattctgagctcagggatgttcatcatggtg
gtgcgcatgttttccctaatgtgttccaattgtcctacactagcagttcaacttatgaag
caaaatattgcagaaacacttcactttcttctttgtggagcctcaaatggaagttgtcag
gaacaaatagacctcgttccaagaagccctcaagaactgtatgagcttacttcacttatc
tgtgaactgatgccatgcctgcctaaagaaggaatatttgctgttgacactatgctaaag
aaagggaacgcacaaaacacagatggtgcaatatggcagtggcgagatgacaggggactg
tggcatccctataacagaattgatagccggataattgaggcagcccatcaggtcggtgaa
gatgagataagcttgtctacattggggcgtgtttatacaattgactttaattctatgcag
cagatcaatgaggatactggaacagcacgtgccattcagagaaaacctaaccctctagcc
aatacgaacactagtggacatccagaattgaagaaagatgatgctcgagctcagttaatg
aaagaagacccggaactggctaaatcatttattaaaacattgtttggtgttctctatgaa
gtgtacagttcttcagctggacctgctgttagacacaagtgccttagagcaattcttagg
ataatatattttgctgatgctgaacttctgaaggatgtactgaaaaaccatgctgtgtcg
agtcatattgcctccatgctgtcaagtcaagacctgaagatagtagttggagctcttcag
atggcagaaatcttaatgcaaaagttacctgacatctttagtgtttacttcagaagagaa
ggtgtgatgcaccaggtgaaaaatctagcggaatcagaggctttgctgacgagtcccccg
aaagcatgcactaatggctcaggaacgctgggtgcgactacaacgataagcactggaaca
gccactgctgctagcaatgcagctgcagacttgggttctccaagcttacagcacagcagg
gaagactctctggacctgagtccacagggccgattaagtgatgttcttaaaagaaaaaga
ttgccaaaacgtgggccccgacggccaaagtattcaccgccaagagatgatgacaaagta
gacaatcaagctaaaagccctacagctacgcagtctcctaaatcttcctttttggcaagt
ttgaaccctaaaacgtgggggaggctaggcgcacagtccaatagcaacaacattgaacca
gcacgtacagcaggtgtcagtggtcttgcaagagctgcctcaaaggatactatatccaac
aacagagagaaaatcaagggttggattaaagatcaagcccacagatttgtggagcgttac
tttagttctgagaacatggatggaagcaaccctgcactaaatgtgttacagagactttgc
actgcaactgaacaactcaaccttcaggtggacggtggagttgagtgccttgtagaaatc
cgtagtatagtctctgagtctgatgtctcttcgtttgagatccagcatagtgggtttatg
aaacagttgctgctttacttgacgtccaaaagtgaaaaggatgttgtaagccgggatgtc
agattgaaaagatttcttcatgtatttttctcttctcctcttcctggagaagaacccctt
ggaagattagagccattagaaaatgcacctttgttggcattagtccacaaaatgaataat
tgtcttagtcagatggagcaatttccagttaaagtccatgactttccaagtggaaatgga
acagggagcagtttttctcttaacagaggatcccaagctttaaaatttttcaacactcat
cagttaaaatgccagctgcaaagacatccagactgtgctaatgtgaaacagtggaaaggt
ggaccagtgaagatagatccccttgcattggtacaagccattgagagataccttgtagtg
agaggttatggacgagtgagggaagatgatgaagatagtgatgatgatggatcagatgaa
gaaatagatgaatctctggctgctcagttcttgaattcagggaatgtgaggcacaggctg
cagttttacatcggagaacatctcctgccatataacatgacagtgtatcaagcagttaga
cagttcagtttgcaagcagaagaggaaagggagtccacggatgatgaaagcaacccatta
ggaagagctggcatttggacaaagacacataccatttggtacaagccagtccgagaagat
gaagacagtaataaagactgtgttggtggcaaaagaggaagagcacaaactgctcctaca
aaaacatcccctagaaatgcaaaaaagcatgatgaactgtggcatgatggagtgtgtcct
tctgtctcaaatcctttggaagtttaccttatatcttcacctcctgaaaatataactttt
gaagatccttcgttagatgttattcttcttttgagagttttacatgctatcagtcgctat
tggtattacctgtatgataatgcaagctgtaaagaggttattccaacttcagaatttatc
aacagtaaactcacagcaaaagctaacaggcagcttcaagatcctttggtgataatgaca
ggaaacataccaacgtggctaacggagcttggaaaatcatgtccctttttctttccgttt
gatacacggcaaatgctgttttatgtaactgcttttgatcgagatcgagccatgcagaga
ctgctagataccaatccagaaatcaaccagtctgattctcaggatagcagagtggcacca
cgattggacaggaaaaagcgtactgtgaacagggaggagctgttgaaacaagcagaatcg
gtgatgcaagatctgggtagttcaagagccatgctggagatccagtatgagaacgaagtt
ggcacaggtttaggacctacactggagttttatgcacttgtatctcaggaactacagaga
gcagatctgggcttgtggagaggcgaagaagttactcttgccaatcctaaaggaagccaa
gaagggaccaaatatattcataatcttcaaggcctgtttgcacttccctttggtagaacg
gctaaacctgctcatattgctaaggttaaaatgaagttccgtttcctggggaaactcatg
gcaaaagcgatcatggatttcagactggtggaccttccccttggcctccctttttacaaa
tggatgcttcgacaggaaacatctctgacatctcatgatttgttcaacattgatcctgta
gtagccagatctgtgtaccatcttgaagaaattgtgagacagaagagaagacttgaacag
gataaatcacagaccaaagaaaatctccagtatgcgttggaaaccctaacaatgaatgga
tgctcagttgaagacttggggttggatttcacattaccagggttccccaacatagagctg
aaaaaaggagggaaagatatacctgtcacaattcataatttagaagaatatctcagacta
gtcatattctgggcactaaatgaaggtgtttccaggcaatttgactccttcagagatgga
tttgaatctgtctttcccctcagtcaccttctgtacttctatcccgaggagctggatcag
ttgctgtgtggcagcaaaacagatacttgggatgcaaagacattaatggaatgttgcagg
ccggatcatggttatacacatgacagtcgtgctgtgaagttcctgtttgaaattctcagt
agttttgatagtgagcagcaaagattatttctccagtttgtgactggtagccctagactg
ccagtaggaggctttcgaagtttgaatcctccgcttacaatcgtacgcaagacatttgag
tctacagaaaatccagatgacttcttaccctcagtaatgacctgtgtaaactatctcaag
ttgccagactattcaagtattgagataatgcgcgaaaaactcttgatagctgcaagagaa
gggcagcagtcattccatctttcctga
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integrated database retrieval system
