Sphaerodactylus townsendi (Townsend's least gecko): 125438386
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Entry
125438386 CDS
T08213
Symbol
SOX2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125438386 (SOX2)
Transcription factors [BR:
stow03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125438386 (SOX2)
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125438386
NCBI-ProteinID:
XP_048362787
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Position
LG08:104461167..104475898
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AA seq
312 aa
AA seq
DB search
MYSMMGGRLKPPAPQTTPGGNGASGAANAKNSPDRVKRPMNAFMVWSRGQRRKMDRRTPR
CXGSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKY
TLPGGLLPPGSNSLGGGVGVGAPLGAGVNQRMDSYAHMNGWANGGYGMMQEQLAYPQPSG
LNAHAAAQMQPMHRYDVGALQYNAMPSAASQTYMNGSPPYGGMAYAPQQGALASMGSAVK
SEASASPPVVTSSSHSRAPCQAGDLRDMISMYLPAADVAEPAAPGRLHMAQHYQTAPVPG
TAINGTLPLSHM
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgggaggcaggctgaagccccccgccccgcagacgacgccggggggc
aacggcgcctcgggggcggccaacgccaagaacagcccggaccgggtcaagcggcccatg
aacgccttcatggtgtggtcgcggggccagcggcgcaagatggacaggagaacccccaga
tgcnntggctcggagatctccaagcgcctgggcgccgagtggaagctgctgtccgaggcc
gagaagcggcccttcatcgacgaggccaagcggctccgcgcgctgcacatgaaggagcac
ccggattacaagtaccggccgcggcggaaaaccaagacgctgctcaagaaggataagtac
accctgccggggggcctcctgccgccgggctcgaactcgctgggcggcggggtgggcgtc
ggggcgccgctgggcgccggggtcaaccagcgcatggacagctacgcgcacatgaacggc
tgggccaacggcggctacggcatgatgcaggagcagctggcctacccgcagccgtcgggc
ctgaacgcgcacgccgccgcccagatgcagcccatgcaccgctacgacgtgggcgccctg
cagtacaacgccatgccctcggccgcctcgcagacgtacatgaacggctcgcccccctac
ggcggcatggcctacgccccccagcagggcgccctggcctccatgggctcggccgtcaag
agcgaggccagcgccagcccgcccgtcgtcacctcgtcgtcgcactcgcgggcgccctgc
caggccggagacctgcgggacatgatcagcatgtacctccccgccgccgacgtggccgag
ccggcggcccccggaaggctgcacatggcgcagcactaccagaccgcaccggtgcccggc
acggccatcaacggcacgctgccgctgtcgcatatgtga
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