Sphaerodactylus townsendi (Townsend's least gecko): 125438906
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Entry
125438906 CDS
T08213
Symbol
CDH20
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125438906 (CDH20)
Cell adhesion molecules [BR:
stow04515
]
Cadherins
Major cadherins
125438906 (CDH20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Wzy_C
Motif
Other DBs
NCBI-GeneID:
125438906
NCBI-ProteinID:
XP_048363546
LinkDB
All DBs
Position
LG09:14118342..14369275
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AA seq
800 aa
AA seq
DB search
MWTSSRMGSMKWFGLSISICFYLMMNLITIVLSESARPPGKGQEVSLSDNLFLHQRMKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVAAVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSRTGLIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNISLSDVNDNPPRFPQKHYQMSILESAPVSSTVGRVLAKD
LDEGINAEMKYSLVDGDGLDAFDIMTDPNYQVGIITVRKPLSFETKKSYTLKVEGANPHL
EMRFLNLGPFRDTATVHVSVEDVDEPPVFEPSFYFVEVPEDVDIGTTIQMLYAKDPDVTN
NSIRYSIDRSSDPGRFFYVDVSTGALMTARPLDREDIAWHNITVYAVETNNPSQVGSVTV
TVRVLDVNDNVPEFPRFYEAFVCENAKPGQLVQTVSAVDQDDPQEGQHFYYSLAPEAANN
PNFTLRDNQDNTAWILTRRSGFRQHEQNTFYLPVLIADNGRPMLSSTGTVTIRVCSCDDK
GLLMSCNAEAYVLPVTLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDEDENIHE
NIVRYDDEGGGEEDTEAFDISALWNPREAHLVMKSRQDMMPEIESLSRYVPQACTMDSSV
HSYVLAKLYEADMDLWAPPFDSLQTYMFEGNGSVAESLSSLQSVTTDSEQNYDYLTDWGP
RFKKLAEMYGATEGNGGTQW
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttccagcagaatgggcagcatgaagtggtttggactcagtatatccatatgc
ttttacttaatgatgaacctcattacaattgtattatctgagagcgccaggccacctggt
aaaggacaagaagttagcttgtcagacaatttgtttctacatcagcgaatgaagaggagc
tgggtgtggaaccaattctttgttttggaagaatacactggaacagatcctttatatgtg
ggaaagctccattctgatatggacagaggagatggatcaattaaatatatcctatcagga
gaaggagcaggtattgtattcaccatcgatgacactactggggatatccacgctattcag
aggctagaccgggaagagaggtcccagtacacgttgagggcccaagccttggatagacgg
acaggcaggccaatggaaccggaatctgaattcatcatcaaaatccaagatatcaatgac
aatgaacccaaattcctggacgggccatacgttgctgcagtaccagaaatgtcaccagtg
ggcacttccgttatccaagtgacagcaacagatgctgatgatcctacctatgggaacagt
gccagggtggtctacagcatcctccaaggacagccatatttctctgtggactccagaaca
ggtttaattagaacagcactaatgaacatggacagagaagcaaaggaatattacgaagtg
attatccaagccaaagatatgggcggacagctggggggtttagctgggacaaccaccgta
aacatcagcctgtccgatgtcaatgacaatccacccagatttccacagaaacattatcaa
atgagcatattagaatctgctcccgtcagctctaccgtgggccgtgtccttgcgaaagac
ttggatgaaggcatcaatgcggaaatgaaatatagcttagtggatggggacggtctggat
gcttttgatattatgacggatcctaattatcaagttggcataatcaccgtgagaaagccc
ctgagcttcgagaccaagaaaagctacacgctgaaagtagagggtgccaacccccacctg
gaaatgcgctttctcaacctaggcccattccgtgacaccgcgactgtgcacgtcagcgtg
gaggatgtggacgagccaccggtgtttgagcctagcttttattttgtggaggtacctgaa
gatgtggacattgggaccaccatacaaatgctttatgccaaggaccctgatgtgaccaac
aactcaatcagatactccattgaccggagcagtgaccctgggcggtttttttatgtcgac
gtttcaacgggcgctttgatgactgcacgaccgctggatcgggaagacattgcgtggcac
aacatcactgtctatgccgtggagacgaacaacccttcccaagttgggagtgttacagtc
acagtcagagtcctggatgtgaatgacaatgttcctgaattccccaggttctatgaggct
tttgtgtgcgaaaatgcgaagcctgggcagctggttcagacagttagcgcagtggaccaa
gatgacccacaggagggacagcacttctactacagcttggcgcccgaggcagccaacaac
cccaatttcactctaagggacaatcaagacaatacagcttggattctaactaggagatca
ggcttccggcagcatgagcagaatacgttttaccttcctgtcctgatagctgataatggg
cgccccatgctgagcagcaccgggactgtaacaatccgcgtctgcagctgcgatgacaaa
ggtctgctgatgtcctgcaacgcagaggcatacgtccttccagtcactctcagcagagga
gcgcttattgctattctagcctgcatcttcgtcttgctagtgctggtgttgctgatctta
tcaatgagaagacacaggaagcagccttacattattgatgaagacgaaaacatccacgag
aatatcgtacgctacgatgatgagggcggcggggaggaagacacggaagcctttgacatc
tctgccctttggaaccctagagaggcccacctggtgatgaagagcaggcaggacatgatg
cccgaaatagagagcctctccagatacgtccctcaagcatgcacaatggacagcagtgtc
cacagctacgtactggccaagctctacgaagcggacatggacctctgggctccccccttt
gactctctccagacgtacatgttcgagggcaacgggtccgtggcagagtccctcagttcc
ttgcagtcagtgacgacagactcggagcaaaactatgactacctgacggactggggcccc
cgctttaaaaagctggccgaaatgtacggcgccacagaagggaacggcggcacccagtgg
taa
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