Sphaerodactylus townsendi (Townsend's least gecko): 125438938
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Entry
125438938 CDS
T08213
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125438938 (CARMIL1)
Membrane trafficking [BR:
stow04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125438938 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Spectrin_5
IL34
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
125438938
NCBI-ProteinID:
XP_048363628
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All DBs
Position
LG09:28813394..28969977
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AA seq
1384 aa
AA seq
DB search
MTDETSDVPKELLESVKDIIGRKIKISVKKKIKLEVKGDKVDNKILVLTSCRAFMLTSRI
PTKLELTFSYLEIQGITSNKPGQLIVETEKCNISMKLASSEDIHEVLAHIGTCLRRIFPG
LSPLRIMKKIIMDPPERLANLQTLWDSQSVAELGPCGGFSQMYACVCDWLGFPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSADVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALSHNPNSGLHTINLAGNPLEDRGVSSLSVQF
AKLPKGLTHLNVSKTSLSPKGVNSLSQSLSANQLLATTLTHFDLSGNILRGDDLSHLHNF
LAQSNAITHLDLSNTECALDMMCGALLHGCLQHLAILNLSRTVFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLPPEPLKALLLGLACNQNLKEVSLDLSSCELGHCLRSGGAQVLEG
CIAEIHNIASLDISDNGLESDLSTLIVWLSKNRSIRHLALGKNFNNMKSKNLAPVLDNLV
QMIQDEESPLQSLSLADSKLKAEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQ
INTKLRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPVNDASQALKTSPEKTEEALQK
IENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGVDSIQED
LKSAERLMKDAKNSKTLLPNLYHLGGTSWAGATGSLSNPIQETLESMAGEVTRVVDDQLK
TLLESMVDAAENLCPSAMKKAHIRQDLIEACTEKISIPRTFVKNVLLEQSGIDILNKISE
VKLTVASLLSDRIVDEILDALSFCHHKLADHLTRRGKPLPHQESLEIELAQEKPAKRSII
TVEELTEIERLEDLDTCMTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDRALEEVP
IHIEDPPFPSGRLDKRGSGFISELPSEEGKKLEHFTKLRPKRNKKQQPTQAAVTSTAAPH
DGEQNGLMGRVDEGVDEFFTKKVTKMDSKKFLTRSSDSGDAGEAVDEKKKRDSRKSGFLN
LIKSRSKSERPQTVTVSEEPSTPKGAVRGPTATDSTKKETKSVEQNGSTEKTEELKTPDS
LEEASLEDAGKSEKSDSKGSPQGGRRYGVQVMGSGLLAEMKAKQERRAASAQKKFGNDAR
DSAEISVNSERLDGSSTVAKLHQASPESRLALSKGDSISSSSEKIAKTEPKTETGVRTRS
SSSTPTSPKPPLQSTKPSLAGRPTVPQKPRSASRTEDIPESPSGPGSPKIALLPPVLKRV
PSDKEKDGQSSPQPAIRSLSQEGPKRQQTYEFQEQKQRSLSKDGQQGSKSSDSGEEADKD
FIFV
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagacctccgacgttcccaaagagttgctagaaagcgtcaaggatataatt
ggaaggaagataaaaatttcagtgaaaaagaaaattaagctagaagttaaaggtgacaaa
gtggataacaaaatactggtgctaacatcatgccgagcctttatgctaacatctcgtatt
cctacaaaactagaactaactttcagctacttggaaatccaaggaatcaccagcaataaa
ccaggccagctgattgtagaaacagaaaaatgcaacatttctatgaagttggcgtcctct
gaagatatccatgaagtactggcacacattggaacgtgccttaggaggatattccctggt
ctttctccactgagaataatgaaaaaaattattatggatcccccagaaagattggctaac
ctgcagacactttgggacagtcaaagtgtggcagaactaggaccatgtggaggtttttct
caaatgtacgcgtgtgtctgtgactggctggggtttccatatagggaggaagtgcagtgg
gatgttgatacaatttatctgactcaagataccagggaattgaatttgcaagacttcagc
catctggatcacagggatttaatacctattgttgctgctctagaatacaatcagtggttt
acaaagctttcctccaaggatctaaaattatccgctgatgtttgtgagcagatcttgaga
gtggtgagcagatccaatagactggaagaattagtactggagaatgcaggtcttagaaca
gattttgcacagaaactggccagtgccctatcccataatcccaactcaggacttcataca
attaaccttgccggcaaccccttggaggacagaggtgtgtcctcactaagtgttcaattt
gccaaactgccaaaggggctgacgcatttaaatgtatctaagacctcattatcaccgaaa
ggggtgaacagcctttcccagtcactgagtgccaaccagctgttagctaccacacttact
cattttgatctctcagggaatattcttcggggtgatgacctttcacacttacataacttt
ttggcccagtcaaatgctattacacatctggatttatccaacacggagtgtgcattagac
atgatgtgtggagcacttcttcacggatgccttcaacatcttgccatcctaaacctatcc
cggacagttttttctcacagaaaggggaaggaggttcctccatcattcaaacagtttttc
agcagttcacttgctttgatgcaaatcaacctttcagggaccaaactccctcccgaacca
ctaaaagcactcttattgggccttgcttgcaaccaaaatttgaaggaggtgtctctagat
ctaagtagctgtgagcttggtcactgcctaagatcaggaggagcacaagttttggaagga
tgcatagcagaaatacacaatatcgccagcctagatatttcagataatgggctagaatct
gatctttcaacccttatagtctggcttagtaaaaaccgatcaataagacacctggctttg
ggcaaaaatttcaacaacatgaaatccaagaatttggcccctgttcttgataatttggta
caaatgattcaagacgaagaatcacccttgcagtcgctgtctctagcagattccaagctg
aaggcagaggtgactatcattatcaatgcactggggagcaatacctctctgacaaaagtg
gatattagtggaaatggaatgggagatatgggggcaaagatgctagcgaaggctcttcag
attaacaccaaactcagaactgttatatgggacaagaataatattactgcacagggcttc
caggatatagcagtggcactagaaaagaattataccctaagattcatgcctatacctgtg
aatgatgcttctcaagcacttaaaacaagccctgagaaaactgaagaggcactccaaaag
atagaaaactatttgcttcgaaaccatgaaacccgaaaatatctacaagagcaagcatat
cgactgcagcaaggcatagttactagtacgacacagcagatgattgacagaatatgtgtt
aaagttcaagaccatctcaattcactgaggaactgtggcgttgatagtatccaagaagat
ctgaaatcagcagaaaggctgatgaaagacgctaagaactctaaaacattgttaccaaac
ctgtaccatcttggtggaacttcatgggcgggagcaactggttccttatccaacccaatt
caagaaacactagaatcaatggctggagaggtcaccagggtcgtggatgatcaactcaag
acattacttgagtctatggtggatgcagctgaaaatctctgtccaagtgcaatgaagaaa
gcacacatacggcaagatttgattgaagcctgtactgagaagatttccatcccacggact
tttgttaaaaatgttctgttggagcagtctggaattgatatcctcaataaaattagtgaa
gtgaagctgacagtggcctctttgctttcggaccgaatagtagatgagatccttgatgct
ttgtcattttgccatcataagctggctgaccatttgaccaggcgaggcaaacccctgccc
caccaggaatcattagaaattgaactagcacaggaaaaacctgctaaacgttccatcatc
acagttgaggagctgactgaaattgaacgtttggaagacttagacacatgcatgactctc
tgctgtacaagtatgactcctaagtcaaaaaggaagagcatccacagtagaatgttgcga
cctgtgtccagagcatttgaaatggagtttgatttggacagagctttagaagaagttccc
atccacatagaggaccccccattcccttcaggaagactggacaaacggggttctgggttc
atttcagagttgccttctgaggaggggaaaaaacttgaacactttacaaagctaaggccg
aaaaggaataaaaaacaacaacccacccaagctgctgtcactagtactgcagcaccccat
gacggagaacagaatggtcttatgggaagagtagatgaaggtgtggatgaattttttacc
aagaaggtgacaaagatggattcaaagaagttcttgacaagaagttcagactccggtgac
gctggagaagcagttgatgaaaagaaaaagagagattctaggaaaagcggctttctgaat
ttaataaaatctagatccaaatctgaacgtcctcagactgtaacagtgtcagaagagcct
tcaacgcccaaaggggcagtcagaggccccacagcaacagattctacaaagaaagaaacc
aagtcggtggaacagaatggcagcactgaaaaaacggaggaattaaaaacaccagactcc
ttagaagaggcttccttggaggatgctgggaaatctgagaagagtgacagcaaaggcagt
cctcaaggagggcgtagatatggggtgcaagtgatgggcagtggactcctagcagaaatg
aaagctaaacaagaacgaagagctgcatcagcacaaaagaaatttggaaatgacgcaaga
gactcagctgaaatctctgtgaactcagaacggttggatggaagtagtacagtagctaag
ctccatcaagcctctccagagagccggttggccttgagcaaaggtgattccatctcatct
tcatcagaaaaaattgcaaaaactgaaccaaagacagaaactggggtaaggacacgaagt
tcttccagtacacctaccagtccaaagcctccgcttcagtcaacaaagcccagccttgcc
gggcggccaaccgttcctcagaagccacgttctgcctctcggactgaggatatcccagag
tctccatctggtccaggttcccctaaaatagctctgcttccacctgtcttgaagagagtt
ccttctgataaagaaaaagatgggcagagcagcccgcagcctgctattaggtctctttca
caggaaggtccaaagagacagcagacttacgaattccaagagcaaaaacagagatcttta
agtaaagacggtcagcaaggaagcaagtccagtgattccggagaagaagcagataaagat
tttatttttgtttag
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