Sphaerodactylus townsendi (Townsend's least gecko): 125439134
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Entry
125439134 CDS
T08213
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125439134 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125439134 (RAD54B)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
125439134 (RAD54B)
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
AAA_34
Motif
Other DBs
NCBI-GeneID:
125439134
NCBI-ProteinID:
XP_048364012
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Position
LG09:88967554..88994651
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AA seq
833 aa
AA seq
DB search
MSVLSVEELGSVCNREVRCELSLSLICLVPLTAGTGAAEVSRQQEEPSCLTKYFSAVWCK
ISKKKHKKWEGDAVVIVKGKSAVLKDMEGKVIGRGTGYKAKDLENLDQGQTLKIGGKEIE
VLGVIQEEDFKSGRCFQAGGETLMETPNFSQSTVKPFCNPLKNICQTKTQGNLLKGSRNC
KPRHDPCAPNCLVMLHPTINHQQKFNKANLPIVDVVVDPHIVNYLRPHQREGVIFLYECV
MGMRANGRLGAILADEMGLGKTLQCISLIWTLLHQGPYGSKPVIKQVLIVTPGSLVKNWG
KEFQKWLGNERIKVFLTDQDHKVEEFINSPLYVVLVISYEMLLRSLDQIQKTEFSLIICD
EGHRLKNTSIKTSAALASLPCERRIILTGTPVQNDLQEFYALIDFVNPGILGPLSAYRKV
YEEPIIRSQEPSATTEEIELGERRAAELTRLTGLFILRRTQETISKFLPPKKESIIFCRP
TALQHELYLRLLRSQMVRSCLQGSLENSPHLICIGALKKLCNHPQLLFKTMKEKEGNLNC
DEQEKLNLCEGLLNVFSQEYTPASFLESDSGKLQVLTQLLANIHEHSPSERVVVVSNYTQ
MLNVLQEVCKRHGYSYTRLDGSTPVSQRQQIVDSFNSKFSPAFVFLLSSKAGGVGLNLTG
ASHLVLYDIDWNPATDIQAMARVWRDGQKRTVHIYRLLTTGTIEEKIYQRQISKQGLSGA
VVDLSKGSEQIRFSVEELRNLFILHEDSPCVTHDLLECKCMGKKDHQGLPEKLSVQEDDQ
LDQRRGKLISRKNLSMSQLMQWKHLSGEHESLPSLFLERIKGNITFIFQNVTT
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttctttcagttgaggagctgggctcagtctgcaacagagaggtccgttgtgag
ctctctctttccctgatctgtcttgtccctcttacagcaggcacaggggcggcggaggtc
tcaaggcagcaagaggagccaagctgcctcacaaaatacttcagtgcagtgtggtgtaag
atctcaaagaaaaaacacaaaaaatgggaaggcgatgctgtggttattgtgaaggggaag
tccgcagtactgaaagacatggaaggcaaagtcattggaagaggcactggatacaaagcc
aaagatctggaaaatcttgatcaaggtcaaacgctcaagattggaggcaaagagatcgaa
gtgctgggcgtcattcaggaagaggatttcaaaagcggccggtgttttcaagctggtggg
gagactctaatggagacaccaaacttctctcaatccaccgtgaagccattctgtaaccct
ctcaaaaatatctgccaaaccaaaactcaaggaaacttgctgaaaggctcccggaactgt
aaacctcgtcacgatccgtgcgcaccaaattgtttggttatgctacacccaaccataaat
caccaacagaagttcaataaagcgaatttgcctattgtggacgtggttgtagatcctcac
attgtaaattatcttcggccgcaccagcgagaaggagtaatatttctttatgagtgcgtg
atgggaatgagagcgaatggcagattaggcgctattctggccgatgaaatgggcttaggc
aaaacgctgcagtgcatttccctcatctggactctcctgcatcaggggccctatggaagc
aagccagtaatcaaacaagtcctgatagtcactcctgggagcctggtgaagaattggggg
aaagaatttcagaagtggttgggaaatgaaaggatcaaggtgtttttgactgatcaggat
cataaggtggaagagtttatcaattcccccctttatgtggtcctggtcattagttatgag
atgcttctgcggtccttggaccaaattcagaagacggagttcagtctgataatctgtgat
gagggacatcgtttgaaaaacacctccattaaaactagtgctgctcttgccagcttacct
tgtgaaagaagaattatacttacaggtactccagtacaaaatgatcttcaagaattctat
gcattaatagactttgtaaatcctggaatacttggacctttgtccgcatacagaaaagta
tacgaggaacccattatcagatcacaagagccttcagcaacgacggaagaaattgaacta
ggggagagaagggcagcagagctcacccgcctgactggactctttattctcagaagaacc
caagagacgatcagcaagtttctccctcccaagaaggagagcatcattttctgccgcccg
acagcactgcagcatgagctctacctccggctgctacgttcccagatggtcagatcgtgt
ctgcaggggagtctcgagaacagcccacatttaatatgtattggagctctgaaaaaactt
tgcaaccatcctcagctcctcttcaaaacaatgaaggaaaaggaaggcaatctaaattgt
gatgaacaagaaaaactgaatctctgtgagggtttgctcaacgttttttctcaagaatat
actccagcatcttttttggagtcagactcgggaaaattgcaggtgctgacacagttgctg
gctaacattcatgaacacagtccttcagaaagagtcgtggtggtatctaattacacccag
atgctaaatgtgttgcaagaagtttgcaaacggcatggatattcctacacaagactcgac
ggaagcacacctgtttcccagcgacaacagattgttgatagttttaatagcaaatttagt
ccagcatttgtctttctgctgagttcaaaggcaggcggtgtaggcctgaacctcactgga
gcatcccacttagtcctatatgatattgactggaatccagccacggatattcaggcaatg
gccagagtgtggcgagatggacagaagcgaacagtacacatctacagacttcttactaca
ggtacaatcgaagagaaaatctatcagaggcagatcagcaagcaagggctgtccggggct
gttgtagacctttccaagggatctgaacaaatccgcttttctgttgaagaactcagaaat
ctctttatattgcatgaagattcgccgtgtgttacccatgatctgctggaatgtaagtgc
atgggcaagaaagatcatcaaggacttccagaaaagctttctgtgcaggaagacgaccag
cttgaccaacgcaggggcaaactcatctcccgaaaaaacttgtctatgtcacagctgatg
cagtggaaacacctgtctggggagcatgagagtctacccagtctcttcctcgaaagaata
aaaggaaatattacattcattttccaaaatgtgaccacttga
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