Sphaerodactylus townsendi (Townsend's least gecko): 125439350
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Entry
125439350 CDS
T08213
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125439350 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125439350 (NHLRC1)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125439350 (NHLRC1)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125439350 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_3
Baculo_IE-1
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
Prok-RING_4
Neurexophilin
Motif
Other DBs
NCBI-GeneID:
125439350
NCBI-ProteinID:
XP_048364392
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All DBs
Position
LG09:complement(25694562..25697838)
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AA seq
406 aa
AA seq
DB search
MSVMATEKVEIMAKLVDQTETSLFECKVCFERYSQQKIRRPRNLPCGHVMCLKCVSSLAH
PRNLKLECPFCRRACKSSETSDCLPLLHLMEILSPSAIHSPVSGRTIGTGEDMAVSASHV
LTFGLSFGGWGTLLNPTGIAVCQKSGCIAVAHDGKKRIKLFTFNGSCMQQFGERGGAGND
IMYPTDVTFTLDGHIVVTDSGDRSVKVFDFNGRGKLVISESFSLPWGLDTTPENDIVMTD
SEAGILYRLTADFKKGELREVRKMYSNLCNPRKVAVSQASGAISVIEHLMAKGPSFGCIR
VKVFSADMKLVSQVDSFGLNLVFPSKLYPSAVTFNKEGHVIATDASNQTVFDLGKPEDFP
VCKPIITQGLSYPLALAYTANNSLIVLDGGDHSLKVYTTCSNIGEE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcatggccactgagaaagtagagatcatggcaaagctggttgatcagacagag
accagtctgtttgaatgcaaagtgtgctttgaaagatacagccagcagaaaatacgtagg
ccaagaaacttgccatgtggacatgttatgtgcctgaaatgcgtctcttctctagctcat
ccacggaatcttaagttggagtgtcctttttgccgaagagcttgcaaatcttctgagacc
agtgactgtttgccgctgctgcacttgatggaaatattgagcccttcggctattcattct
ccagtttctggaaggacgattgggacaggtgaggatatggctgtgtcagcatctcatgtc
ttaacatttggcctttcctttggaggatggggaacgctcctcaatccaaccggtattgcg
gtctgtcagaagtctggctgcatagcagtggcccacgatggcaagaagaggattaagctg
tttactttcaacgggagctgcatgcaacagtttggagaaagaggaggagcaggaaatgac
attatgtacccaactgatgtcactttcacgttggatggtcacattgtagtcacagacagt
ggagaccgttctgtcaaagtgtttgattttaatggcagaggcaagcttgtgatctcagag
tccttctctttgccctggggccttgacactacgcctgagaacgatattgtcatgaccgat
tcagaggcaggaattttgtatcgcttgacagctgactttaaaaagggggaattaagggaa
gtgaggaaaatgtattctaatctgtgtaacccaagaaaagtggccgtttctcaggcttct
ggggctatttcagtaatagaacatctaatggcaaaaggcccaagctttggctgcatcaga
gtgaaagtcttcagtgcagatatgaagctcgtcagccaggtggatagttttggcctgaat
cttgtgtttccttccaaactctatcccagtgccgtcaccttcaacaaggaaggacacgtt
atagcaactgatgcctctaaccaaacagtatttgaccttggaaaacccgaagatttccct
gtatgtaaacccatcattacacagggtctttcctaccccttggcgttagcttacactgca
aataattctctgattgtcttggacgggggggatcattctttaaaagtatataccacttgt
tcaaatattggggaagaatga
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integrated database retrieval system
