Sphaerodactylus townsendi (Townsend's least gecko): 125439439
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Entry
125439439 CDS
T08213
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125439439 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stow01009
]
125439439 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125439439 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
stow03029
]
125439439 (RB1CC1)
Protein phosphatases and associated proteins [BR:
stow01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125439439 (RB1CC1)
Membrane trafficking [BR:
stow04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125439439 (RB1CC1)
Mitochondrial biogenesis [BR:
stow03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125439439 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
SET_assoc
Motif
Other DBs
NCBI-GeneID:
125439439
NCBI-ProteinID:
XP_048364501
LinkDB
All DBs
Position
LG09:complement(54128907..54197052)
Genome browser
AA seq
1577 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKQAIQTKYKIAIQHQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFESAYSNYLH
SIDDIKLKLTHLGAAVSIMAKIPLLECLTRHSYRECLERLDSSVEHEGTEGEDTENEKSA
EVVLSPDMSKMNRQSLLASCCKSVERSTLDGTVSERINENREASQNPSVQGSEISAELKE
SDLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKIVEKLSNVPQMYCLAVVEVVRRKTFVKHYKEWASSLIKDGKHLYDAEKTKRETF
GKLFRKSFLRNRLFRGLDAWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKISNSQASPQSVITPRMES
TTGTIATSPRTPPSLSLQGPLCPPECPAGPIEELSPDSIDAHTFDFETIAHPSIGNSLKQ
GSLDLDSLAESPESDFMSAVNEFIIEENPTSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTNICTKEAVLENSAINVYMEKCRVATQESQLNLRNFKEDLCHFRTFVEKEQCDFSSS
LKCTSIEIRNIIEKVKMSLEKTLKDKHRNELQSVKMEYESRMNILVEDSEENEKKIIKLK
LDLKNLEDILHDKDDEFAVVKNEKEAVVCLQNEKEEKLLELECQMRNQCCEIKELRESRE
SVLESLKKLHIETDEKMYLLKTELQSLEQDHLKELEASLHVRHTQEFEVLIAKNRDCLDK
LKKENQCQLEHMQESHAVKVQEKEKQIEELKFKVSELSDLRCKLEVELALKEAETDEMKL
LLEKSKTQQQDNLKSVIDKETDILRKEIDKLNHLIQINDEEYQIGLAELRTLMTIEKDYC
ISELIGRHEEETNLLKTELNKVTSLHQKAFEAEKRLEEQITELQGKLELAVTTLEKQKEE
NLALCEQQKRYEATVSQLEEEKQLLVTNCEEDRKLLVEKLNGEKEDAVRIALKEFELHRE
AVEKELLEKIQQLEMQVNQSSAESSASSLVAELQEKLQEEKLKFLEQLEEHEKRKNEEMQ
NIRTSLTAEQQTTFNTVLTREKMKKENIINDLSDKLKTITQQQERDKDLIETLSEDRARL
LEEKKKLEEEVNKLRSGSSVLSTYLPPTSEPSGACAADFTADAERLTSDTSEEGKMDSAM
ETSMMAVNENVQMLSEEKQRIMLLEKMSQSMSSVSLRHSEKIAIRDFQVGDLVLIILDER
HDNYVLFTVSPTLYFLHSESLAALDLRPASGASRRPWVLGKVMEKEYCQAKKAQNRFKVP
LGTKFYRVKAVPWNKKV
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggaaccacccttacctttgatacagaactt
gcagtacaaaatgttgcggaccttaaacaagcaattcaaacaaagtacaaaattgctatt
caacatcaggtgctggttgtcaatggaggagagtgtatggcagctgacaggaaagtttgt
agttacagcgctgggacggacacaaacccaatttttctcttcaacaaagaaatgatcctt
tgtgaacgtcctccagctatccccaaaacgacattttcagcagaaaatgagatggaatta
aaagttgaagaatctcttatgatgcctgcagtttttcacacagtagcttcacggacacag
cttgctgtggagatgtatgagattgccaagaagctttgttccttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgccatcatggcaaatttggaagactgc
acatattcctaccaaaagctacttttcaagtttgaaagtgcatattcaaattatctacac
tccatagatgatattaagctgaaacttacacatttaggggctgctgtttccataatggcc
aagatcccactgctggagtgcctaaccagacatagttacagggaatgtttagaacggcta
gattcttctgttgaacatgaaggtacagaaggtgaagatactgagaatgagaagtcggct
gaagtggtgctttctcctgacatgtctaaaatgaacagacaatcactgctggcctcatgt
tgcaaatcagtagaacgctcaaccttagatggcacagtttctgaaagaatcaatgaaaat
agggaagccagtcaaaacccttcagtccaaggcagtgaaatctcagcagagttgaaagag
agtgacctaccatctttcaatgtctccctattagactggataaatgttcaagatagacct
aatgatgttgaatccttggtcaggaaatgttttgattctatgaacagacttgatccaagg
attattcagccctttttggcagaatgtcgacaaactattgccaaattagataatcagaac
atgaaggccattaaggggcttgaagaccggctttatgcattggatcagatgatagctagt
tgtagcaggctggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagcagagaacttgaaagatccttctgtattacctgatttgtgtttaagtcatgcaaat
caattgatgattatgttaactaaccacaggaaacttttagacattaaacagaaatgtact
actgccaaacaagaacttgcaaataatttacaagtcagactgaagtggtgctgttttgta
atgcttcatgctgaccaagatggagagaaactgcaagccttgctccgtcttgtaacagag
ctgctagaacgagtgaagattgtagagaaacttagtaacgtccctcagatgtactgtttg
gctgttgttgaagtcgtaaggagaaagacatttgtaaaacactacaaggagtgggctagc
tctttaataaaagatgggaaacatctttatgatgcagaaaagaccaaaagggaaactttt
gggaaattatttaggaagtcttttctaagaaatcgcttattcagaggtcttgatgcctgg
ccgccatcgttttgtactcggaaacctcgcagatttgatagtgaacttcctgatatctca
ttatctgacttgcagtttctgcagtccttttgtccttcagaagtccaaccattactcagg
gttcccatactttgtgattttgaacctctccatcagcatgtacttgctctacataacctg
gtcaaagcagcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaa
caaaagatttccaacagtcaagcttccccacaatctgtaattactccaaggatggaaagt
acaacaggaacaattgctacctctcctagaactcctccatcactcagccttcagggtcct
ctctgccctccagagtgccccgcaggtccaatagaagaattgtctcctgacagtattgat
gctcatacatttgattttgaaacaattgcacacccaagtataggcaattctctgaaacaa
ggttcattagacttggactcactggcagaaagtccagaatctgacttcatgtcagcagtg
aatgaatttataatagaagaaaatccaacatctccaaatgtgataagtgatcctcaaagt
ccagaaatgatggtggagtctctgtattcctcagttatcaatgcaattgatagcaggcgg
atgcaagacacaaacatctgtacaaaagaagcagtcctagaaaattctgctataaatgtt
tacatggagaaatgtagagttgctacccaagaatcacagttaaatttaagaaacttcaaa
gaagacctttgtcactttagaacatttgtagaaaaagaacagtgcgacttttctagttct
ttaaaatgtacatcaatagaaataagaaatattatagaaaaagttaaaatgtctcttgaa
aagacactaaaagataagcatcgcaacgaactgcagtctgtaaaaatggaatatgaaagc
agaatgaatatcttagttgaggacagtgaggagaacgaaaaaaagattataaaattaaag
ttagacttgaaaaatcttgaagatattttgcatgataaagatgatgaatttgccgtcgta
aagaatgaaaaggaagccgttgtgtgtttacagaatgaaaaagaggagaagctgcttgaa
ctggaatgccaaatgaggaatcaatgttgtgaaattaaggaattaagggaatcccgtgaa
agtgtgttagaaagtttgaaaaagcttcatatagaaacagatgaaaaaatgtaccttttg
aaaacagaacttcagagtttggagcaagatcatctgaaggaactagaagccagtcttcat
gtcagacacacgcaagaatttgaagtgctaatagcgaaaaacagggattgtttggacaag
ttaaaaaaggaaaatcagtgccaacttgagcacatgcaagaatctcatgctgtaaaagtc
caagaaaaagagaaacagattgaagaactaaagtttaaggtttctgaattgtctgacttg
aggtgcaaattggaagttgaacttgccttgaaagaagcagaaacagatgaaatgaaacta
ctcttagaaaaaagcaaaactcagcagcaggataatttaaaatctgtcattgacaaggaa
actgacattttaagaaaggagattgataaattgaaccatctaattcaaattaatgatgag
gaatatcagataggattagcggaactaagaactttgatgactatcgagaaagattattgc
atttcagaattaattggccggcatgaagaagaaacaaatttgcttaaaacggagttgaac
aaagtaacttctttgcatcagaaagcgtttgaagcagaaaaaaggttggaagaacaaata
acagaactgcaaggtaaactagaattggcggtgactaccctagaaaagcaaaaagaggag
aatttggctctctgtgaacagcagaaaaggtatgaagccactgtgagtcagcttgaagag
gagaaacagctgctggtcactaactgtgaggaagataggaagctgcttgtcgagaagctc
aatggtgaaaaagaagatgcagtacgaattgccctgaaagaatttgagttgcacagggaa
gctgtggaaaaagaacttttggaaaaaattcagcaacttgagatgcaggttaaccagagt
tcggctgaatcatctgcgtcaagcttggttgctgaacttcaagaaaaactccaggaggag
aaactgaagtttttggagcagcttgaagaacatgagaaaagaaaaaacgaggaaatgcaa
aatattcgaacatcactcactgcagaacagcagactactttcaacactgttctgacgaga
gagaaaatgaaaaaagaaaacataataaatgatcttagtgacaaattaaaaacgattaca
caacagcaagaaagagataaggatctgattgaaaccctttctgaagaccgagctcgttta
cttgaagagaagaagaaacttgaagaagaagtgaataagctgagaagtggaagttctgtt
ctgtcaacttatttaccacctacttcagaaccctctggagcttgtgcagcagattttaca
gcagatgctgagcgattgacttcagatacatctgaggaaggaaaaatggattctgcaatg
gaaactagcatgatggctgtaaatgaaaatgttcagatgttgtctgaagaaaaacagagg
ataatgttgttagaaaaaatgtctcaaagcatgtcttcagtgtcacttaggcattctgaa
aaaatagctatcagagattttcaggttggcgatttggttctcattattttggatgaacgc
catgacaactatgtattatttactgttagcccaactttgtatttcttgcactcagaatct
ctcgctgcactggacctcagaccagcttcaggtgcatctagaagaccctgggtgctaggg
aaagtaatggaaaaagaatattgccaggctaaaaaggcacaaaacagatttaaagttcct
ctaggtacaaagttctacagagtaaaagcagtgccatggaacaagaaggtataa
DBGET
integrated database retrieval system
