Sphaerodactylus townsendi (Townsend's least gecko): 125439520
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Entry
125439520 CDS
T08213
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125439520 (CHD7)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125439520 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
125439520
NCBI-ProteinID:
XP_048364581
LinkDB
All DBs
Position
LG09:57315929..57518194
Genome browser
AA seq
3010 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPIDQGFATLQSPLHHPPAS
QNQAKLSHFDHYNQYEQQKLHLMDQPSRMMSNAPGNGIASPHSQYHNPSVPHGGGTGSQM
GVYPGMQNERHGQPFVDGSSMWGPRAVQVPDQIRAPYQQQQPPPAQQPPPTPSGPPGQGH
PQHMQQMGNYMARGDFSMQQHGQPPQQRMNQFSQSQESLNQGNPFIATSGPGHMSHVPQQ
NPSMGPSLRHSVQQFHHHPPTALHGESVAHNPRFSPNPPQQGAVRPQTLNFSSRGQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGINQNLGLTNNTPINQSVPRYPNAVGFPSNSGQGL
MHQQPLHPSGSLNQMNTQAMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIP
IEVGSYPNMPHPQPSHQPPGAMGIGQRSMGPRNIQQNRPFMGMSSAPREMSGHMRPNGCS
GVGLADPQAIQERLISGPQHPSQSSFQQQMPTCPPMQPHPGIHHQSSPPPHPHHQPWAQL
HPSPQNTPQKVPVLQHSPSEPFLEKSVPDMTQVSGPNAQLLKSDDYLSSIEQQPPQQKKK
KKKNNHVVVEGPNKGFGKEGFPGGLDGQDPTRKLLDCSQEEKKKKKKPKVKKEPKDPKEL
KEKKEPKEPKTPKTPKIPKEPKEKKAKNTTPKPKSNKKASSKKSESESSAVKKKVNKGKE
GPENSDLDKTPQGSPHPEEEDDAGVQKRRSSRQVKRKRYTEDLEFKISDEEVDDADAAGR
NSPSSTSQSEQQESADADGPVVEKIMSSRTVKKQMENGEEVETEEFYVKYKNFSYLHCQW
ASVEVLDKDRRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRILDISHSKDDNGEP
VTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEGRALSRGAGKRNVVERPPADDWKKSEC
SREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGP
FLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQSYEMYFKDPQDRVIKGSYKFH
AIITTFEMILTDCPELRNIPWRCVIIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI
NGAEEKILEEFKETHNPDSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRC
LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV
LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTI
TIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGQNNLVIDTPRV
RKQTRLYSAVKEDELMEFSDLESDSEEKPSIKPRRPQDKSQGYARSECFRVEKNLLVYGW
GRWTDILLHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRA
LVNHSGLSAPVPRGRKGKKVKAQSSQPVLHNADWLASCNPDALFQEDSYKKHLKHHCNKV
LLRVRMLYYLKQEVIGDQADKILEGADSSDVDIWIPEPFHAEVPTDWWDKEADKSLLIGV
FKHGYEKYNSMRADSTLCFLERVGMPDAKAIAAEQRGTDMLTDGGDGGDFDREDEDPEYK
PTRTPFKDEIDEFANSPSDKEESIELHTSKHSESNADFGQLYWPNTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVST
FGVIFDPLKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDEEPPDLS
TVIEPITEERASRTLYRIELLRKVREQVLHHPQLVERLKLCQPSLDLPEWWECGKHDKDL
LIGAAKHGVSRTDYHILNDPELSFLESHKNFAQSRGGGSLNAISLLNPLGVCCSQVSSIV
PSTTAQDEKSAEQTEVKLEGPEKTAAKEKSDSKEEEAPDIAVKSDKENGDAEAEPGPVKC
EMKDTELSTEVDPKSISEKGSEDDEEEKLDDDDKSEESSQPEAGTISQGKNFDEESNASL
STARDETRDGFYMEDGDPSVAQLLQERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNR
RQMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQANISGNEDITVSPQLSKEDALNLSV
PRQRRRRRRKIEIEAERAAKRRNLMEMVAHLRESQVVSENGQEKIVDLSKASREATSSTS
TFSAVPSKFLLPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDVEPPMKRRRGRR
KNVEGLDLLFMSNKQASLAAEDAEMTKVFDEEMETPPLRNIPSPGQLDPDTRIPVINIED
GTRLVGEDAPKNKDLVEWLKLHPSYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKL
DINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVP
ESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLT
SLQNLQNLQSLQLAGLMGFPPGLATAAAAAGGDSKNPAAMLPLMLPGMAGLPNMFGLSGL
LNNPITAASGNTTMASSQGETEDGTSKVEEKKTENEEENKDSEKSTDTVSATDSANGSVS
ATAAAAAATTTTNTGLPANPLTFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGL
QNAVGSSEVKVTDKTEGAAFKDEENLEGSDAEESLDKTADSSALEDEIAQGEELDSLDGG
DEIENNENDE
NT seq
9033 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagcgaaggc
ctggaaggcctgggggaatgcggatatcctgaaaacacagtaaatcctatggggcagcag
atgcccattgatcaaggatttgccactttacagtctccccttcaccatcctccagctagt
cagaatcaagcaaagttgtcccattttgatcactataatcagtatgagcagcagaaattg
cacctaatggatcagcccagcagaatgatgagcaatgctcctgggaacggtatagcatct
cctcattcacagtatcataatccttcagttcctcatggtggtggaactggtagccagatg
ggagtatatcctggtatgcagaatgaaaggcatgggcaaccctttgttgatggtagttcc
atgtgggggccacgggcagttcaagtgccagaccagataagagcaccataccagcagcag
caacccccacctgctcagcagccaccaccaacgccatcaggacctcctggacaaggacat
cctcagcacatgcagcagatgggaaattacatggctcgtggtgacttctcaatgcaacag
catggtcagccaccgcagcagaggatgaaccagttttctcaaagccaggaaagtcttaat
cagggaaatccttttattgccacctcaggacctggccatatgtctcatgtgccccaacag
aatccaagcatggggccttctttacgacattcagtgcagcaatttcaccaccatcccccc
actgctctccacggagaatcagtagcccacaatcccagattctcccctaatcctcctcag
cagggtgctgttaggccacaaacacttaattttagttctcggggccagacagtaccttca
cctactataaacaactcagggcagtattctcgttatccttacagtaacctaaatcaggga
ttagtaaacaatacagggataaatcaaaatttaggccttacaaataacactccaataaac
cagtctgtaccaaggtacccaaatgctgtagggtttccttctaatagtggtcaaggacta
atgcaccagcagccccttcatcctagtggctcacttaaccaaatgaacacacaagctatg
cacccttcacagcctcagggaacctatgcttctccacctcccatgtcacccatgaaagca
atgagtaatccagcaggtacccctcctccacaggttaggcctggtagtgctggaatacca
atagaagttggcagttatccaaatatgccccatcctcagccatctcaccagccacctggt
gccatgggaattggacagaggagtatgggtcctcggaatatacaacagaatcggccattt
atgggtatgtcttcagcaccacgggaaatgagtggtcacatgagaccaaatggctgttct
ggagttggccttgctgatccacaagcaatacaagaacgactgatatctggtccacagcat
cccagtcagtcatcttttcagcagcaaatgccaacatgtcctcccatgcagcctcatcca
ggcattcatcatcagtcttcaccaccaccacatccccaccatcagccttgggcacagctt
catccatcaccacagaacacaccacagaaagtgcctgtccttcagcattctccatcagaa
cccttcctggagaagtcagtgccagacatgactcaggttagcggaccgaacgcccagcta
ctgaaaagtgatgattatctatcatcgattgagcaacagcctccccagcaaaagaaaaag
aaaaagaaaaacaatcacgttgttgtagaaggtcccaataaaggatttggtaaagaaggc
tttcctggtgggcttgatggccaggatcctaccaggaaattgctagactgttcccaggaa
gagaagaagaaaaagaaaaagcccaaggtaaaaaaagaaccgaaggatccaaaagaactg
aaggagaagaaggagcctaaggaacccaagactcccaaaacccctaagatccctaaagag
ccaaaggaaaagaaagcaaaaaacaccacaccaaaacccaagagcaacaaaaaggcgagt
agcaagaaatcagaatcagaatccagtgcagtgaagaaaaaggttaacaagggaaaagaa
ggtcctgaaaattccgatttggataaaacaccacaaggatcaccacaccctgaggaggaa
gatgatgcaggagttcagaagaggcgctccagcaggcaagtaaaaagaaagcgttatacg
gaagacctggagttcaagatttcggatgaggaggttgatgatgcagatgctgctggaaga
aactctccttcaagtacttctcaatctgagcaacaggagtctgctgatgctgatggccct
gtagttgaaaaaatcatgagtagccgtacagtcaagaaacagatggagaatggcgaggag
gtggaaactgaagaattctatgtaaaatacaaaaacttctcttacctgcactgtcaatgg
gcgtctgtggaagtattggacaaagacaggagaattcagcaaaaaattaaaagatttaag
gcaaaacagggccaaaataagtttctttcagagatcgatgatgaactttttaatcctgac
tatgttgaagtcgatcgaatattggatatttcacatagcaaggatgataatggagagcct
gtgactcattatttggtgaaatggtgttcacttccatacgaagacagcacgtgggaatta
aagcaagacatagaccaggctaagattgaagaatttgaaggaagggcactgtccagggga
gcgggaaaaagaaacgtagtggagcgacctcctgctgatgactggaagaaatcagaatgt
tccagggaatataaaaataacaacaaactcagggaataccagttggaaggagttaattgg
cttcttttcaattggtacaacacgcgaaactgcattttagcagatgaaatgggattgggg
aaaaccattcaatctattacatttctctatgagatatatttgaaaggcatccatggtcct
tttttggttattgccccattgtctacaatccctaactgggaaagggaattccgtacctgg
acagaattaaatgttgtggtatatcatgggagccaagccagccgacggaccattcagtca
tatgaaatgtatttcaaagatcctcaggatcgtgtaattaaggggtcgtacaaatttcat
gccatcattactacatttgaaatgattttgactgattgtcctgagctccgtaacattcca
tggcgctgtgtgataattgatgaagcccacaggttgaagaacagaaactgcaagctattg
gaagggctcaagatgatggacctggaacacaaggtgcttcttacagggactcccctccaa
aacactgtggaagagctcttcagcttgcttcatttcttggaaccgggtcgttttccttca
gaaaccacttttatgcaagaatttggtgatcttaaaacagaggaacaggttcaaaaactc
caagctattctgaagccaatgatgttgagacgtcttaaagaagatgtggaaaaaaacctg
gcccccaaggaagagactattattgaagttgaattgacaaacattcagaagaaatactat
agagccattctcgaaaagaactttacatttttgtcaaaaggtggtggtcaagcaaatgta
cctaatctcttaaacactatgatggaattaagaaaatgctgcaatcatccataccttatc
aatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatcccgactctcca
gattttcagcttcaggcaatgatccaggctgctggcaagctagtgctgattgacaagttg
ctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgc
ttggacatactagaagactacctaattcaaagacggtatccctatgaacgtattgatggc
agagtaagaggaaaccttcgtcaagcagctatagataggttttccagacctgattctgac
agatttgtgttcctactgtgtacaagagcaggtggcttaggaattaatcttacagctgca
gatacctgcatcatctttgattccgattggaatcctcaaaatgatctccaggctcaggct
cgatgtcacaggataggacagagcaaatctgtgaagatttacaggctaataacaaggaat
tcttatgaaagggaaatgtttgacaaagcaagtttgaaacttggccttgataaagctgtt
cttcagtccatgagtgggagagagaatgcaacgaatggggtacaacagctttctaaaaaa
gaaatagaagatcttttgcgtaaaggggcttatggcgctctaatggatgaagaggatgaa
gggtctaaattttgtgaagaagatatagatcaaattcttttgaggcgcacacacacgatc
actattgagtccgagggaaaaggctctacatttgccaaggccagttttgttgcatctggt
aacaggacagacatttctttagatgatcctaacttctggcagaaatgggcaaaaaaagct
gaattggatattgatgccttgaatggacagaacaacctagttattgatacaccaagagta
agaaagcaaactagattatatagtgcagtcaaagaagacgaactgatggaattttcagac
ttggaaagtgattctgaagaaaagcctagtataaaacctcgtagaccacaagacaaatcc
caaggttatgcaagaagtgaatgctttagggtagagaagaatctgttggtttatggctgg
ggacgttggactgatattctcttgcatgggcgctacaaacgccagctaacagaacaagat
gtagaaaccatctgccggactatccttgtgtattgtcttaatcattataaaggtgatgaa
aatatcaaaagtttcatctgggatctgatcactccaactgcagatggacaaacacgagcc
ttggttaaccattctggcttgtctgctccagtacccagaggaagaaagggcaaaaaagta
aaagctcaaagttcacaaccagtactgcacaatgctgactggctagcaagctgcaaccca
gatgccttatttcaggaagacagctataagaaacacctgaagcaccactgtaacaaggtc
ctgctgcgtgtccgcatgctgtactatctgaagcaagaagttataggggaccaagctgac
aagatcttagagggtgctgactcaagtgatgtggatatctggattcctgagccatttcat
gctgaagttcctacagactggtgggataaagaagcagataaatcacttttaattggagtg
ttcaaacatggctatgagaagtacaattcgatgagagcagactcaactctatgttttctg
gaacgtgttggtatgcccgatgccaaggccatagctgctgaacagagagggacagatatg
ttaacagatggtggtgatggaggtgattttgatagagaggatgaggatccagaatataaa
ccaacaaggactccattcaaggatgaaattgatgaatttgcaaactcgccttctgataaa
gaagaatccatagagctccacacaagcaagcacagtgaaagcaatgctgattttggccaa
ctctactggcctaacacttcgaccctgactacccgcttgcgccgcctcattactgcctat
cagcgtagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccggcgc
cggcggcgacctcgtgaagaagtgagagcactcgaagcagaaagagaagctataataacg
gaaaaacgtcaaaaatggacaagacgagaggaagcagatttttatcgtgttgtttctaca
tttggggttatttttgatcctctaaagcaacaatttgattggaaccagttcagagctttt
gcaaggcttgataagaagtctgatgaaagtttggagaagtacttcagctgttttgtggct
atgtgcaggagagtgtgccgaatgcctgccaagccagatgaagagcctcccgatctttca
acagtgatagaaccaatcactgaggagcgcgcttctcgaactttgtatcgcatagagctc
ctgcggaaagttcgagagcaggttcttcatcacccacaattggtggaaaggctaaaacta
tgccagccaagcttggatctaccggaatggtgggaatgtggcaaacacgacaaagattta
ttgattggtgctgctaaacatggagtcagcaggactgattatcacatcttaaatgacccc
gagctctcctttctcgagtctcacaaaaacttcgctcagagcagaggtggaggcagtttg
aatgctatatctttgttaaatccactgggtgtttgctgcagtcaggtgtcctccattgtc
ccatccacaacagcacaagatgaaaagtctgcagaacaaaccgaggttaaactggaagga
ccagaaaaaacagcagccaaagagaagtctgacagtaaagaagaggaggcaccagatatt
gcagtgaaaagtgacaaagagaacggtgatgctgaggctgagcctggtcctgttaaatgt
gaaatgaaagatacagaattgagtacagaagtagacccaaagtctatttctgagaaaggt
tcagaagatgatgaagaagaaaaacttgatgacgatgataaatcggaagagtcatcccaa
cctgaagcaggaacaatttctcagggtaagaattttgatgaagaaagcaatgcatctctg
agcactgcaagggatgaaacgcgtgatggattttatatggaagacggagatccatcagta
gctcagctgcttcaggaaagaacatttgctttttcattttggcctaaggatcgagtaatg
atcaaccgattagacaacatctgtgaagcagtattgaaagggaagtggccagtaaataga
cgccagatgtttgatttccaagggcttatacctggctatacgccaacagctgtggacagc
cctctgcagaaaaggagctttgcagagctctccatggttgggcaagcgaacattagtggc
aatgaagatatcacagtctctcctcaattatctaaggaagatgcactcaatttgtcagtt
ccccgccagcggaggaggagaagaagaaagattgaaattgaggccgaaagggcagccaag
agaagaaatctcatggaaatggttgcccatttgcgagaatcgcaggttgtctcggaaaat
ggacaagaaaaaattgtagacttatcaaaggcctcgcgagaggcaacaagttctacctca
actttttcagctgttccttcaaagtttttattacctaatgtttccacaccagtgtctgat
gcctttaaaactcagatggaactgctgcaagcaggtctttcacgcacacccacaaggcat
cttctaaatggttctctaattgatgtagaaccacccatgaaaaggaggagaggaagaagg
aaaaatgtagaagggctcgatctcttatttatgagcaacaagcaagcatcattggcagca
gaggatgcagaaatgaccaaagtgtttgatgaagaaatggaaactcccccactgagaaac
attccatctcctgggcaactggaccctgatactcgcatccctgtcattaacatagaggat
gggaccaggctggtgggggaggatgctcctaaaaacaaggatttggttgaatggcttaaa
ctgcatccttcttacactgttgatatgccaagttatgtaccaaagagtgcagatgtgctg
ttttccccatttcaaaagccgaagcagaagcggcacagatgtcgaaaccccaataaactg
gatataaacacattaactggagaggagagggtaccagttgtaaataagcgaaacggcaag
aagatgggtggagctatggcccctccaatgaaggacctgcccagatggctggaagaaaac
ccagaatttgctgttgctccagattggactgatatagttaaacagtctggttttgttcca
gagtccatgtttgaccgtcttctcacaggacctgttgtgcgggaggagggagcaagcaga
agagggagaaggccaaaaagcgaaattgccaaagcagctgcagcagctgctgctgtagct
tcaacttcgggaattaacccactgctaatgaacagtctgttcgctggaatggatctcaca
agccttcagaatttacagaacctacagtctctccagcttgcaggtctcatgggcttccct
ccaggactagcgacagctgctgctgctgctggaggtgattctaaaaatccagctgccatg
ctgcctctgatgttgccaggtatggcagggttgcctaacatgtttggactaagtggattg
ttaaataacccaataacagctgcttctggaaacaccactatggcttccagtcaaggagaa
actgaagatggcacttcaaaagtagaagagaagaagaccgaaaatgaagaggagaacaaa
gactccgagaaaagcacagacactgtttctgccactgactctgcaaatggatctgtcagt
gcaactgctgctgcggctgctgccactaccacgaccaacactggattgcctgccaaccct
ctgaccttcaatcctttccttctgtccaccatggctcctggcctgttctatccatctatg
tttctacctccaggactgggaggattgacactacctggtttcccagcattagcaggactt
cagaatgccgtgggctccagcgaagtgaaggttactgataaaactgaaggagctgccttt
aaagatgaagaaaatctagaaggcagcgatgcagaggaaagccttgataaaactgcagat
tcctccgctttagaagatgaaatagcacagggtgaagaattagactcacttgatgggggg
gatgaaatagaaaacaatgaaaatgatgagtaa
DBGET
integrated database retrieval system
