Sphaerodactylus townsendi (Townsend's least gecko): 125439678
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Entry
125439678 CDS
T08213
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04080
Neuroactive ligand-receptor interaction
stow04082
Neuroactive ligand signaling
stow04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125439678
04082 Neuroactive ligand signaling
125439678
04519 Cadherin signaling
125439678
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125439678
Ion channels [BR:
stow04040
]
Ligand-gated channels
GABA-A
125439678
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125439678
NCBI-ProteinID:
XP_048364752
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Position
LG10:complement(22071325..22168459)
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AA seq
554 aa
AA seq
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MVSAKEPASAMPAGLSVTLVHFLCLATCLTALPGQLKKEEKLWPENFTRILDRLLDGYDN
RLRPGFGGSVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLRYDGPIEILRLNN
LMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPM
DGHACPLKFGSYAYPKTEMIYTWTKGPKNSVEVPEESSSLVQYDLLGHTVSNETVKSITG
EYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT
LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKAMKSIPE
FPATLIQRENCAEEAPTSTDSNSNVRKRTNTTVQPEAENVKRIDTGNSSMPLPTVTQGPS
DIMPRSPSASSPNPFSRFSISETLASARATPSAPPSTPVLAGYVPQQATAGSPAIHHLLG
SRLEQIQTTANTLGASAKPSAVNPSPAPPPLSSGTSKIDKYARILFPVTFGAFNMVYWVV
YLSKDTMEKSESLM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgccaaggagccagcgagcgcgatgcctgcggggctgtccgtcaccctcgta
cacttcctgtgcctggcgacctgtctcacggcgctcccgggacagctcaaaaaggaggag
aaattgtggcccgagaatttcacgcgcatcctggaccgtctcctggatggttatgacaac
aggctgcgtcccggatttgggggttctgttactgaagtcaaaacagatatctatgtcacc
agttttggacctgtttctgatgtagagatggagtacacgatggatgttttcttccgtcag
acatgggtggacaaaagattaagatatgatggtccaattgaaatcctaagacttaacaac
ctaatggttaccaaagtatggacaccggacactttcttccggaatgggaaaaaatctgtc
tctcataatatgacggctccaaataaactttttagaattatgagaaatggcaccatcctg
tatacaatgaggctcaccataagcgcagagtgtcctatgaggctggtggatttcccaatg
gatggccatgcttgtcctctgaaatttgggagttatgcgtatccaaagaccgaaatgatt
tacacgtggacaaaaggacctaagaactctgtggaagtccctgaagagtcttccagttta
gttcagtatgacctgcttgggcatacggtatccaatgaaactgttaaatctattacaggg
gaatatattgtcatgacagtgtactttcacctccgacggaaaatgggttattttatgata
cagacctatatcccctgcatcatgactgtgatcctctcccaggtttcattttggatcaat
aaggagtctgttccagccagaactgtttttggaataaccacagttttgaccatgacaact
ctaagcatcagcgcaaggcattccttacccaaagtttcctacgccacagccatggactgg
ttcatcgcggtgtgttttgcatttgtattctctgccctgatcgagtttgcggctgtcaac
tatttcacaaacattcaaatggaaaaagccaaaaggaaggctatgaaatccatccctgaa
tttccagcaactctcattcagagggaaaactgtgcagaagaggcacccacgagtacagac
tcaaattcaaatgtgagaaaaagaactaataccacagtacaaccagaagcagaaaacgtg
aaacgaattgacacaggaaacagttcaatgccactgcctacagtaactcaggggccttcg
gatattatgccccgatccccttcggcatcaagtccgaacccgttcagtcgctttagcatt
tcagaaacattggcttctgcaagggcgacaccttctgcccctccttcaactccagttcta
gctggatacgtccctcagcaagccacagctggatctccagcaatccatcatttgcttgga
tctagactggagcagattcagacaacagcaaatactttgggagcatctgcaaagccgtcg
gctgtcaacccttctccagctcctccacccttaagttctggcaccagtaagatagacaaa
tatgcacgcattttgtttcctgtcacttttggagctttcaacatggtctactgggtggtg
tatctatccaaggacaccatggaaaaatcagaaagtctaatgtag
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