Sphaerodactylus townsendi (Townsend's least gecko): 125439794
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Entry
125439794 CDS
T08213
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125439794 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stow03021
]
125439794 (SMARCA5)
03036 Chromosome and associated proteins [BR:
stow03036
]
125439794 (SMARCA5)
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
125439794 (SMARCA5)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
125439794 (SMARCA5)
RSF complex
125439794 (SMARCA5)
WICH complex
125439794 (SMARCA5)
B-WICH complex
125439794 (SMARCA5)
NORC complex
125439794 (SMARCA5)
BRF complex
125439794 (SMARCA5)
NuRF complex (fruit fly)
125439794 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
125439794
NCBI-ProteinID:
XP_048364976
LinkDB
All DBs
Position
LG10:complement(49642055..49668999)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSTAEQEAENGSSLPAGASVAGTDTAEVIPAAAEGTLGGGGDSGGGDAAAAAEETVDESS
GKQKENQEPDATYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRI
KKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEDSPSYVKWGKLRDYQVRG
LNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSE
FKRWVPTLRAVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVI
DEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDS
WFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKMYVGLSKMQREWYTRI
LMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVV
LDKLLPKLKEQDSRILIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNE
PGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF
ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDS
EITDEDIDGILERGAKKTAEMDEKLSKMGESSLRNFTVDTESSVYNFEGEDYREKQKMAF
TEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEK
EILYYRKTIGYKIPRNPDLPNSTQAQKEEQLKIDDAEPLNEEELEEKEKLLTQGFTNWNK
RDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERG
EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKE
NVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRG
PKPSLAQKRKLDGTPDGRGRKKKLKL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggcggagcaagaggcggagaatgggagctccctccctgccggggcttcagtc
gccggcaccgacaccgcggaggttatccccgccgcggctgaggggacgctcggtggagga
ggcgacagtggaggaggcgatgccgccgccgccgccgaggaaactgttgatgaatcatca
ggaaaacaaaaggaaaaccaggaaccagatgccacatatgaagaaaaaatgcaaactgat
cgagcaaacagatttgagtatctgttgaaacaaacagaattgtttgctcattttattcag
cctgctgcacaaaagactccaacttctcccttgaaaatgaaaccaggacgaccacgaata
aagaaggatgaaaaacaaaatctgctatcagttggagactaccggcatcggaggactgaa
caggaggaggatgaggaactgttgacagaaagttcaaagacaactaatgtatgcactcga
tttgaagattctccatcatacgtgaaatgggggaaactgcgtgattatcaggtccgaggg
ttgaactggcttatttctttatatgaaaatggcatcaatggtatcttagcagatgaaatg
ggtctgggaaagacactgcaaacaatttctcttcttggatacatgaaacactacagaaac
attcctggtcctcacatggtactggttcctaaatcaacgttgcataattggatgagtgaa
ttcaagagatgggtgccgactcttcgagcagtttgtttgataggtgataaagaacagcga
gctgcctttgtgagggatgttttgctgccaggtgaatgggatgtctgtgtaacatcatat
gaaatgctcattaaagagaaatctgtgttcaaaaaatttaactggagatacctagttatt
gatgaagctcaccggatcaaaaatgaaaaatcgaagttgtcagaaattgtaagggaattc
aagactactaacaggttgctgttaaccggaacaccgctgcaaaacaacttgcatgaactc
tgggcacttctaaattttctgttgccagatgtctttaattcagctgaggactttgattca
tggtttgatacaaacaactgtctgggtgaccaaaaactagtggaacggcttcatatggtg
cttcggccattcctcttacggcgtattaaggctgatgtagagaagagtttgcctccaaaa
aaggaagttaaaatgtatgttggtctcagcaaaatgcagagagaatggtatacaaggatt
ttaatgaaggatatagatatattgaactctgctgggaagctggacaaaatgagactgctg
aacattctaatgcagttacgaaaatgctgcaatcatccgtacctttttgatggagcagag
cctggcccaccttacacgacagatatgcatttggttactaacagtggcaaaatggtggtt
ttggacaaactactaccaaaactgaaagaacaagattcacgtatactcattttcagccag
atgacaagagttttggatatcttagaagattattgcatgtggcgaaactatgaatattgt
cgacttgatgggcagacgcctcatgatgaaagacaagcttcgattaatgcgtacaatgag
cctggcagctcgaaatttgtgttcatgttgagcacgcgtgctggtggcctaggaatcaac
ctggccacagctgatgttgtaattctgtatgattcagactggaatccacaagtagacctt
caagctatggaccgggcacatagaattggacagacaaaaactgttagagtattcagattc
attacagataacacagtagaagaaagaatagtagaacgagcagaaatgaagctccgtttg
gattccatagttattcaacaaggaagactagtggatcaaaatctgaacaaattagggaaa
gatgaaatgttgcagatgattagacatggagctactcatgtctttgcttcaaaagatagt
gaaattacagatgaagatattgatggtattttggaaagaggtgcaaagaagactgcagaa
atggatgagaagctctccaaaatgggtgaaagctcactcagaaactttacagtggatacg
gagtccagcgtgtataactttgaaggggaagattatagagaaaagcaaaagatggcgttc
acagaatggattgagccaccaaagcgtgaaagaaaagcaaattatgctgttgatgcttat
ttcagggaagctcttcgagtcagtgaaccaaaagcaccaaaggcaccacgacctccaaaa
caacctaacgttcaggatttccagttctttcctccacgcttgtttgagctactggaaaaa
gaaattctgtattataggaagactattggttacaagattcctcgtaatcctgacttgcca
aattctacccaggcacaaaaggaagaacaacttaaaattgatgacgctgagccccttaat
gaggaagagttagaagagaaagagaagctgttaactcaggggtttactaactggaataaa
agagacttcaatcagttcatcaaagctaatgaaaaatggggccgtgatgacattgaaaat
atagctcgggaagtggaagggaagacccctgaggaagtcattgagtattctgctgtattc
tgggagcgatgtaacgaactccaagatattgagaagatcatggctcagattgaaagaggt
gaagctcgaattcagaggaggattagtattaaaaaagcacttgacactaagattggcaga
tacaaagcacctttccaccagctgagaatatcgtatggtactaacaaagggaaaaactat
acagaagaggaagatcgctttttgatctgtatgcttcacaaactaggatttgataaagaa
aatgtttatgatgaattgagacaatgtattcgtaactctccccaattcagatttgactgg
ttccttaaatccaggactgcaatggagctgcagaggagatgcaatacgttaatcactttg
attgaacgagagaacatggaattagaagaaaaggagaaagcagagaagaagaaacgtgga
ccaaagccatctttggcacagaaacgtaaactggacggtacccctgatggaagaggacga
aagaagaaattaaagctgtga
DBGET
integrated database retrieval system
