Sphaerodactylus townsendi (Townsend's least gecko): 125439817
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Entry
125439817 CDS
T08213
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stow04990
]
125439817 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
stow04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
125439817 (LIMCH1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
125439817
NCBI-ProteinID:
XP_048365036
LinkDB
All DBs
Position
LG10:19613042..19844489
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AA seq
1646 aa
AA seq
DB search
MASPGCQPMEEPSQPPRDSPQPEPALAEAQKWIEQVTGKNFGDKDFRSGLENGVLLCELL
NTIKPGLVKKINRLPTPIAGLDNVALFLRGCKELGLKESQLFDPGDLQDASNRATAKNLD
GSRKLKNVLITLYWLGRTANSSTSYSGATLNLKEFEGLLTQMRKETEDVESPKRNIRDSG
YVDCWDTERSDSLSPPRHCRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLP
HRKIPDMKKDDMSARRTSYGEPKSVVPFNQYLPNKSNQTAYIPAPLRKKKAEREEFRKSW
STATSPLGGERPFSKSHPETIEEEQSEQLAQSEEESLSDGGAPVQTDRSLAATDSFTLSP
AHSANKTAGPRNSEKDPQELGKLRRLEQAGIKIVPAAQRYGSSQTHVCETGDPTPDIILR
KENPFILCYQRKDPGSEDEQEERIPDLEKDDFAVRRAKLNQPKHTLPFSLSLLGPYPKKE
PGKLEEGKKQKTKQETASGNKASSKPMALHEERPFLQPQVDEPKAKGAAEHQSVQVKDRS
QQRSQVTLSQLDLSILTKGSITQEDKETWDRLKVSGKTSDEDLMDTQDYFLSSEKSVEAA
SHNDFAGHKARMCKKATSPRQRVVHFGPVTEIDHQEQEKVSIASAATKDDLEEEANRERA
DTLETSCSGSHVESTGNDETRRPHFDASKITWSNTDADNSPISDVCAGSQKQTSSSLNEW
RESSDEELDGSFPDIERDDMLARRFGTFQKRTSPVHTSYPPVLVAGYHSLKQQGHTDLWK
SSHKPERSSPLTCVTQPFRGTPSPVSVSATVTCEDDHGKSEVHDECKNDPRGDKMGVRNP
GKDDMMVRRTIAFSKQTEPDVRRFLPVPFSKQQNGEATTKQLVKTEQKVKRFGSRTPVSD
DAESVSMFDMRCSDEAAVMQPHSKARHEKLQTIHHQLKEDEDQWQDVSRRRVQVDKPEPF
QVRFGLSPMLAGADGNCKLSRFIAIFLLLFHTREKREKELHEAYKNARSHEEAENILQQY
IERFTISEAVLERLEMPKILERSHSAQPNLTSPPNDPNPLRYLRQQSLPAPKFTARVEAT
IVPTSILEASVSSGRTSPSKPFVSKTLPMLTPKPYSQPKNTQQVLKSFKIDGKVSMNGDT
FNGVEEEKEKECTAFIFAPSPSRSPKPDGVVEADGALEVKPDSSSTELILKRLLEHSQLG
EQTGSLFKEVKQANQKDGMGSEEASPAELTSDRKDFSAAASCAGPTVATVEFSSLSNHSK
EMGSNELKEPEAPGVQKVMPLEAPEQVGSIVYRSLNKTPEMSQAVLQNSTFLANTESNEK
SSRFGGWSWDPEEERKRQQRWQYEQERLLQERYQKEQDKLKEEWERAQKEVEEEERRYHE
EERRIIEDTVAPFMATSNSTEPLSTFSSVTDANGAMNVLDASNSEEIDQQMEDKTSKKGL
CGQEDMPFSKNKEYEGWKENMSINKLGYLEASHPRGSEPDNLTAVLGCKPPTRLTLPLCQ
EVPQTPQLLTKQSPHFSDTRQQTSPSENNLGLPDSSMKEIRRARCQESFRTEPQSPCSLA
VQSQSLNRSVSGRKLCSSCGQTLGKGAAMIIETLSLYFHIQCFRCGICKGQLGDAASGTD
VRIRNGLLNCNDCYIRSRTAGQPTTL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggccagccctggctgccagccgatggaggagcccagccagccgccgcgagactccccg
cagcccgaacccgcgttggccgaagcgcagaagtggatcgagcaagtaacggggaaaaac
ttcggagacaaagactttcggtctggactagaaaatggcgttctgttgtgtgagttgctg
aacaccataaaacctggattggtcaaaaagatcaaccgattgcctactcccattgcgggt
ctggacaacgtcgccctgttcttacgaggctgcaaggaacttggcctgaaggaatcacag
ctttttgacccgggagacctgcaggatgcgtcgaaccgagcaacggccaagaatcttgat
ggtagcaggaagctgaaaaatgttttaatcaccctatattggcttgggagaactgcaaac
agcagcacttcatatagcggagcaacgctgaacctgaaggagtttgagggattgctaacc
cagatgagaaaggagactgaggatgtcgagagccccaaacgcaacatccgtgacagtggc
tatgtagactgttgggacacggaacggagtgattctctttctccccctcgccattgcaga
gatgattcttttgacagtctggattcctttggctctcgctcccagcagacaccgtctcca
gatgtggtgctgaggggaagtagtgatgggagaggaagcgactctgaatctgacctgcca
catcgaaagattccagacatgaaaaaagacgatatgtctgcccggcggacctcctatggt
gaacccaaatcagttgtgccttttaaccaatacctccccaacaagagtaaccagactgcc
tatataccggctcctcttaggaagaagaaagccgaacgagaggagtttaggaagagctgg
agcacggctacttctcctctaggaggagagagacctttcagcaagagccatcctgaaacg
atagaagaagaacaaagcgaacagctggcccaatctgaagaggaatccctgagcgatgga
ggcgcccctgttcagaccgaccgaagcttagctgccacagactctttcactttgtctccg
gctcattccgcaaacaaaacggccgggcccagaaactctgagaaagatccccaagagctc
ggaaagttaagacggcttgaacaggccggtattaaaattgtgccagcggcacaacgctac
ggcagcagtcaaacgcacgtgtgtgagacaggtgacccaactccagacattatcctccgc
aaagagaacccctttatcttgtgctatcaacgaaaggatcctggctctgaagatgaacaa
gaggagagaatccctgatctagagaaggacgattttgctgtgcggagagcaaaactaaat
caacccaaacatacgttgccttttagcctgagtctgctgggaccctatccaaagaaagag
ccaggtaaactggaagaaggaaagaagcagaagacgaagcaggaaacggcaagcgggaac
aaggcttcctcaaagcccatggcgttgcatgaagagagacctttcctgcagcctcaggtt
gatgagcctaaggcaaaaggtgcagcggaacatcagagtgttcaagtgaaggaccggtct
caacagagatcccaggttaccctctctcaactagacttgtcaatacttacaaaaggttct
ataacacaagaggacaaggagacgtgggatcggctgaaagtttcaggaaagaccagtgat
gaggatctgatggacactcaagattattttctatcctctgaaaagtcagtggaggctgcc
agccataatgattttgcaggccacaaagcaagaatgtgcaagaaggccaccagccccagg
cagagggttgtgcattttgggcctgtgacagaaattgaccatcaggagcaggagaaagtt
tccattgctagtgcggcgactaaagatgaccttgaagaggaagccaatagggaaagagct
gacactcttgagacttcatgctctgggagccatgttgagtccactggcaatgatgaaaca
cgtagaccacactttgatgccagcaaaatcacatggtccaatacggatgcagataattca
cccatctcagatgtttgtgccggttcccagaagcaaacatccagcagtttgaatgaatgg
cgtgaaagcagtgacgaagagttggatggtagcttcccagatattgagagagatgacatg
ctggctaggagatttggaacgtttcagaaacgtactagtcctgttcacacgtcttatcct
cctgttttagtagctggttatcattcattgaaacagcaaggacacactgatctttggaag
agttcgcacaaaccagaaagaagttccccgttgacttgcgtaactcaacctttccgtgga
acaccttcccctgtgtctgtaagtgccactgtaacatgtgaagatgaccatgggaaatca
gaagttcacgatgagtgcaagaatgatccaagaggtgacaaaatgggagttagaaatcct
gggaaagatgacatgatggtgagaagaaccatagctttttccaagcaaactgaacctgat
gttagacggttcctgccggttcctttctcaaagcagcagaatggtgaggcgacaaccaaa
cagcttgtaaagactgaacagaaagtgaagagattcggctcaagaactcctgtgtctgat
gacgcagagagcgtgagcatgtttgacatgaggtgctcggacgaggctgccgtgatgcag
ccacatagcaaagctcgccacgagaaactgcagaccatccaccaccaactgaaggaagat
gaggatcagtggcaagatgtgagtaggagacgggtgcaggtagacaaacccgagcctttc
caagtgcgattcggactaagccccatgctggcaggggctgatgggaattgtaagcttagt
cgtttcatagcaatcttccttctgttgttccacaccagagagaagcgcgagaaagagctg
catgaggcatacaagaatgccagatcacacgaagaggcggagaacatcctccagcaatat
atcgagagattcaccattagcgaagctgttcttgagcgcttggagatgccaaaaattctg
gagagaagccattctgcccagccaaacttgacatccccacctaatgacccaaaccctcta
agatacttacggcaacagtcactccctgcccccaaattcactgccagggtagaggcgacc
attgttcccaccagcatattggaagccagcgtttcatcaggccgtacctctccgagcaaa
ccttttgtctccaagaccctgcctatgctgacacccaagccttactcacagcctaaaaac
acacagcaggttttgaaaagctttaagatagatgggaaggtcagcatgaacggagacact
ttcaatggagtagaagaggaaaaagagaaagaatgcaccgcattcatatttgccccttcc
ccaagtcgatcgccaaagcctgacggggtggtagaagctgatggcgctttggaggtgaag
ccagactcctctagcactgagctaattctgaagaggctccttgagcacagccagctcgga
gagcaaaccggctccctgtttaaagaagttaaacaagccaaccaaaaagatggaatgggt
tcagaagaagcatctccagcggagttaacttcggatcgtaaagatttcagcgcagccgct
tcatgtgccggtcctacagtagccactgtggaattctcctccctcagtaaccactccaag
gagatggggtcaaatgaactgaaggaacccgaggcgccaggtgttcagaaggtcatgccc
ttggaagctcctgaacaagttgggagcatcgtatatcggtctctgaacaagactcctgaa
atgagccaagctgttttgcagaattctacctttctagccaacactgaaagcaatgagaag
tcaagccgttttggtggctggtcttgggatcctgaagaagaacggaagcgacaacagcga
tggcaatatgaacaggaacgcttacttcaggaaaggtatcagaaagagcaggacaagttg
aaagaagaatgggaaagggcccaaaaagaagtagaagaggaggagcgcagataccacgag
gaggaacgcaggatcattgaggacactgtggctccattcatggccacttcaaactccacc
gaacccttgtccacgttctcctctgtgaccgatgcaaatggggctatgaacgtgctagat
gcgagcaactctgaagagatcgatcagcaaatggaagacaaaacatcgaagaaagggctt
tgtggacaggaagacatgcccttttcaaaaaacaaagagtatgaagggtggaaggaaaat
atgagcataaataaacttggctatctagaagcaagtcatccgagaggaagtgagccggat
aatctgacagccgtgctagggtgcaaacctccaaccagattgactttgccattatgtcag
gaagtgccacagactccacagttattaactaaacagagcccacatttctcagacacaaga
cagcagacttcaccctcggagaataatttaggtttgccagacagttccatgaaagaaatt
aggagggcacgctgtcaagagagtttccggactgaaccacaatcgccatgttctctggca
gtgcaaagccagtcactcaacaggtctgtcagtggaaggaagctctgctctagctgtgga
cagactctggggaaaggcgcagccatgatcattgagacccttagtctttatttccatatc
cagtgcttcaggtgtggaatttgtaagggtcagcttggagacgcagccagcggcacagac
gtccggattagaaacggtcttctcaattgcaacgattgttacatcagatccagaactgct
ggtcagccaacaactttgtga
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