Sphaerodactylus townsendi (Townsend's least gecko): 125439888
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Entry
125439888 CDS
T08213
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125439888 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stow04990
]
125439888 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
stow04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
125439888 (SYNPO2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Calsarcin
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125439888
NCBI-ProteinID:
XP_048365174
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Position
LG10:65546926..65665614
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AA seq
1274 aa
AA seq
DB search
MGTGDYICITMTGGAPWGFRLQGGKEEKQPLQIAKIRNNSKAAIAGLCEGDEVISINGNP
CADLAYSEVITLMEALTDTLQMLIKRSLSGVNETLSPGNENRDNLNIKNNKYKESTTLQI
RTAMQRPHVELQITGATNEMFQIGQQSAMVESSIAKQEREIAYCHKIPPKVIETPKAQLI
NVPAFSGETGESAVPTLELQLSLSHDRHKDSSVPSLKVLGAEKFKYSETGPNLQQDGSSS
VTPAPTSEKDPSVQHSIRTFQIAPCKEVKAVPEAETKEPSFTKVEVILGCSDREKEASRS
LAEKGCVDSQVEGGQSEAPPSVVSFGISSEGTEQGEDDQNSEREHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELERY
EDEGDEFEGEEESEKDNTFEVTLLGTSESEIDEDLFSDLDKEDRIVTFDWDTGLLEVEKK
PKSLDEMQMLPESKGKGALMFAKRRQRVDQVTAEQDAMKMQAVHSTEGHREVTTTENNSK
FSSSLNQVKQEEASRMQSHVSKSYIEVSRTTIQQNGIGGGPETNMLCQSSEALKSASLNR
TAKPFPNIQNRAAAPFSPTRSMTSPLSDFPPPPPYASASPPPEALYRTALTPVANTAQPA
LWSPTESTEQIASRDERIAVPAKKTGILQEAKRRNTAKPMFTFKDTPKVSPNPALLSLVQ
HSEGKKGAGFESGPEEDYLSLGAEACNFMQIQAAKQKVPPPVAPKPALKVSPTDTTPISP
VWSPPAVAFAQPPAFPAPRSPEEASPAPVKIAQPVYPPPQPPSTLNLAGPFKGPQTAASH
QNFTPKMTPTTPLGNAVLAGGVGPAFEMPPALSGKGAQLFAKRQSRMEKYVVDSETVQAN
MARASSPTPSLPSSWKYSSNVRAPPPVAYNPIQSPSYPLAATKPQSKSSSVAKTTKKKPK
KALSSLEVMKHQPYQLNASLFTFQPPSDKKEVPAPKQPAKFDSVPASRSLNAGSPANIRA
SSVYSVPAYSSQPFFPSNASSPVIESCGSTGYPAFQKQEPAVSSSVATPRPKFSAKKVGV
TAQERDGERSLSLPGWPPSSTLRSMSPVSPVTFQPVPDYYFGKPAPAVDKPGKRLTPWEA
ASKSPLGLVDDAFGPQTIQESIAANVVSAARRKTLPTPPDSWKQKVAYQPPAPNAHAKLA
SFGRSHSAAMSSAKSTMSAPSSTMHCGSRLQYAYYGQRARTDPDMVSMDSRSDYCLSIAD
SNYNPYPKGWRRQT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaggggattatatctgcatcactatgaccggaggggcaccttggggttttaga
ctgcaaggtggcaaggaagaaaagcagcctttacagattgccaagattcgcaacaacagc
aaagcagcgattgcaggactatgtgagggagatgaagttatatctatcaatggcaaccct
tgtgctgacttggcttactctgaagttatcaccctgatggaagctttgactgacacactt
cagatgcttatcaagaggtctttgagtggggtaaatgagaccctcagtcctggaaatgaa
aacagagacaaccttaacattaaaaataacaaatataaagaaagcaccactctgcaaatc
agaacagccatgcaaaggccccacgtggagttgcaaatcacaggggcaaccaacgaaatg
ttccaaatcgggcagcaaagtgctatggtggagtcatctatagcaaagcaagaaagagaa
attgcatattgtcataaaatccctcccaaagtgatagaaaccccaaaagcacaattgatc
aacgtgccagctttctctggagagacgggagaaagtgcagttcctacattggagctgcag
ttgtccctgtcgcatgacaggcacaaagacagcagtgttcctagtctaaaagttctgggg
gctgaaaagttcaagtattcagaaacaggacccaaccttcaacaagatgggagcagctcg
gtgactccagctcccacttctgaaaaagacccatctgtccagcactcaatccgaacattc
cagattgctccttgcaaagaggtcaaagcagtgccagaagctgagacaaaggagccatct
ttcactaaagtggaagtgatcctaggctgttctgacagggagaaggaagcatcccggtcc
ctggctgaaaaggggtgtgtagattctcaagtggaaggagggcagtccgaagcacctcct
tctgtggtctcctttggaatctcatccgaaggcacagagcagggagaagacgaccagaac
tctgaaagggaacatagcagacctcacaaacaccgggcaaggcacgccaggctcagacga
agtgagagcctgtcagaaaagcaggtgaaagaagccaagtctaaatgtaagagcattgcc
ctattgctgacagcggctcccaatcccaactccaagggggtgttgatgttcaagaagcgt
cgccaaagagccaggaaatacactttggtcagctacggcactggagagctagagcgctac
gaggacgagggtgacgaattcgagggtgaagaagaaagcgagaaagataacacttttgaa
gtaaccttacttggcactagtgagtcagaaatcgatgaagatttattctctgaccttgac
aaagaagaccggattgtgacatttgactgggacactggtctccttgaggttgagaagaaa
cccaaaagtctggacgagatgcagatgcttccagagagcaaaggcaaaggggcgctcatg
tttgccaaaagacggcaaagggtggatcaggtaacggctgagcaagatgcaatgaagatg
caggctgtgcatagtactgaggggcaccgagaggttactacaacagagaacaactccaaa
tttagctcctccttaaaccaggtaaaacaggaagaagcttcgagaatgcagagccacgtg
agcaagagctacatagaagtgagccgcacaacaatacaacaaaatggcattggaggaggc
cctgagacaaacatgttgtgtcagtcttctgaagcccttaaatcagcaagcttaaacaga
acagcgaaacctttcccaaacatacagaacagagcagcagcacccttctcacccaccaga
agcatgacaagccctctctcagattttcctccaccccctccttatgcttcagcaagccca
ccacctgaagccttatacagaactgctttgactcctgttgccaacacagctcagccagct
ttatggtctccaacagaatccacagagcagattgcatcccgggatgaaaggattgctgtg
cctgccaaaaaaactggaatcttgcaagaggcaaagagaaggaacactgcaaaacctatg
tttactttcaaagacacgcccaaagtgagtcctaatcctgcccttttgtcccttgtgcag
cattcagaaggcaaaaaaggtgctggcttcgaatcaggtcctgaagaagactacctcagt
ttgggagcagaggcctgcaatttcatgcaaatccaggcagccaaacaaaaggttcctcct
ccagtagctccaaaacccgcactaaaggtttctcctactgacacaacacctatttcaccg
gtctggtcacctccggctgttgcttttgcccagccacctgcttttccagctccaagatca
cctgaagaggcaagtccagcacctgtcaaaatagcacaacctgtttatccccctccacag
cctccaagtactcttaacctagctggtccttttaaagggcctcaaacggctgcatcacat
caaaactttacaccaaaaatgacacccaccacaccactaggaaatgctgtccttgcagga
ggagtggggccagcttttgagatgcctccagcgttgagtgggaaaggagcacagctcttt
gccaaaagacaatcacggatggaaaagtatgtagtggactcagaaactgtgcaagccaat
atggcccgggcatcatcacccaccccatctttgccatcttcctggaaatattcatctaat
gtccgagccccaccaccagtggcttataaccccatccaatccccatcgtatcctcttgct
gccaccaaaccacagtcaaagtcatccagcgttgccaaaactaccaagaagaaacctaag
aaagcacttagctctttggaggttatgaagcatcagccataccagctcaatgcgtcctta
tttacttttcagcctccctctgataaaaaggaagtcccagctcctaagcaacctgccaag
tttgactcagtgcctgcttcaagatcacttaatgctggttctccagctaacatcagagca
tcttcagtgtactctgttccagcctacagttcacagcctttcttcccgtcaaatgcctct
agccctgtaatcgagtcctgcggatcaacaggttaccctgcttttcagaagcaagaacca
gcagtatcctcttcagttgctactccaaggccaaagttttcagccaagaaagtcggtgtt
acagcacaggaaagagatggagaacggtccttgtcacttcctggatggccaccttcttcc
actttgcgatccatgtcccctgtttctcctgtgacgttccaaccagttcctgattattat
tttggcaaaccagctccagcagttgacaagcctgggaagaggttgactccttgggaagca
gcttctaagtcccctcttggccttgtggatgatgcctttggccctcaaaccatccaagaa
tccattgctgcaaatgtcgtttcagctgctcgcaggaaaacactgcccacacctccagac
agctggaaacaaaaagttgcttatcagcctcctgctccaaatgcccatgctaaattagct
tcatttggaagaagccattcagcagccatgtcctctgcgaagagcacaatgtctgcgcca
agttccaccatgcattgtggctctcgacttcagtatgcctattatggtcaacgagcccga
actgatcctgatatggtctccatggattccaggtctgattactgtctgtcaatagctgat
tccaactataatccatatccaaagggatggaggcgtcaaacatga
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