Sphaerodactylus townsendi (Townsend's least gecko): 125439912
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Entry
125439912 CDS
T08213
Name
(RefSeq) huntingtin-like
KO
K04533
huntingtin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125439912
04131 Membrane trafficking [BR:
stow04131
]
125439912
03029 Mitochondrial biogenesis [BR:
stow03029
]
125439912
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125439912
Membrane trafficking [BR:
stow04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125439912
Mitochondrial biogenesis [BR:
stow03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125439912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_bridge
Htt_C-HEAT
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
HEAT_2
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
125439912
NCBI-ProteinID:
XP_048365213
LinkDB
All DBs
Position
LG10:complement(2474042..2568740)
Genome browser
AA seq
2277 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQSPAASAAAAAAPPPEEPPQRPKKDLSTTKKDRVNHCLTIC
ENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQ
LELYKEIKKNGASRSLRAALWRFAELAHLVRPLKCRPYLVNLLPCLTRVCKRSEESVQET
LAAAIPKIMSAFGNFANDNEIKALLKTFVTNLKSSSPTIRRTAAASTVSICQHSRRTQYF
YTWLLNVLLGLLFPIEDEYPTVLILGVLLTLRYLIPLLQQQVKDTSLKGSFGMIRKETEI
SPSLSQLIQVYELTLRYARHRDHNVVTGALELLQQLLRTPPPDLLLALTTAGGLTQVGVS
EDEASSRNRSDSIAELIAGGGSSCSPVFPRKPKAKVVLGEEDGLEDEAEARSEVSSTDFA
ASMKSELTGDLASSSGVSTAGSAMSSVTDSSDRDIITEQPRSQHTLQPESDLASCDLTGA
AVKGDAEDDLLSGSSSQVSAAPSDPVVDVDGGTQASSPLSDSSQTTTEGPDSAVTPDSSD
MILESAENQYSGMQIGQLQDEEDEATNVLQEEDPFRNSCLVLQQSHLSTMGHSRQPSDSS
MDRFSSKEETEPGEHENKLSRIKGDIGHYTDENAAPLVHCVRLLSASFLLTGEKGVRVPD
KDVRVSVKALAVSCVGAAVALHPEAFFSKLYKTPLEAREEECEEQYVSDIVNYIDHGDPQ
IRGATAILCGTIVCSILTKSRFDVENWLASIATSTGNSFSLVDCIPLLQRTLQDASSVTC
KLTCTAVRHCIMSLCSSSYSALGLQLIVELLTLRNSSYWLVRTELLETLAEIDFRLISFL
EGRASRLHRGAHHYTGLLKLQDRVLNNVVISLLGDEDPRVRHVAAASLIRLIPQLFYCCD
QGQADPVVAVARDQSSVYLKLLMHETPPASHIAVSTITRTYRGYNILQNPTDVTMENNLS
RVISAVSHALTTSSTRSLTFGCCEALCLLSTSFPVCTWNAGWHCSFSTAGSPEEHQRSCA
VGMAGLVLSLLSSAWFPLDLSAHQDALILVGNLLAASSSKSLKTAWTTEEDSSAGAAKQE
EPWPALADRTLVVLVEQIFSHLLKIINICAHVMDDIAPGPAVKATLPSLTNPPSLSPIRR
KGKEKEVAEQTSVAMSPKKSTENSPAPRQMDASGPTPTSKSSLLGNFYHHPSYLKLYDVL
KATHANYKVTLDLQNSTEKFGGFLRSALDVLSQILELATLQDIGKYVEEILGYLKSCFNR
EPMMATVCVQQLLKTLFGTNLASQYDCLSSNPRGSQGKAQRLGSSNLRPGLYHYCFMAPY
THFTQALADASLRNMVQAEQEHDASGWFDVLQKVSAQLKTGMTSAAKHRADKNIIHNHIR
LFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLRQFEYIE
VGLFRGSEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQ
PIVHDLFILRGANKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILILQQCHKENEDKW
KRLSRQIADIILPKLAKQQMHIDSHEALGVLNTLFEILAPSALRPVDMLLRSMFVTPSTM
VSVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCVTINKLRNHENVTPT
EEQIVEEQHKYLPEETFSRFLLQLVGILLEDITTKHLNVDMSEQQHTFYCQELGTLLMCL
IHTFKSGMFRRITAAATRLFTEDGSSDGFYTLESLNALVQSMIPTHPSLVLLWCQILLLV
NYTNCTWWSEVHQTPKRHSLSCTKLLSTQIAEGNEESHSESKLGMCNREIVRRGALILFC
DYVCQNLHDSEHLTWLIVNHVQDLISLSHEPPVQDFISAIHRNAAASGLFIQAIQSRCEN
FTAPTTVKKTLQCLEGIHLSQSGAVLMLFVDRLLCTPFRVLARMVDTLACRRVEMLLAAM
QQNTIAQLPLEELDRIQEYLQSSGLAQRHQRLYSLLDRFRLTVALDTVSPPPCVTSHPLD
GESQPTLETVTPDKDWYVSLVNSQCYTRSDSSLLEGAELVNRLPQPDLNSFMIHKDFNIS
LLAPCLSLGMQELSRDQKNLFETARRVTLAHVTAAVQKLPISHQVFQPLQPIETSVYWNK
LSDIFGDTVFYQSTMVLSRALSQYLVLLPKLPASLRIPHDKESDILKFVAMSVEILSWHL
IHKHIPLSIDLQAVLDCCCLMLQQSCLWNLLASALYMTHACSLINCVRFIIEAGKLA
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctcatgaaagccttcgagtccctccgctccttccagcagcag
agccccgccgcctcagccgccgccgccgccgcccctcctcctgaggagccgccccagagg
ccaaagaaagacctttctaccaccaagaaagatcgagtgaatcattgcctaacaatatgt
gaaaatatagttgctcagtctctaagaaattctccagagtttcagaaattgctgggcatt
gctatggaactttttttgctttgtagcgatgatgcagaatcagatgtaaggatggttgct
gatgaatgtctcaataaagttatcaaggctttgatggattctaacctcccaaggttacag
ttggaactctacaaagagattaaaaagaatggtgcttctcgaagtttgcgtgctgccctt
tggaggtttgctgaacttgcacatcttgttcgccccctaaaatgccggccatacttagta
aacctgttaccctgcctaacacgggtgtgcaagaggtctgaagaatcggtacaagagaca
ctggctgcagcaataccaaaaatcatgtcagcttttggaaactttgcaaatgacaatgaa
atcaaggctttactgaagacttttgtgactaacctgaagagcagttctcctaccatccgt
cgaacagcagctgcatccactgtgagcatctgccaacattcacggaggacacagtatttc
tacacttggctgttgaacgtcctgctaggtttattgtttcccatagaagatgaatatcct
actgttttaattcttggagtgttgctcaccctaaggtatctgatacctttactgcagcag
caggtgaaagatacaagtctgaaaggtagctttggcatgatacgaaaagagactgagatt
tccccttccttaagtcaacttatacaggtttacgaactgaccctacgttacgctcggcac
cgggatcataatgttgtgactggtgctttagaattactacaacaacttctcagaacacct
cctcctgatctccttctggcattgaccacagcggggggtctgactcaagtcggcgtgtcc
gaggatgaggcttccagcagaaaccgcagtgatagcatagcggaacttatagccggaggg
gggtcttcatgcagccctgttttccccagaaaaccaaaagctaaagttgttttaggggaa
gaagatggcttggaagatgaagctgaagcaagatctgaggtcagcagcactgattttgca
gcttccatgaaaagtgagctgactggcgacttggcttcttcgtcaggtgtgtccacagca
ggatctgccatgagttcggtgactgattcctctgaccgagacatcataactgagcagcca
cgctctcagcataccttgcagccggagtcagacttggccagctgtgatttaactggtgca
gctgtcaaaggagatgctgaggatgaccttctgagtggcagctccagccaagtcagtgct
gccccatcagaccctgtagtggatgtggatgggggcactcaggcctcctctcccctcagt
gacagctcccagacaacgacagaaggtcccgattcagccgtcacgccagacagttctgac
atgattttagagagtgctgaaaaccagtattctggcatgcagattggacagctgcaagat
gaagaagatgaagctaccaatgtcctccaggaagaggatcctttcagaaattcttgtctt
gttcttcagcaatctcatttgtctactatgggccacagtagacagccatcggacagcagc
atggacagattttcatcaaaagaagaaacagagcctggtgaacatgaaaataagctctcc
agaataaaaggtgatataggtcattatactgatgaaaatgctgctcctctagtccactgt
gtgcgcctcctctcagcctcttttctgcttacgggagagaaaggtgtgcgggtgcctgac
aaggacgtccgggtcagcgtcaaagccttagcggtgagctgcgtgggagccgctgtcgct
ctccaccctgaagccttcttcagcaagctgtataagacgcctctcgaagctagggaagaa
gagtgtgaagagcagtatgtgtctgatattgtgaattatattgatcatggagatcctcag
atcagaggagcaactgccattttatgtggaacgattgtttgttccattctcacgaaatct
cgctttgatgtggagaactggctagcaagcatcgccacttcaactgggaacagtttctcc
ctagtagactgtatacccttgctacaaagaactctgcaggatgcatcttctgttacgtgc
aagttgacttgcacagctgtaaggcattgcatcatgagtttgtgcagtagcagctatagt
gctttaggtttacaattaatagtcgaactccttacattaagaaatagttcctattggctg
gtgaggactgaactgctggaaactttggctgaaattgattttcggttaatcagttttctc
gaaggtagagccagccgcttgcacagaggggctcatcattatacagggctcttaaaactt
caggatcgtgtgctcaataacgtcgtcatttctcttcttggcgatgaggaccccagagtg
cggcatgttgctgccgcttctttaataaggcttatccctcaactgttctattgttgcgac
caaggtcaagcagaccctgtggtggcagtggcaagggaccaaagcagtgtctatttgaaa
ttactgatgcacgaaaccccgcctgcttctcacattgctgtaagcaccatcaccagaact
tacagaggatataacatactacaaaacccaacagatgttacaatggagaacaatctttcc
agggttatttcagcagtttcccatgctttgacgacctcatccacaagatctcttacattt
ggctgctgtgaagctttgtgtctcctgtccacatcgtttccagtttgtacctggaatgca
ggttggcattgcagcttctcaacagcaggttctccagaggaacatcaaaggagctgcgct
gttggaatggctggtttggttctttccctcctttcatctgcgtggttcccactagatctc
tctgcccatcaagatgctttgatattagtgggaaacttgcttgcagctagttcttcaaaa
tctctgaaaaccgcctggaccactgaagaggacagcagtgctggtgctgctaagcaggag
gagccttggccagctctggctgatcggactctggttgttttggtggagcagattttttct
cacttgctgaagatcattaatatttgtgctcatgtgatggatgacatcgcacctggccca
gccgtaaaggcaacgttaccatccttaacaaatccaccttctctgagtccaattcgacgc
aaaggaaaagagaaggaagttgctgagcagacatctgtagcaatgagccctaaaaaaagc
actgaaaacagcccagctccaagacaaatggacgcttcaggcccaactccaacaagcaaa
tcgtcactactgggcaacttttatcaccacccttcctatctgaagctatatgatgttttg
aaagcgacccatgccaactacaaggttacactggatctacagaacagcacggagaagttt
ggtggcttcctgcgatctgccctggatgttctttctcaaattttagagcttgcaactctt
caagacattggaaaatatgttgaagaaattttgggttacctgaaatcctgtttcaacaga
gaaccaatgatggcaactgtgtgtgtgcagcagctgctaaagacattgtttggcacaaat
ttggcttctcagtatgactgcttgtcttcaaaccccagaggatctcaaggcaaagcacag
cgcttgggctcctccaatctgagacctggcctttatcattattgcttcatggcaccttac
acacattttactcaagccctggctgatgctagtttaaggaatatggtacaggccgaacag
gaacacgatgcttctggctggtttgacgtattgcaaaaggtgtctgcacaattgaaaacc
ggcatgaccagtgcggcgaagcatcgtgctgacaagaatattattcataatcacattcgt
ttgtttgagccccttgttatcaaagcattgaagcagtacaccacaacaacttctgtgcag
ctgcagaggcaagttctggatcttcttgcacaactggttcaattacgcgtcaactactgc
cttttggattctgaccaggtattcattggatttgtgctaaggcagtttgagtacattgaa
gtgggactgttcaggggatcggaagccattattcccaatatatttttcttcctggtccta
ttgtcttacgagcgctaccactccaaacagatcattggaattcctaaaattattcaactc
tgtgatgggataatggcaagtggaaggaaagctgttactcatgccattccagctctgcaa
cccattgttcacgatctctttatactaagaggagcaaacaaagctgatgctggcaaagaa
ctggaaacgcaaaaggaggtggttgtttcgatgttgctgaggcttatacagtaccatcag
gttcttgagatgttcatcctcatactccaacagtgtcacaaggagaatgaagacaagtgg
aaaagattgtctcgacagattgcagacataatcctcccaaagttagcaaaacaacagatg
catatagattcgcatgaagctctgggggtcctgaatactttatttgaaatactagcacca
tcagccctccgcccagtggatatgcttttgcggagcatgtttgtcactcccagtacaatg
gtctctgtgagcactgtccagttgtggatatctggcattctggctattcttcgggttttg
atttcacagtcaacagaagacatcgttctctctcgtattcaagagctgtctttttcaccg
tatttgatctcatgtgtaacaattaacaaattaagaaatcatgaaaacgtaactccaact
gaagaacaaattgtggaggagcagcataaatatctacctgaagagacattttccagattc
ttgttacagctggtgggtattctgttagaagatattaccaccaagcacctgaatgtggat
atgagtgagcagcagcatactttctattgccaagagttgggcacactgcttatgtgttta
attcacaccttcaagtcaggcatgttcagaagaatcactgcagcagccaccaggcttttt
acagaagatggatcatctgacggcttctatacccttgaaagcttaaatgctcttgtgcag
tccatgatccccacgcatccttctttagtactcctgtggtgtcaaatcttgctgcttgtt
aattacaccaactgcacctggtggtcagaagttcatcagactccaaagaggcacagcctt
tcctgtactaagttgctcagcactcagattgccgagggcaatgaagaatcacattctgaa
tcaaaacttggtatgtgcaatcgagagattgttcgaagaggggcactcattcttttttgt
gattatgtgtgccaaaatcttcacgattctgaacatttgacctggctgatcgtgaatcat
gtccaggatcttattagcctctctcacgagccaccagtgcaagacttcattagcgccatt
cacaggaatgcggctgccagtgggcttttcatccaggctattcagtcacggtgtgagaac
ttcacagctccaaccacagtgaagaagaccttacagtgtttagaagggattcatctcagc
cagtctggtgctgtgctaatgctgtttgtggacagacttctgtgcaccccgttccgtgtg
ctggctcgcatggtggacaccctggcttgccgaagagtggaaatgcttttagctgcaatg
cagcagaacaccattgctcagttaccacttgaagaactggacaggattcaggaatacctt
caaagcagtggactagcacagagacaccaaagactctactcgctcttggataggtttcgc
cttacggtcgccttagacacagtgagcccgccaccctgtgtcacttcacacccattggat
ggagagagccagccgaccctggaaacggtcactccggacaaagactggtatgtttcacta
gtgaattcacagtgctacacgagatcagactcctctctgctagaaggtgcagaacttgtg
aatcggctccctcaaccagatctcaattctttcatgatccataaggactttaatataagc
ctcctagctccatgtttaagccttggcatgcaggaactctccagggatcagaagaatctt
tttgaaacagcccggagggtgactcttgctcatgtgactgctgcagttcaaaaacttccc
atcagccatcaagtctttcagccattacaaccaattgaaacatctgtatactggaacaag
ctgagtgatatctttggtgacacagtgttttatcagtctacaatggtcctgtcgcgtgct
ttaagtcagtatctggtgttacttcctaaactgccagcctctctccgcattccacatgac
aaagaaagtgacattctgaaatttgttgcaatgtctgtagagatactttcatggcacttg
atacataaacatattcctttgagtattgatctccaagctgtgttggattgctgctgcctg
atgttacaacaatcctgtttgtggaacttgctggcttcagccctgtacatgacccatgca
tgctccctgatcaactgtgtacggtttattatagaagcaggtaagttagcctaa
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integrated database retrieval system
