Sphaerodactylus townsendi (Townsend's least gecko): 125440203
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Entry
125440203 CDS
T08213
Symbol
USP38
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stow01002
]
125440203 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125440203 (USP38)
Enzymes [BR:
stow01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125440203 (USP38)
Peptidases and inhibitors [BR:
stow01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125440203 (USP38)
Ubiquitin system [BR:
stow04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125440203 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125440203
NCBI-ProteinID:
XP_048365847
LinkDB
All DBs
Position
LG10:complement(49823652..49838803)
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AA seq
1066 aa
AA seq
DB search
MDKILEGLVSSSHPLQLKRVIVRRVVESAETPLSGPQCRAMFALSTRLILQGPDHFQRQV
GRQVLEAYARHHRDDFEAFFTRGLVLALLQGGGPASPSLAPMCATPGLGASLDPAVLDYI
QAGLRLLISCPAVLELFALLQEEALRLVGERPSAPLCARLCQLLGDFPQCLPRGRKAALA
FCQQLVRSIAHFQTQGTREAELRLCVAQVTQVSGLLRSMWKAEPDTLLPSLQELFAIISS
TDTSFEPSVALASLVQHIPLQMITVLIGSLTTDPNVKDASMTQALCRMIDWLSWPLAQHV
ETWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPCALAVLSHMLLSFQHSPE
AFHLIVPHVVKLVKSFKSKGPPSSATFLEQLSELIHCMMYHYSGFPELYEPILEAIKDHP
KPNEEKIKMILNQSAWTSQSNSLQSCLSRFSGKSETGKTGLINLGNTCYMNSVIQALFMA
TDFRRHVLSLNLNGCNSLMRKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCS
EYLRFLLDRLHEEERTLRALTSSKLQDDMNEESLVQEVSSKTQKFTKPPCTGTEDRTLIE
KIEQRKSCAGFSETHSCCLKRESSCTEERCRDVLALAFCPPIFLKKFFDARGLERSEGLD
DSLGAGDSIGVARCPKWVETVKCELRVSREAVQVDGLLKDVPIDSGCNISTEPFFSLQSX
RHRAGFCGYIIEASLPSVTEFAEFKSAASAXSRQGDNQLLSVCEKCASLQNAEKTMQIVE
EPEYLILTLLRFSYDPKCHIRRKILDNVSLPLTLELPVKRTLPSLGQVSGMWSAGLEFSD
TGENLAKKLKPSGAEEVCCPQLVPYILSSVVVHSGISSESGHYYSYARNVASSAPSLGPC
DQAKGLALAYPQSNLMAGEAPIAAVEKDLDENEVSKEWFLFNDSRVTFTSFQSVQKITSR
FPKDTAYVLFYKKQNSANVLGTKSPNGLWVNGDPPLQKDLMDAITKDNKLYLQEQELSAR
TQALQAAAASCSFRPNGFDDSDPPGSCGPTGGGGGGGFSTISRLVF
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggaggggctggtgagctcgtcgcacccgctgcagctgaagcgcgtg
atcgtgaggcgcgtggtggagtctgccgagacgccgctgagcgggccgcagtgtcgggcc
atgttcgcgctcagcacccgcctcattctgcaggggcccgaccacttccagcgccaggtc
gggcggcaggtgctcgaggcctacgcccgccaccaccgcgacgacttcgaggccttcttc
acccgcggcctggtgctggccttactccagggaggaggcccggcgtccccctcgttggct
ccgatgtgtgcgacccccggcctcggggccagtctcgacccggccgtgctggactacatc
caggccggcttgcgcctcctcatcagctgcccggcggtcctggagctcttcgcgctgttg
caagaagaagcgttgcggctggtgggcgagaggccctccgctcccctctgcgcccgcctt
tgccagctgctgggcgatttcccccagtgtctgcctcgcgggaggaaagccgccctcgcc
ttctgccagcagctggtgcgcagcatcgcccacttccagacgcagggcacccgcgaggcc
gagctgcgcctctgcgttgcccaggtcacccaggtcagcggccttctgcgcagtatgtgg
aaggctgagcccgacaccctgctgccctccttacaggaactctttgccatcatctcgtct
acggatacttcatttgaaccttctgttgccctggcaagtcttgtgcagcatattccatta
cagatgattacagtactcattgggagccttacgacagacccaaatgtaaaagatgcaagt
atgactcaagctttgtgcagaatgattgactggctttcttggccgttagctcagcatgtg
gagacctgggtgattgcactgttaaaaggcctggctgcagtccagaagtttactatcctt
attgatgttactctgcttaaaattgaactggtttttaatcgactctggtttcctcttgtg
agaccttgtgctttagctgtcctttctcacatgttgcttagttttcagcattctccagag
gcttttcacttgattgttccacatgtggtcaagcttgtaaaatccttcaaaagcaaaggc
ccaccttccagtgcaacttttctggaacagctgagtgagctcatacactgtatgatgtat
cattactctggattcccagaactctatgaacctattttagaagctatcaaggatcatccc
aaacccaatgaagagaaaattaagatgatactgaatcagagtgcctggacttctcaatcc
aattccttgcaatcttgtttgtctagattttctggaaaatctgaaactggaaagactggt
ctgattaacttgggaaatacctgttacatgaacagtgtgattcaggcattattcatggct
acagatttcaggagacacgtgctgtctttaaatctgaatggatgcaattccctgatgaga
aagctgcaacatctttttgcatttttggctcatactcagagggaagcatacgctcctcgg
attttctttgaggcttcaaggccaccttggttcacccctagatcccagcaggattgctct
gaatacctcaggttcctgctagacaggcttcatgaagaagagagaaccttgagagctctg
acttcatcaaaacttcaagatgacatgaatgaagaatcactggtgcaagaagtgtccagt
aagacgcagaagtttaccaaaccaccctgtacaggaacagaagatagaaccttaatagaa
aagatcgaacagaggaaaagctgcgctggcttttctgaaacgcactcatgctgtttaaag
cgcgaaagtagctgtacggaagaacgctgcagggatgttttggcgcttgctttttgtcct
cctatattcttgaagaaattttttgacgcacggggtttagaaaggtctgaagggctcgat
gatagtctgggtgctggggattcgataggggttgctcgatgtccaaagtgggtggaaaca
gttaaatgcgaacttcgagtaagcagagaagccgtgcaggttgatggactattgaaagat
gttcccattgactccggctgcaatatttctacagaaccttttttttcattgcaaagctga
agacaccgggctggattttgcggctacattattgaagcttcacttccttctgttactgaa
tttgctgagttcaaaagcgctgcaagcgcctgaagtcgccagggagacaaccagctctta
tcagtgtgtgaaaaatgtgcctctctacagaatgcagaaaaaactatgcaaattgtggag
gagccggaatacctcattctcacactgttgagattctcatatgaccccaagtgtcacatt
aggcgcaaaatcttagataacgtgtctttgccacttactctggagttgcctgttaaaaga
actctgccatccctggggcaagtatcaggcatgtggtctgcagggcttgagttttctgac
actggtgagaatctagctaaaaaactcaaaccttctggtgctgaagaagtgtgttgtcct
caactcgtcccctatatattaagttctgtggttgtgcactctggcatatcttctgaaagt
ggacattattactcttatgcccgaaatgttgctagttcggcaccctcattaggaccatgt
gatcaagctaaaggtctggcgttagcttatccacaaagtaatttaatggctggagaggct
ccaattgcagcagttgaaaaggacctggatgaaaatgaggtgtcaaaggagtggttttta
tttaatgacagcagagtgacatttacctcatttcagtcagtacagaaaattacaagccga
ttccccaaggatactgcttatgtgttgttttataagaaacagaacagtgcaaatgttctt
ggcactaaatcacccaatgggctttgggtcaatggcgatcctccacttcaaaaagatctt
atggatgctattacaaaagataataagttatatttacaggagcaagagcttagtgctcga
acacaggcccttcaagcagctgcagcttcatgctcctttcgaccgaacggatttgatgac
agtgatcccccaggaagctgcggaccgacaggtggaggaggcgggggaggatttagtact
atcagccgattagtgttctga
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integrated database retrieval system
