Sphaerodactylus townsendi (Townsend's least gecko): 125440276
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Entry
125440276 CDS
T08213
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125440276 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125440276 (HERC3)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125440276 (HERC3)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
HECT type E3
125440276 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
125440276
NCBI-ProteinID:
XP_048365972
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All DBs
Position
LG10:complement(74780704..74842662)
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AA seq
1051 aa
AA seq
DB search
MMLCWGYWSLGLPGAGSSFQAIIPEPQSCGFIHERNVKEVACGGNHSIFLLEDGQVYTCG
LNAKGQLGHEREGNKPEQICTLADQHIIHVACGEAHSVALSNQGQLFSWGAGSDGQLGLT
TTEDSVAVPRLIKKLNQETILQVSCGNWHCLALAADGQFFAWGQNNHGQLGLGKEFPSQP
SPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDQRDRESPCHVKLL
RSQMVVYISCGNDHTAVLTKSGGVFTFGAGSFGQLGHDSLNDEVNPRRVLELMGSEVSQI
ACGRQHTLAFVPSSGIIYAFGCGIRGQLGTGHTCNLKCPSPVKGQWVTYNEQYLGITDPY
KYYIVQRIFSGGDQTFVLCSERENSVPADDFRAINQSDYTCSINDETIDMWRHKLSERNN
PNSVNEVGQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTKVTFDKLMTSQHSILL
DQVLKSFESFLIPQLPSSPPDVEAMRIYLILPEFPPFQDSKYYVTLTLPLAMAILRLDRN
PSKVLDNWWSQVCPTYFLRLVDLYKGAVVYLLHGKKTLLIPVLYSSYITAALRLLEKLHK
VNQKVKHVEYDKFYIPEISNLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDA
QAKTKMLQTDAELQMQVAISGANLQNVFMLLTLEPLLARSPFLVLHVRRSKLVGDALREL
SIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTFYSESNLLWFSD
TCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVEPCLEDLKELSPTEGRSLQ
QLLDYPGEDVEETFCLCFTICRESYGVAEHKNLVPGGDKIPVQKENRQEFVDAYVNYIFN
LAIQEWYAAFSSGFLKVCGGKVLELFQPTELRAMIVGNSNYNWKELEESAAYKGEFSATH
PTVKMFWETFHDFPLEKKKKFLLFLTGSDRIPIYGMSSLRIVIQSTTSGEEYLPVAHTCY
NLLDLPVYSTKEILNIRLTQAIDHYEGFSLA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgatgttatgttggggatattggtctttgggacttcctggggccggcagcagtttccag
gcgatcatccctgagcctcagagctgtggtttcattcatgagaggaacgtcaaagaagtg
gcttgtggtggaaatcattctatttttcttctggaggatgggcaagtctacacgtgtggc
ttaaatgccaaaggacaactcggccatgaaagggagggaaacaagccagagcaaatatgc
actctagcggatcaacacatcatccacgttgcctgtggagaagctcacagtgttgccctc
agtaaccaagggcaacttttttcctggggcgccgggagcgatggccagctaggactaact
actacagaggattcagtggctgtcccaaggttaatcaagaagctgaaccaagagacgata
ctgcaggtctcctgtggcaactggcactgcctcgcccttgcagctgatggacagtttttt
gcatggggacagaacaaccacgggcagctcgggctgggaaaagaattcccctcacaaccg
agtcctcagcgtgtcaagtcacttgacgggatcccattggcacaagtcgctgcgggagga
gcacatagcttcgccctgtctctctcaggagctgtgtttggttgggggaaaaatagctcg
ggacagttgggactgagcgatcaacgagatcgggaatctccatgccacgtgaagctctta
cggtctcaaatggtcgtctatatcagctgtggaaatgaccacacggctgtcctcaccaag
agtggtggcgtgttcacctttggggcaggttcctttgggcagcttggccatgactccttg
aacgacgaagtaaaccccagacgggttctggagctgatgggcagcgaggtatcccaaatt
gcttgtggtaggcagcacacacttgcctttgtgccttcttcaggaatcatctatgcattt
ggctgcggaatcagaggccagttaggaaccggacatacgtgcaatcttaaatgtccttcc
ccagtaaagggtcagtgggtcacctacaacgagcaatacttgggtataacagatccatat
aaatattatattgttcaacgtatcttttctggaggagaccaaacgtttgttctttgctct
gaaagggagaattcggtgcctgctgatgacttccgagccataaatcaaagtgactacacc
tgttcaattaacgacgaaacgattgacatgtggaggcacaagctgtcagagaggaacaac
cccaattcagtgaatgaggttgggcaaatcctgtcctcagctgcctgctggaacggaagc
ttcctagaaaagaaaatagatgaacattttaaaactagtcccaaaatcccagggattgac
ctgaattccaccaaagtgacgtttgacaagctaatgacgtctcagcattccatcttactc
gaccaggtcttgaagagcttcgaaagctttttgatccctcagctgcccagttccccacca
gatgtggaagccatgaggatctacctgattctccctgaattcccaccattccaagactcc
aaatactacgtaacattaacccttcccttggcaatggccatactgcgcctggacagaaac
cccagcaaagtcttagataattggtggtctcaggtgtgccctacgtacttcttgaggctg
gtcgatctctataaaggcgctgtggtttatcttttgcatgggaaaaaaacattgctgatc
ccagtcttgtacagtagctacatcacagctgctctacgacttctcgagaaactccataaa
gtaaatcagaaagttaagcatgtcgaatatgacaagttttatatcccagagatttccaat
ctggtggatattcaggaagattacctgatgtggttcctgcatcaagccggaatgaaagtg
cggccgtcgatcatgcaggatgctgtgaccctctgctcttatcctttcatttttgatgct
caagccaagacaaagatgctgcagacggatgctgagctgcagatgcaggtggccattagc
ggagcgaatttgcagaacgttttcatgctacttaccctggagcccctcctggcccgaagt
cctttcctcgtccttcatgtccgtaggagcaagttggttggtgatgccttgagggagttg
agcatccattcagatattgacttgaaaaagcctttgaaggtgatcttcgacggtgaggaa
gctgttgatgctggtggagtcacaaaggaattcttccttctgctgctaaaagagctcctc
aatcccatctatggaatgttcaccttttactcagaatcaaacctgctgtggttctcagat
acctgctttgtggagcacaactggttccatctcattggcatcatctgtggcctggccata
tacaacttcaccgtggtggatcttcacttcccgctggctctctataagaaactcctgaac
gtggagccctgtttggaagatttgaaagagctgtctccaacagaaggaaggagccttcaa
cagcttttagattaccctggggaagatgttgaagaaactttctgcctgtgttttacaatc
tgcagagagagctacggagtggcagagcacaagaacctcgtgcccggtggcgacaagatt
cccgtgcagaaagagaacaggcaggagtttgtcgacgcctacgtgaattacatcttcaac
ctcgcaatccaggagtggtacgcggctttctcctccggcttcctgaaagtgtgtggtggg
aaagtcctggaacttttccagccgactgagctccgcgccatgattgtaggtaacagcaac
tacaactggaaggaactggaagagagtgctgcttacaagggagaattctctgccacgcac
ccaaccgtgaaaatgttctgggagacgtttcatgattttcctttggaaaagaagaagaag
tttctcttgtttctgacaggcagtgaccgcattccaatctacggcatgtccagtttgcgc
atcgtcatccagtccacgaccagtggggaggaatatttacccgtggctcacacgtgctac
aacctgcttgacctgcccgtgtacagcacgaaagaaatcttgaatattcgactgactcaa
gctattgaccattacgagggcttcagcttggcttga
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