Sphaerodactylus townsendi (Townsend's least gecko): 125440370
Help
Entry
125440370 CDS
T08213
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125440370 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125440370 (FIP1L1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125440370 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
125440370
NCBI-ProteinID:
XP_048366119
LinkDB
All DBs
Position
LG10:23651634..23694758
Genome browser
AA seq
591 aa
AA seq
DB search
MSAGGEVEQLAADLSGADAGDEEEEWLYGDENEEERPDEMPASVPPATGNEEEAAENGVV
KTKVTEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYGYGASPVNLNIKTGGRSYGSSGGK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLEVLPVTSTTNKITAEDIAMEVTPGAEIPDGRYNLFKVQQGRTGNMEKEILLQPTKA
EFTSPPPLFKTGIPSNSASSQSQTSTARKVSSGIGKWQERYGRAESPELRRLSGTIDVIG
QTITISRVEGRRRANENSNIQVLSERSSSDVDSNFSKPPPFFPPGAPPTHLPPPPFLPPP
PSVSTAPPLIPPPGYKGTGIPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSTRAF
PYGGVTFPHLAGSAPSWTSLMDTTKQWDYYSRRDKERERERDRDRERDRDRDRERERTRE
REREREHSPTPSVFNSDEERYRYREYAERGYERHRTSREKEERHRERRHREKEETRHKSS
RSNSRRRHDSEEGEGHRRHKHKKSKKSKEGKETGGGEAAQEQENSEAAPAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcggcgaggtggagcaactggcggcggatctgagcggggccgacgccggg
gatgaggaggaggagtggctctatggcgatgaaaatgaagaggagagaccagatgaaatg
cctgccagtgttccacccgcaactgggaacgaagaagaggctgctgaaaatggtgttgtg
aaaacgaaagtgacagaggctgaggatgatagtgatagtgacagtgatgatgatgaagat
gatgttcaggtcactataggagatattaaaacaggagcccctcagtatgggtatggggca
tcaccagtgaatctgaacatcaaaactggagggcgttcatatggatcctctggtggaaaa
gtgaaaggggttgaccttgatgcaccaggaagcattaatggtgtcccactattagaagtt
gacttagattcttttgaagacaaaccttggagaaaaccaggggctgatctttcagattac
ttcaattatggttttaatgaagatacatggaaagcgtactgtgagaaacaaaagaggata
cgcatgggactcgaagttttacctgttacctcaacaaccaataaaattacggccgaagac
attgctatggaagtaacaccaggggcagagattccagatggcagatacaatctttttaag
gtgcagcagggcagaactggaaatatggagaaagaaatattactgcaacccaccaaagct
gagttcacttctcctccaccgttattcaaaacaggaatcccttctaacagcgcctcatct
caatctcagacaagcactgccagaaaagtcagttcaggcatcgggaagtggcaggaacga
tatgggcgggctgaatcgcctgaactaagaagactgtctggtacaatagatgtgattgga
cagaccatcactatcagccgagtagaaggaaggaggcgtgccaatgaaaacagcaacata
caggttctctctgaacgctccagctctgacgtggatagcaatttttccaagccccctccc
ttttttcctccaggagctcctcccactcatcttccaccacctcctttccttccaccacct
ccatctgtcagtaccgccccccctttgattcccccaccaggatataaaggcacaggtatt
ccaataactgtgccacctccaggctttcctcctccacccggaggaccaccaccttccctt
ataccaacgatagaaagtggacattcctctggctacgatagtcgctcaactcgtgcattt
ccgtatggtggtgtcacctttccgcaccttgcaggttctgctccatcatggactagtctc
atggacacaaccaagcagtgggattattactccagaagagataaagagagagaacgggag
agagatcgagatagagaaagggatcgtgaccgtgacagggagcgagagcgtaccagggaa
agggagcgagagcgggaacacagccccactcctagtgtgttcaacagtgacgaggagcgc
tataggtacagagaatatgcagagagaggctacgagcggcatagaacaagcagggaaaag
gaggaacgacaccgagaaaggagacatcgagaaaaggaagagacaagacacaagtcatct
cgaagtaacagcaggcgccggcatgacagtgaagagggagaaggtcacaggaggcacaaa
cacaaaaaatccaaaaagagcaaagaaggaaaagaaacaggtggcggagaagctgcccaa
gaacaggaaaactctgaagcggcccctgcagaatag
DBGET
integrated database retrieval system
