Sphaerodactylus townsendi (Townsend's least gecko): 125440538
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Entry
125440538 CDS
T08213
Symbol
COL28A1
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stow01002
]
125440538 (COL28A1)
Peptidases and inhibitors [BR:
stow01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125440538 (COL28A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
125440538
NCBI-ProteinID:
XP_048366368
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Position
LG11:48954529..49029765
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AA seq
1156 aa
AA seq
DB search
MWKKRSVFFLFVLAVATNCIVYGQTRRRGQRPSSLLQRQDNLQDSNCFIDILFILDTSES
ARGEPFQYQKDFVNLLSDKVFRLKPSRVQRHDIRLAIMQFSSSVIIDHHFRSWRGLQNFK
QTFARMSFIGHGTYTYYAISNATHLFQTEGREKSIKVVLLITDGIDHPNSPDVQRISKDA
RALGVSFITIGLSNVVDRTKLRLISGDSPETPVPILDEPNLTDKIQDQLETLFNEKCCEP
DRCEQKRCECQKGEQGPPGPPGYTERGQKGERGSKGEKGEAVKGDPGEKGSEGSHGLIGE
KGNKGECGIPGVKGDRGQEGPFGAKGPRGPQGIAGPPGEPGPKGIQGKKGEPGPTGPYGP
PGVPGTGYPGPKGERGQEGRTGPQGPTGIGEPGSMGPRGPQGVPGERGQPGEGVPGQKGE
KGSEGPAGPVGAPGHFIKGDKGERGMDGPQGPMGPTGTGIQGVQGIQGPKGVPGAKGSRG
IGLPGPKGQDGAPGLKGDVGLPGIGLPGPKGDPGIPGFSGENGKPGLTGEVGKKGERGVP
GPRGPEGVPGRGEMGLKGEMGQKGEQGFAGVRGIPGPAGPKGEAGIKGTIGNPGPSIRGP
AGPKGEQGFPGPPGNDGSPGNSIMGPMGIPGLTGPPGLPGPKGDGFPGPPGLPGAPGPQG
PRGLKGAGDPGQKGDPGTRGPPGPPGQPGIGIPGPKGIIGQKGLPGPQGPPGYGTQGSKG
EQGVQGLPGQKGTMGTGFPGPKGDYGEKGDQGRRGDKGELGESGPTGPRGFSGAKGEPGL
TREDIIKLIMEICGCGFDCRDIPLELVFVIDSSESVGPTNFDLIKRFVKAAISKVRVDPA
TARVGIINFSHKAYVVSTLPQCTTEDCLNIAVDKMLYLGEGTYTATALNKTIDMFRQARP
DVKKVAILITDGQTDVRDEKLEDVVKQAHGRDIEMFVIGVVQKNNSNYRNIQKEMELIAT
DPDSEHISEIHNFLSLRSLEEKIFKQICKNSSANHIKKVLSSSSALSPGSERTGQFARAQ
TPEPYIPPSNPETDYLYPPWTHREPSITTPSPRHTPATRRQDYWQPRPTPGIPLSPNLTR
AVQPTSAIVQPQIAIGGAKAARCLEPMRPGDCRNYQVKWYYDKDANSCARFWYGGCQGNH
NRFETEQECRTTCVQN
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaaacgttctgtctttttcctctttgttttggctgttgctacaaattgtata
gtgtatggacaaaccagaagaaggggacaaaggccaagttctcttctacaaagacaagac
aatcttcaggattccaactgcttcattgacatcctctttatcctggacacttctgaaagt
gcccgaggggaaccttttcagtaccagaaagattttgtcaacctcttgagtgacaaagtt
ttccgtctgaagcccagtcgagtccaaaggcatgatattcggctggcaatcatgcagttc
agcagctcagtcattattgaccatcactttaggtcctggagaggcctgcagaactttaag
caaacctttgctagaatgtcctttattggacatggcacttacacctattatgctatttcc
aatgctactcacctgttccaaacagaaggccgggaaaaaagcataaaagtggttttgttg
attactgatggtattgaccatccaaacagtcctgatgttcagcgtatctctaaggatgcc
agagctcttggagtatctttcatcaccattggcctgtctaatgttgtcgatcgaaccaaa
ttgcggttgatatctggagattctcctgagactcctgttccaatcttggatgaacccaac
cttacagataaaatccaggaccagctggaaactttgtttaacgagaagtgctgtgagcct
gatcgctgcgaacaaaagcgctgtgaatgccaaaagggagagcaaggacctccaggacct
cccggatatactgaacgagggcagaagggtgaacgaggatctaaaggagaaaagggcgag
gctgtaaaaggagaccctggagaaaaaggttctgagggaagtcatggattaataggagaa
aaggggaacaaaggggagtgtgggataccaggcgtaaaaggagacagagggcaagaaggt
ccatttggcgcaaagggaccgagaggccctcagggaattgctggtcctccaggtgagcct
ggtccaaaaggtattcaaggaaagaagggggagccagggccaacaggcccttatggacct
cctggagttcctggtactggctatccaggacctaagggtgagagaggtcaggaaggaaga
actgggcctcaaggacctactggaattggggagccaggctcaatgggcccccgtggtccc
cagggcgtgcctggtgaaaggggtcaaccaggagaaggagttccaggacaaaagggtgaa
aagggttctgaagggccagcaggaccagttggagcaccaggccatttcatcaaaggagac
aagggtgagcgagggatggatggaccacagggcccgatgggaccaactggaactggtatc
cagggagttcagggaattcaaggtccgaaaggggtgcctggggcaaaaggctcacgaggc
ataggcctgcctggaccaaagggacaagatggtgcacctggactaaaaggcgacgtagga
ctaccaggaattggactacctggacctaaaggagatccgggaataccaggattttcagga
gaaaatgggaaaccaggattaactggagaagtggggaaaaagggcgagcgaggagttcct
ggcccaagaggccctgaaggggtgcctgggagaggagaaatgggtctaaagggcgaaatg
ggacagaaaggagagcaaggatttgcaggtgtgagaggaataccaggacctgcagggcca
aagggcgaagctggaatcaaaggtacaattggtaaccctggaccttcgattcgtgggcca
gctggccccaagggggaacaaggatttcctgggcctcctggaaacgacggcagtcctgga
aattccattatgggaccgatgggcattccagggctgactgggccacctggactaccgggg
ccaaaaggagatggctttccaggtccaccaggacttcctggagcacccggtcctcaagga
ccaagaggcctcaaaggagcaggtgacccagggcaaaagggagatcctggaacgagggga
cctccaggacctcctgggcaaccaggaattggaattcctggaccaaagggcatcattggg
caaaaaggtttgcctggaccacagggccctccaggatatggtacacaaggaagtaaggga
gaacaaggagttcaaggcttaccaggacaaaaaggcaccatggggactgggtttcctggc
cctaagggagactatggagagaaaggggatcaaggaagaagaggtgacaaaggagagctt
ggggaatctggacctacaggaccaaggggattttcaggagccaaaggtgaacctggtctt
actagagaagatataatcaaactcatcatggaaatatgtggctgtggttttgactgcagg
gacattcctttggagcttgtattcgtgattgacagttctgaaagtgtggggcccaccaat
tttgacctcatcaaacgtttcgtaaaagcagccattagcaaagtccgagtcgacccagcg
acagcccgtgttggcatcatcaacttcagccacaaagcatacgtggtatccactttgcca
caatgcaccactgaagactgcctgaatattgctgtggataaaatgctttatttaggggag
ggcacctacactgctaccgctctcaacaagaccattgacatgttccggcaggcccgacca
gatgtgaaaaaggttgccatcctcataacagatgggcaaactgatgttcgtgatgaaaag
ttggaggatgtagtgaagcaggcgcatggccgcgacatagaaatgtttgtaattggtgtg
gttcaaaagaataattccaattataggaatattcaaaaagagatggaactcattgccaca
gacccagacagtgagcatatctccgagatacacaatttcctcagcttacgatctcttgag
gaaaagatctttaaacaaatttgtaaaaacagttccgccaaccatatcaagaaagtgctc
agttcgtcctcggcactttctcctggaagtgagcgtaccggtcagtttgccagagcacag
acgccagagccatacatccctccatctaatccagaaacagattatctgtatcctccctgg
acacaccgagaacccagtatcaccacaccttctcctaggcatactcctgctactcgaaga
caagattattggcaacctagacctactccagggattcctctctcgcctaatttaactcgt
gctgtgcagccaacatcagccattgttcagcctcagatagcaataggtggcgcaaaagct
gccaggtgcttggaaccaatgagacctggggactgtcgaaattaccaagtgaagtggtat
tatgataaggatgctaattcttgtgcccgattttggtacggcggctgtcaggggaaccac
aaccgctttgaaacagaacaagagtgccggacaacttgtgttcaaaactaa
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