Sphaerodactylus townsendi (Townsend's least gecko): 125440753
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Entry
125440753 CDS
T08213
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125440753 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125440753 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stow04812
]
125440753 (VIM)
04147 Exosome [BR:
stow04147
]
125440753 (VIM)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125440753 (VIM)
Cytoskeleton proteins [BR:
stow04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
125440753 (VIM)
Exosome [BR:
stow04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125440753 (VIM)
Exosomal proteins of other cancer cells
125440753 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF4515
BLOC1_2
DUF7491
LAMB4
DUF4407
GAS
Motif
Other DBs
NCBI-GeneID:
125440753
NCBI-ProteinID:
XP_048366664
LinkDB
All DBs
Position
LG11:54414989..54426824
Genome browser
AA seq
467 aa
AA seq
DB search
MSTTTTTSRSSSYRRMFGGGSRPSTGGGSRYVTSSSRYSLGSAIRPSSVRLVSSSAPGGV
YQTRSSSVRLRSSFPQQVRLLSDAGVDFSLADAINTEFKANRTNEKAELQELNDRFANYI
DKVRFLEQQNKILSAELDQLRGKGTSRLGDLYDEEMRELRRQVDQLTNDKARVEVERDNL
ADDIMRLREKLQDEIIQREEAESNLHSFRQDVDNASLARLDLERKVESLQEEVVFLKKLH
DEEIRELQAQIQEQHIQVDMDVAKPDLTAALRDVRQQYECVAAKNLQEAEEWYKSKFADL
SEAASRNNDALRQAKQEASEYRRQIQSLTCEVDALKGTNESLERQMREMEENFSLEAANY
QDNIARLQEEIHNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISMPLPTF
ASLNLRETNLESVPIMDTHSKRTLLIKTVETRDGQVINETSHHDDLE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaccaccacgaccagccggagctcctcttaccgccgcatgttcgggggcggc
agccggcccagcacggggggcggcagccgctatgtcacctcgtccagccgctactcgctg
ggcagcgccatccggcccagcagcgtccgcctggtgtcctcctccgcgccgggcggcgtc
taccagacccgctcgtcgtcggtgcgtttgcgcagcagcttcccgcagcaggtgcgcctc
ctgtccgacgccggcgtggacttctccttggccgacgccatcaacacggagttcaaggcc
aaccgcaccaacgagaaggccgagctgcaggagctcaacgaccgcttcgccaactacatc
gacaaggtgcgcttcctcgagcagcagaacaagatcctgagcgccgagctcgaccagctg
cggggcaagggcacctcccgcctgggcgacctctacgacgaggagatgcgcgagctccgg
cgccaggtggaccagctcaccaacgacaaggcgcgcgtggaggtcgagagggacaacctg
gccgacgacatcatgcgcctgcgggagaaacttcaagatgagatcattcagagagaagaa
gctgaaagcaacttgcattctttcagacaggatgttgataatgcctctctggcacgcctg
gatcttgaacgcaaagttgaatcattacaagaagaggttgtcttcttgaagaagcttcac
gatgaggaaatccgtgagctacaggcccagatccaggaacaacatatccaggttgatatg
gatgttgctaagcctgatctgactgctgccctacgtgatgtgcgtcaacagtatgaatgt
gttgctgctaagaatcttcaagaagctgaagagtggtacaaatccaaatttgcagatctg
tctgaagcagctagcaggaacaacgatgccttgcgccaggccaaacaagaagcaagtgaa
taccgcaggcaaattcagtctctcacctgtgaagtggatgcacttaaaggaactaatgaa
tctctggaacgccagatgcgtgagatggaagagaacttctctcttgaagctgctaactac
caagacaatattgcccgtctccaggaagaaatccacaacatgaaggaagaaatggctcgc
cacctccgcgagtaccaagaactgctgaatgtaaagatggctcttgatattgagattgcc
acctacaggaaacttctggagggagaggagagcagaattagtatgcctcttcctactttt
gcttccctgaacctgagagaaacaaaccttgagtctgtcccaatcatggatacccattca
aagagaacactcctgatcaagactgttgaaactagagatggacaggttatcaatgaaact
tcccatcatgatgacctggagtaa
DBGET
integrated database retrieval system
