Sphaerodactylus townsendi (Townsend's least gecko): 125440773
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Entry
125440773 CDS
T08213
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125440773 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stow02000
]
125440773 (ABCB1)
Enzymes [BR:
stow01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125440773 (ABCB1)
Transporters [BR:
stow02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125440773 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_5
AAA_16
RsgA_GTPase
Rad17
Zeta_toxin
AAA
AAA_14
G-alpha
AAA_30
AAA_29
AAA_15
DUF815
AAA_7
DUF87
nSTAND1
NEMP
NTPase_1
sCache_3_2
Motif
Other DBs
NCBI-GeneID:
125440773
NCBI-ProteinID:
XP_048366710
LinkDB
All DBs
Position
LG11:53350620..53410087
Genome browser
AA seq
1285 aa
AA seq
DB search
MNGEVGTMAATDHVSETESKSSEKKKNKEKPNMVSPLTMFRYSDGLDKFFMVLGTLFAAA
HGACLPLMMIVFGDMTDDFVASGTPPENMDNITLDNITLSNISINDFFKSLEDRMTSHAY
YYSGIGFAVLVVAYVQIAFWTLAAGRQIKKIRKHFFHAILRQEIGWFDMNDVGELNTRLI
DDVSKISEGIGDKISILIQGISTFLTGIIVGFIRGWKLTLVILAVSPVLGLSAAIWAKVL
SAFTSKELAAYAKAGSVADEVLSAIRTVMAFGGQKKEIERYRKNLEDAKNIGIRKAVTAN
ISIGFAFLLIYASYSLAFWYGSTLVLYEGYSIGKILTVFFAVLIGAFSIGQATPNIEAFA
NARGAAYAVFNIIDNEPQIDSFSETGYKPDTIKGNLQFQNVCFNYPSRPDVKVLQSLNLN
VNSGQTVALVGSSGCGKSTTVQLIQRFYDPQEGLITIDGQDIKTLNLRYLREIIGVVNQE
PVLFATTIAENIRYGRENVTMEEIEKAVKEANAYDFIMKLPDKFETVVGERGAQLSGGQK
QRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNAD
LIAAFEDGVITEQGTHNELMKKEGVYFKLVSMQSIETEVQSEELDESKPNLSRSLSAESS
KSALSNGVRRRSTRRSVKKSQAEDEDPEVQIVDPEEKLPPVSFLKIMKLNKSEWPYFLVG
TLSAIVNGALQPGFSIIFSEIIGVFAITDKGVVREKTNFYSLLFLMLGIISFVTFFLQGF
TFGRAGEVLTMKIRYMGFKAILRQDISWFDDPKNSTGALTTRLANDASQVKDATGARLGL
IAQNFANLGTGIVISLIYSWQLTLLLLAIVPIIAISGLIEMRTLSGQAKKDKKELEGAGK
IATEAIGNIRTVVSLTQERRFEHMYGESLLGPYKNSVRKAHIHGLTFSLSQAMMYFTYAG
CFRFGAYLVRYVGTDFKSVFLVYSCIVFGAMALGQTSSFTPDYAKAKVSAAHMFQLFERV
PSIDNYSEGGLKLERFRSDIALKEVAFNYPTRPDVLVLQGLNVKVEKGQTLALVGSSGCG
KSTVVQLLQRFYDPLSGEVLLDKQNTKQLNIQWLRSQIGIVFQEPTLFDCSIAENIAYGD
NSRVVPHDEIVEVAKAANIHSFIESLPDKYSTSAGDKGTQLSGGQKQRIAIARALIRQPK
ILLLDEATSALDTESEKVVQDALDKARQGRTCIIIAHRLSTVQNADSIAVIENGKVIEQG
THQKLLAKKGVYYSLVTVQAGTANA
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaggttggcacgatggctgcaacagatcatgtttctgagactgaaagtaaa
agcagtgaaaaaaagaaaaacaaagaaaaacccaatatggtcagcccacttacaatgttt
cgttactcagatgggctggataaatttttcatggtgctgggcactttatttgccgctgca
catggagcttgccttccactcatgatgattgtttttggagatatgacagatgattttgtt
gcttcaggaacgcctccagaaaacatggacaatatcactctagacaatatcaccctgagc
aatattagtataaatgatttttttaagtcactagaagaccgaatgaccagccatgcatac
tactattcgggaatagggtttgctgttcttgttgtagcctatgtgcaaattgcattttgg
accctggcagcgggccgtcagatcaagaaaattagaaaacattttttccatgccattttg
cgtcaggaaattggatggttcgatatgaatgatgttggggaactaaatacgcgacttata
gatgatgtctctaaaatcagcgaaggaatcggagacaagatttcaatcctaatccaagga
atttctacatttctaacaggaattatagtcgggttcattcgcgggtggaaactaactctt
gtaatactggcagtcagtcctgttctaggactctcggctgcaatatgggcaaaggtcctt
tctgcattcaccagcaaagagcttgctgcctatgcaaaagctgggtccgtagcagatgag
gttctatcagctatcaggacagtaatggcttttggaggacagaagaaagaaattgagagg
tatcgtaaaaatttagaagatgctaaaaatattggaatcaggaaggctgttacagctaac
atctccattggatttgctttcttattaatatatgcatcttattcccttgctttctggtat
ggatcaactttagtattatatgaaggttactctattgggaaaatccttacagtctttttt
gctgtgttaattggagcatttagtattggccaggctactccaaacatagaggcatttgct
aatgcaagaggagcagcttatgcagtttttaacattattgataatgaacctcaaattgac
agtttttcagaaactggttacaaaccggacacgattaaaggaaacctgcagttccaaaat
gtttgcttcaattatccgtcaaggccagatgtcaaggtgttacaaagcttaaatctgaat
gttaatagtggccagacagtagctctggtgggcagcagcggttgtgggaaaagcacaact
gtccaactgatacagagattttatgatcctcaggaaggcttgattaccattgatggacag
gatattaagactctgaatttaaggtatctcagggagattataggcgttgtgaaccaggaa
cctgttttgtttgctaccacaatagcagaaaacatacgatacggtcgggaaaatgtcacc
atggaagagattgaaaaagctgtcaaagaagccaatgcctatgacttcatcatgaaattg
cctgataaatttgaaactgtggttggagaaagaggggcccagctaagtggaggtcagaag
cagaggatcgcaattgcccgagcccttgttcgtaatcccaagatcctattgctggatgaa
gcaacgtcggctttggatactgagagtgaagcagtggtgcaggcagccctagacaaggcc
agggagggtcgcacaactattgtcattgcccatcgtttatctacggttcgcaacgcagat
ctcattgctgcttttgaagatggtgtcatcacagaacaagggacccataatgaactaatg
aagaaggaaggagtttatttcaaacttgttagcatgcagtcaattgaaaccgaagttcag
tcggaagagctggatgagagcaagcccaatctctcaaggagcttatcagcagaatcatcc
aaaagtgctctatcgaatggagtgagaagacgttcgactcgtagaagtgtcaaaaagtca
caagcagaggatgaggatcctgaggtgcaaattgttgaccctgaagaaaaactgcctcca
gtttcatttttgaagattatgaagctgaataaatctgaatggccttactttttggtggga
acactttctgctatcgttaatggagctttgcagccaggattttcaataatattttctgaa
atcataggggtttttgcgattactgataaaggcgttgtccgagaaaagaccaatttttac
tcactgctcttcttaatgcttgggatcatttccttcgtcaccttttttcttcagggtttt
acatttggaagagctggagaggtcctaacgatgaagattcgctatatgggattcaaagca
atcctcagacaggacatcagttggtttgatgaccccaaaaacagcactggggcactgact
acgaggcttgctaacgacgcttcccaagtaaaagatgctacaggggccaggctgggtttg
attgctcaaaactttgccaaccttggaacagggattgtaatctcactgatatatagctgg
cagctgacacttctgctcttggctattgtgccaattattgctatatcagggcttattgaa
atgagaacgttgtctggtcaagcaaagaaagataagaaggaacttgaaggtgcgggaaag
atagcaactgaagcaatagggaacatacgaactgttgtttccctcactcaggagagaaga
tttgaacatatgtatggagagagtttacttgggccgtacaaaaattctgtgaggaaagca
catattcatggactgacgttttctctttcccaagcaatgatgtactttacctatgcaggg
tgttttcgatttggtgcctatcttgtgagatatgtgggcacagattttaaatcagttttc
ttagtatactcctgcattgtctttggtgccatggcgcttggacagacctcttcatttaca
ccagattatgccaaagccaaagtgtcagcagctcacatgtttcagttgtttgaaagagta
ccttcaatagataattacagcgagggaggattgaagcttgaaaggtttcgcagcgatatc
gccctcaaggaggtggccttcaattatccaacccggccagatgtccttgtgctccaagga
ctgaatgttaaagtggaaaagggacagacactggcccttgtgggtagcagtggctgtgga
aagagcaccgtggtccagctgctgcaaagattctatgaccctctcagtggagaagtgctg
ttggacaagcaaaatacgaaacagttaaacattcagtggctgagatctcagattggaata
gtctttcaagaaccaaccctttttgactgcagtatagcggagaacattgcctacggtgat
aacagccgagtggtgccgcatgacgagattgtagaagtagctaaagcagccaacatacat
tccttcattgaatccctaccagataaatatagcacttctgcgggtgacaaagggactcag
ctctctgggggccagaaacaacgcattgctatagctcgagcactaatccgccagccgaaa
attcttctactagatgaagcaacttctgcacttgatactgaaagtgaaaaggtagtccaa
gatgccctggataaagccagacaaggccgtacctgcattataattgctcatcggttatct
acagttcagaatgctgacagtatagcagtgatcgaaaatgggaaagtcatagaacaagga
acccatcagaagctgctggctaagaaaggagtctattactcactagtcactgttcaagca
gggacagccaacgcataa
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integrated database retrieval system
