Sphaerodactylus townsendi (Townsend's least gecko): 125440790
Help
Entry
125440790 CDS
T08213
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stow03037
]
125440790 (NPHP3)
Cilium and associated proteins [BR:
stow03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
125440790 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
NPHP3_hel
TPR_12
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_17
TPR_19
KAP_NTPase
NACHT
AAA_22
TPR_6
AAA_16
DUF2225
ARM_TT21_4th
TPR_11
AAA_14
AAA_19
T2SSE
Viral_helicase1
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
125440790
NCBI-ProteinID:
XP_048366749
LinkDB
All DBs
Position
LG11:28581054..28620363
Genome browser
AA seq
1317 aa
AA seq
DB search
MGTASSLVSPVGTVGEVIEDTYEGGGGEACEIPVEVKPKARLLRSSFRRVGTSRPGGLIG
ASFKSTVSVQELECMAEYERLKKEYEIFRISKNNEVASMMKKEAKLDKENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAAAFEHDRDKVKRQFKIFRETKENEIQDLLRAKREL
EAKLQRLQAQGIHVFDPEETDSDDSCTEAAAAGAQAEYWAGGALGSEPSMGSMMQLQQSF
RGPEFAHSSIDVEGPFANINRDDWDAAVASLLQVTPLFSHSLWSNTVRVYLINTQETQSE
VDIFMQKYSPKLQNYCETMEYFFQAIHFPVETGSPSQSVRKWEIEKSSLTILFLNLTLPS
CLLEECEEAFLKNPEGKPRLLYHRLEEGQTSSDSAQQLLEQVRHVNKAKIISHMGGPEEG
ACAVYSYVEKTIKQDILGCETAEQEREDAPDDGDSSVPEEEIFGDVLWDAHDEQEQMEAF
QQASNSTCELGFEKYYERLNDLVVAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSSNT
LILYHFVGKPTSSSAEPALILKRLTLKLMQHSWSVSPVTLDPAKLLEEFPRWLEKLSAHH
QGSIIIIIDSIDRIQQAEKHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLNM
NDVKSLINEECSFANLKLTEDQEKKLEKHCHSSTTCNALYVTLLARMVAGAGSIESIDII
LQKCLLCQDTVSLYKLVLKSIQESLKSEKDKDYLKEILCLISISHNGVSESELMELCPEL
SWAVLASAVHSLHKMCFLTYGCGLLKFRHLQAWEMVKLEYTEAGHSAFAFCREKLIDYFT
RQLSQERVTWRSADELPWLFQQQGDKQKLHECLLNLFVSQNLYKRGHFAELLSYWQLLGK
DKNSMAAEYFSSLKLFEKSCEKEEGMISLADIYETLGRFLKDLGLLSQAIAPLQRSLEIR
ETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEIFENAYGTEHLRVARELDAL
ATLYQKQNKYEQAEHLRKKSFKIQQKAVRRKGSLYGFALLRQRALQLEELTLGKDSSDGA
RTLNELGVLYYLQNNLETAELFLKRSLEMRERVLGPDHPDCAQSLNNLAALYNEKKHYDK
AEELYEKALNIRKRALAPDHPSMAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQKSFGA
KHPSVATALVNLAVLYCQMKKHFEALPLYERALKIYEDSFGRMHPRVGETLKNLAVLSYE
GGDFEKAAELYKRAMEIKEAESLLTGGKAASRHSSSGDAVSLKSVFSPNVFLQQGQR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgcttcatccttggtaagcccagtagggactgttggggaggtgattgaagac
acatatgagggaggtgggggtgaagcctgcgagattcccgtggaggtgaaacccaaagcc
cgccttctgcgcagctccttccgtcgcgtggggacatcacggcctggaggtcttattggt
gccagcttcaaatcaactgtctctgtacaagagctggagtgtatggcagagtatgaacgc
ctgaagaaagaatacgagatcttccgtatcagcaagaacaatgaagtggcatcgatgatg
aagaaagaggccaaactggataaggaaaacaagcgcctgcgggcagagctgcaggcactt
cagaaaacatatcagaaaatactcagagagaaagaaagtgctttggaggctaaataccaa
gccatggagagagctgctgcatttgaacatgaccgagataaagtcaagagacagttcaag
atttttagagaaaccaaggagaatgaaatccaggatttactgagggcaaaacgagagttg
gaggcaaaattacagcggctgcaagctcaaggcatccacgtttttgaccctgaggagaca
gactcagatgatagctgtacagaagctgctgctgctggagctcaggctgagtactgggct
ggtggagccctgggaagtgagccatccatgggcagtatgatgcagcttcaacagtctttc
agaggccctgagtttgcacacagttctattgatgtggaagggccatttgcaaatattaac
agagatgattgggatgcagctgttgccagtttgttgcaggtcactccactgttttcccac
tctttgtggagtaacacagtaagggtgtatctcattaatacacaggagacgcagtcagaa
gtagacatcttcatgcagaaatactccccaaaacttcagaattattgtgagaccatggag
tacttcttccaagctatccatttcccagtagaaactggaagtccttcccagtctgtgagg
aaatgggaaatcgagaaaagttctttaactattttgttcttgaatttaactttgccaagt
tgtctgctggaggagtgtgaagaggcgtttttgaaaaacccggagggaaagccccgtctt
ctttaccaccgtctggaggagggccaaaccagctcagattctgcgcagcagttacttgaa
caagttcgtcatgtgaacaaagcaaagatcatcagtcacatgggagggccagaagaggga
gcatgtgcagtctacagttatgtggagaagaccataaagcaggatatcctaggctgtgaa
acggcagaacaggaaagggaagatgcacctgacgatggtgactcctctgttcccgaagag
gaaatctttggtgatgtcctgtgggatgcacacgatgagcaagaacagatggaggctttc
cagcaggcttccaattcaacgtgtgagcttggatttgagaagtattatgaacgcctaaac
gacttagtggtggcaccagcacctattccaccccttcttgtatctggaggacctggctct
ggaaaatctcttctactatcaaaatggattcaactgcaacagaagcactcatcaaataca
ctaattctgtatcattttgttgggaaacctacatcaagcagcgcagagcctgccctgatt
ctcaaacggctcacattgaagcttatgcagcattcctggtcagtttcacccgtgacactg
gatcctgcaaaactattagaagaatttcctcgttggctggagaaactctctgctcaccat
cagggcagcattataataattattgactctattgaccgaatccagcaagcggaaaaacat
atgaagtggctgatcgaccctttgcccgtgaatgtcagagttgtagtatcggtgaatgtt
gaaacatgtccgcaagcatggaggctgtggccaactcttcaccttgatccactcaatatg
aatgatgtgaaatctctcattaatgaagaatgcagctttgcaaatctgaagctgactgaa
gaccaggagaagaagcttgagaaacactgtcattctagtactacttgcaatgctctctat
gtcactctgttggctagaatggtggctggtgctggaagcatagaaagtattgacataatc
ttacagaagtgtttgctgtgccaagacacagtgtcgctgtacaagctagttctgaaatcc
attcaagaatctttgaaaagtgagaaagacaaagactacttgaaagagattctttgcctc
atcagcatcagccacaatggagtgagtgaatcagaactaatggaactctgtcctgagctc
tcctgggcagttctggcctcggcagttcacagtctgcacaagatgtgctttttaacgtat
ggttgtggcttgttgaagtttcgtcacctacaggcttgggaaatggtaaagctggagtat
acggaagcaggtcacagtgcttttgctttctgccgagaaaaactgattgactacttcacc
aggcagctcagtcaagaaagagtgacttggagaagtgcagatgaactcccctggctgttc
cagcaacaaggtgacaagcagaaattacacgagtgcctcttgaatctgtttgtatcccag
aacctttataaaaggggccattttgcagaactgctgagctattggcagcttcttggaaaa
gataagaattccatggcagccgagtattttagctccctgaagctatttgagaaaagctgt
gagaaagaagaaggtatgatctctctggctgacatttacgagactctgggacggtttctt
aaagacctgggtcttcttagtcaggccattgctcctttgcagcgctccctggagattcga
gagaccgccctcgatccagaccaccctagagtagcccagtctctccaccaactagcaggc
gtttacgtgcagtggaagaagtttggtaatgccgagcagttatacaagcaggctctcgaa
atctttgaaaatgcttatggaactgaacatctcagggttgctcgcgaactcgacgctctt
gcaacgttgtaccagaagcagaacaagtatgaacaagctgaacatctaaggaaaaaatca
ttcaaaattcaacaaaaagctgtgaggcgaaaaggcagcctgtatggatttgctcttctt
cgccaacgagccctgcagttagaggagctcacgttggggaaagactcatctgacggtgct
cgaactctcaacgaacttggtgttctctactaccttcaaaataatcttgagacagcagaa
cttttcttgaaacggtccctggaaatgcgagaacgggttctcggtcctgatcacccagat
tgtgcccagtctttgaataatctagcagctctttacaatgagaagaagcactatgacaag
gcagaagagctgtatgaaaaggcactgaatatccggaagagagcactggcgcctgaccat
ccgtctatggcttacactgtgaaacaccttgctgtcctctacaagaagatgggaaagctt
gacaaagccgttcctctatatgaattggctgttgaaatacgacaaaaatcttttggtgca
aagcaccccagtgtggctactgctttggtaaacttggctgttctttattgccaaatgaaa
aaacactttgaagctttgcctctttatgaacgggccttgaagatttatgaagacagcttt
ggacgtatgcaccctcgtgtgggagaaacattaaaaaatttagcagtgttgagctatgaa
ggaggggattttgagaaagctgctgaactttataagagagcgatggaaatcaaagaagca
gaatcattgctgaccggagggaaagcagcttcccgtcattcatcaagtggagacgcggtc
agtttgaagagcgttttctctcccaacgttttcctgcagcaagggcaaaggtga
DBGET
integrated database retrieval system
