Sphaerodactylus townsendi (Townsend's least gecko): 125440932
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Entry
125440932 CDS
T08213
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125440932 (VPS50)
Membrane trafficking [BR:
stow04131
]
Protein recycling
Others
EARP complex
125440932 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
125440932
NCBI-ProteinID:
XP_048367024
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All DBs
Position
LG11:complement(51004059..51100469)
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AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQGDIHDLSPLENFRIPTKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDVVKYELEKLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLMGLLKSLRTIKTL
QQTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYSTMEWHEKCDCDEPASPSDG
SNTMGGEETNFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESVRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSI
LQLHEFKFMGQSRSPSVSPSKQPASEIERTVTLFEQYYNGGNPFEIPANNKDDETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSKKRSDYCLN
KGNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDAF
ESTGLGLSSSRLRTTLNRIQESLIDVEMSSDATGTLTGAEERKEKVPSPHLSHLVILTSG
SSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPPAKKPFLQQFYSQTVSTASELRKPI
YWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDSLLKEFEQFNGKLNEVSRRVRIP
LPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLNNLVSVCLGSHINKKARQKLLAAIDDTD
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgcttatgacccgacagggtctcaaaagtcctcagggagatatt
cacgatttgagcccacttgagaacttcagaattcctaccaaggaggaacttcgagagctt
cgggaacaaccaactgatcctcaggcgcagcaagaaataattaacagcattgaagaggtc
tatttttccaatgattcctttgatgttgttaagtacgagttggagaagctaccccctgtg
ctgagtcttcaagaactggaagagtacagagacaaattaaagcaacaacaagcagctgta
tccaaaaaggtagctgacttgatacttgaaaaacagcccgcctatgtgaaggaacttgaa
cgagtgacatcgttacaaactggccttcagttagctgcagtcatttgcacaaatggaaga
cgacatctgaatattgcgaaggaaggttttactcaagccagcctgggccttctcgccaac
caacgaaaacgtcagctgctgatggggctgctcaagtccctgagaacaataaaaactctg
caacaaactgatgtacgcttaagtgaaatgttggaggaggaggattatccaggggctata
cagttgtgccttgaatgccagaaagctgccagcacattcaaacactacagctgcataagt
gaattgaattcaaaactgcaagacactttggagcaaattgaggaacagctagatgttgcg
ctttccaaaatctgcaagaactttgatatcaatcattatacaaaggttcaacaagcttac
agactactggggaaaacacagacagcgatggaccaactacatatgcactttactcaggcc
attcacaacacagtattccaagtggtccttgggtatgtagagctgtgtgccggaaacaca
gacaccaaattccagaagcttcagtacaaggacctctgcacacacattacatcagacagc
tacattccttgccttgctgacctctgcaaagctctatgggaggtaatgcttagttattac
agcaccatggagtggcacgagaaatgcgattgtgatgagcctgcttcaccttctgatgga
agcaatacgatgggtggtgaggagaccaattttgaccgcagctatgtgaaaaagaaattg
gaacacggactttcaagaatatggcaggatgttcagctgaaagtgaagacgtatttgctg
gggactgatatgtcgaacttcaaatatgatgatttcatctttgtgctggatattatcagc
agactgatgcaagttggagaagaattctgtggcagcaagtcagaagttttgcaagaatca
gttaggaaacaaagtgttaattatttcaagaactatcacagaactcgtcttgaagaactg
cgaatgttcttagaaaatgagacatgggagctttgccctgttaaatcaaacttcagcata
ctgcaattgcatgaatttaagttcatgggccaatcacgttctccttctgtctcaccgagc
aagcagcctgcttcagaaatagaaagaactgtaactctgtttgagcagtactataatgga
ggaaacccatttgaaatcccagccaacaacaaggatgatgagactgaagatgtactggct
tctaatgggtatgagtcggacgaacaggaaaagagtgcctaccaggagtatgacagcgac
agtgacgttcctgaagaactgaaaagagactatgtcgatgaacagactggagatgccccc
gtgaaaagtgtttctcgagaaaccctgaggagcaagaagcgatcagattattgcctcaac
aaagggaatgcacccattttaaccaacactacacttaatgttataagactggttggcaaa
tatatgcagatgatgaacatcttaaagcctattgcctttgatgtgatccacttcatgtcc
caactttttgactattatttgtatgcaatatatacattttttggccgaaatgatgcgttt
gaatcaacggggctgggactcagcagtagcagacttcgtactactctgaacagaatacag
gagagtctcattgatgtggagatgtcctctgatgccactgggactcttactggcgctgaa
gaaagaaaagagaaagttccaagcccacatctcagtcatctcgtcattctgacctctggc
agctctctgtatggcttggcagagagggtggtggccacagaatccttagtatttttagcc
gagcagtttgaattccttcagcctcatctcgatgcagtaatgcctccagccaagaaacct
tttcttcagcagttctactctcagacagtatcgacagccagtgagttgcgcaaacctatt
tactggattgtagctgctaaagcaattgattatgaacagatgctgctccttatggccaat
gtgaaatgggatgtgaaggaaatcatgtcccagcataatatttatgtagattcactttta
aaggaatttgaacagttcaacgggaagctgaatgaagtatctagaagagtccgtattcca
ttgccagtgtcaaatattctttgggagcactgtatacgattagccaatcgaactcttgta
gaaggttatgctaatgtcaagaagtgcagcaacgagggccgtgccttgatgcagctggac
ttccagcagtttttaatgaaactggaaaagctcacggatattagaccaattccagataag
gaatttgttgagacctacatcaaagcttattatctgactgaaaacgacatggaacgctgg
atcaaggagcacagggaatattctaccaagcaattgaacaatctggtgagtgtttgtctg
ggatcgcacatcaacaagaaagcaagacagaaactattagcagctattgatgacacagac
aggcctaaaagataa
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