KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125441047
Entry
125441047         CDS       T08213                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    125441047 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stow03400]
    125441047 (WDR48)
DNA repair and recombination proteins [BR:stow03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     125441047 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th WDR54 Beta-prop_DCAF4 Beta-prop_IP5PC_F WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 125441047
NCBI-ProteinID: XP_048367282
LinkDB
Position
LG11:71768222..71798276
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDNRVLICEEKAPVLKM
ELDRSADPPPALWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSCPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEEENEMNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcgcatcaccgacagaacacggcggggcggcggaaagtgcaggtctcctatgta
attagagatgaagtggagaagtacaatcggaacggcgtaaatgcactgcagctggatcca
gcattaaacagactctttacagcaggccgtgactccattatcaggatatggagtgtcaac
cagcacaagcaagacccttatatagcatctatggaacatcacacagactgggtgaatgac
attgtactctgctgcaatggcaaaactttaatatctgcttcttccgacactactgttaaa
gtatggaatgcacacaagggattttgcatgtccacactaaggacgcataaggattatgtg
aaagccttggcatacgcaaaagataaagagctggttgcgtctgctggcctggacagacag
atattcctctgggatgtaaatacgctaacagcactgactgcctcaaataacactgtcaca
acttcgtctctcagtgggaacaaagattctatctacagccttgccatgaatcagatggga
acagtaatcgtatcagggtccactgaaaaggttttaagggtttgggatcccagaacctgt
gcgaagcttatgaaacttaaagggcacacagacaacgttaaagctttgctgttgaataga
gatggcacgcagtgtctttctggcagttctgacgggaccattaggctctggtctcttggt
cagcagaggtgcatagctacctacagagtccatgacgaaggggtttgggccctgcaggtc
aacgaagccttcactcatgtttattcgggtggaagagaccgaaagatatattgtacagat
ttacggaatcctgataaccgggtgttgatctgtgaagaaaaggcaccagttcttaagatg
gaactcgatcgatcagcagatcctcctccagcgctttgggttgccacgactaaatcgtcc
gtgaacaaatggactttgaagggaattcacaacttcagggcttccggggactatgacaac
gactgcacgaatccaattacacccctctgcacacagcctgaccaagtcattaaagggggg
gctagcattattcagtgccacattctcaatgacaagagacacatattaaccaaagatacg
aataacaatgtggcatactgggatgtgttgaaggcttgtaaagtagaagaccttgggaaa
gtggactttgaggaagagattaaaaaaaggtttaaaatggtgtacgtgccaaactggttt
tccgtagacctgaaaaccgggatgttgacgattactttagacgagagcgactgctttgca
gcttgggtctcagcaaaggatgctgggttcagctgtccggatggatctgatcctaaattg
aacctgggagggcttttgctgcaggcgctcttggaatattggcccagaacacacatcaat
ccgatggatgaagaagaaaacgaaatgaaccacgtgaacggcgagcaggagaacagagtg
cagaaagggaatggatacttccaagtgccaccccacacccctgttatctttggtgaagct
ggagggcgcactttgttcaggttattatgtcgggactccggaggtgaaacagaatccatg
ctccttaatgaaaccgtgccacaatgggtaattgacatcactgtggataaaaatatgcca
aaattcaataagattcccttctacctccaacctcactcatcctccggggcaaaaacttta
aagaaggatcgactgtcggccagtgacatgttgcaagtcaggaaggtgatggagcacgtc
tacgaaaaaataatcaacctggacaatgaatcgcagaccaccagttcttccaacaacgaa
aaagccggggaacaagagaaagaagaggacattgcggttttagccgaagagaagattgaa
ctcttgtgtcaggaccaggttttggatccaaacatggaccttcgaaccgtcaagcacttc
atatggaagagcggcggcgacttgacccttcactaccgccagaagtcaacgtga

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