Sphaerodactylus townsendi (Townsend's least gecko): 125441106
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Entry
125441106 CDS
T08213
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03018
RNA degradation
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125441106 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
125441106 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125441106 (LSM5)
03041 Spliceosome [BR:
stow03041
]
125441106 (LSM5)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125441106 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
125441106 (LSM5)
Spliceosome [BR:
stow03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125441106 (LSM5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
125441106
NCBI-ProteinID:
XP_048367393
UniProt:
A0ACB8FTN1
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All DBs
Position
LG11:22896505..22901541
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AA seq
91 aa
AA seq
DB search
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaacgcgacaacaaacccgtcccagcttctgccgcttgaacttgtggacaag
tgtataggatcccgcattcatatcgtgatgaaaagtgataaagaaattgttggcaccctc
cttggttttgatgattttgtcaatatggtactagaagatgttacagagtttgaaatcaca
cctgaaggaagaagaatcacaaagttagatcagattttgctaaatggcaacaacataaca
atgttggttcctggaggagaaggaccggaagtgtaa
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