Sphaerodactylus townsendi (Townsend's least gecko): 125441431
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Entry
125441431 CDS
T08213
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04270
Vascular smooth muscle contraction
stow04625
C-type lectin receptor signaling pathway
stow04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125441431 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125441431 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
125441431 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125441431 (ARHGEF12)
Membrane trafficking [BR:
stow04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125441431 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
Ribonuc_2-5A
PDZ_Tricorn
AAA_23
Motif
Other DBs
NCBI-GeneID:
125441431
NCBI-ProteinID:
XP_048367943
LinkDB
All DBs
Position
LG12:complement(20191009..20292807)
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AA seq
1536 aa
AA seq
DB search
MSGSQSAITDRFPLKKPTRHGSILSRESPADKKQKVERCISAHDFDPTDSSSRKTKYSSE
ESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQILLADSEMDPAACTSGSMSPVTTSPH
SPGASGNTERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQSLQEDYSRTPVPRLLK
EIQEAKKHIPQLQEQLYKATGSAQDGILSSKSATEPLQFSEVDAESGEGLSKGDCSFGEG
SQSNSDTAESPRSGPKERIYLEESPEKSEIQDSDSQSSIGSPSSRIAPPIIGAEDDDFDA
EHEQINGQCSSCFQNIELLKSRPAHLAVFLHHVVSQFDPASLLCYLFADLYKQTNTKETR
RVFTEFNQFFLERASNLRVPVPDEISADLEKRRLELIPEELHRHYIQTMQEKVFPEVQRH
LEDFRQKRSMGLTLAEGELTRLDAERFRDRAALERERACAEQILTKIEEVLMTSQPVEEE
KSSAVQYVVLAYMKHLGVRVKEPRNLDHKRGRIGFLPKIKQSIKKEKEGDEKKRRVFPNI
LGPPRRPSRHDSYAIGRAMELQKQRHPKHLSSPSSISPEPLDPGKMRQSGSGDSTDVPYS
PANPVSPLAAGTFSSQEGSKDSETGSKTVGEAPSCSDSMDGTPRTPNPIFDFPSPPLDHL
QEEEGELDRLADLGTPKSFRKMESVGAGDNQSEDELFVVDLETDLPNWQQLVSREVLHSL
KPYEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILPASDLRNIFSNLEEILQL
HAGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGAGEEKLKQATATFCSNQPFALEVIKSR
QKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDSIAKYSEQPEEKEKVK
KAADHCRQILNYVNQAVKEAENKQHLEDYQRRLDLSYLKQLEGPMLDEFRNLDLTKKKMI
HEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIK
LNTVLVRQVATDNKAFFVISMSENGAQIYELVAQTVSEKTVWQDLIARMAGTVKVARGRR
AIPLPQPGPCEDDREEEDQQKLKEEQATPDSSMPSPDKDLGLESPLMLKAQSPSTAMSEK
LVEEELLEASRPFGKGPPTDLLIKESSEHYGPPSSEHVAQISEERWALDALRNLDLLKQL
LMQQLGLSEKEALEDHQHFSRHRTVSQGAQVETSVQRISRHLFSKTSPPGVSRIPSGMGT
STCEPCYGHQTSGEFLQPGDTTSSNNQLTDPLSTNPDIPATELEGVGAEDSGEHFFDARE
GHSDENQSEGEVAERKEEEEVQLRISGNYLILDGYSTMQESSTDEEVSSLTQRSTAGSGA
TDSAPQQRTSLPDTQSDRGSSLFVEEFMTSHWEAAEEPSSGVPSPPFSVESCAQIMRYIQ
KIAADLERLKEVEENYATLQQRLAGSAPANEHSDKS
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcacagtccgcaatcacggacaggtttcccctcaaaaaacctacaaggcat
ggcagcatcctgagcagagagtctccagcagacaagaagcagaaggttgagcgctgcatc
agtgcccacgactttgaccctacagatagctcctccaggaagacaaagtatagctcagag
gagagtagatccgagacgtatggtcttgtccagcgttgtgttattatccagcgagatgaa
aatggatttgggctgacggtcagtggagacaatccagtattcgtgcagtcagtcaaagaa
gatggagcagccatgcgggccggagtccaaactggtgaccgaatcattaaggtgaatggg
acgctggtaacgcactcaaaccatttggaggtggtgaagctaataaagtcgggctcctat
gtagctctcactgtacaggggcgccctcccgggtcgccccaaattctgttggccgattct
gaaatggatccagcagcatgtacgtccggcagcatgtctcctgtcacgacatctcctcac
tcaccaggagcatctggaaacacagagagaattaccagcccagtgctgatgggggaagaa
aataatattgttcacaaccagaaagtagagattttgagaaagatgttgcagaaggaacag
gagcggttgcagtccttgcaagaagactacagccgtacgcctgttccccgactactcaag
gagatccaggaagccaagaagcacatcccccagctgcaggaacagctgtacaaagcaact
ggttctgcgcaggatggcattttgtcttccaaatctgcaacggagcctttgcagttcagc
gaggtggatgctgagagtggggaagggctgagcaagggagactgcagctttggcgaaggc
tcccagtcgaacagcgacacagccgagagtccccggagtggcccaaaggagcggatctat
ctggaggagagcccagagaagagtgagattcaagattctgattctcagtccagtattgga
agtccctcttctcgcatagcacctccaatcataggagcagaggatgacgattttgatgcg
gaacatgaacagatcaacgggcagtgcagcagctgtttccaaaacatagagttgctgaaa
tctcgtccggctcacctggctgtcttcctgcaccatgttgtgtcccagtttgaccctgct
tcactgctttgctatctttttgcggacctgtacaagcaaaccaacaccaaagagacccgt
cgtgttttcacagagtttaatcagttcttcctggagcgagcatcgaatctgagggtccca
gttccggatgaaatttctgcagatctagaaaaaaggaggttagaattaattcctgaagag
ctacatcgccactacatccaaactatgcaagagaaagtctttcctgaggtccagaggcac
cttgaagatttcagacagaaacgcagcatggggttgactctggcagaaggggagctgacc
agactggatgcagaacgctttcgggaccgagctgcgctggagagggagcgagcatgtgcg
gagcagatcctgaccaaaattgaagaagtgttgatgacctcccagcccgttgaagaagaa
aagagttcagctgtgcagtatgttgttcttgcctacatgaaacacctcggtgtgagagtc
aaagagccccggaatctagatcacaagcgggggcggatcgggttcctgccaaagatcaag
caaagtattaagaaggagaaggaaggggatgaaaagaagagaagagtctttcccaatatc
ctgggacccccaaggaggccgagccgccatgatagctatgcaataggcagagccatggag
ctgcagaagcagcgccacccaaagcacttatcctcaccttcctcgatcagcccagagcca
ctggatcctggaaagatgcgccagagcggctccggcgacagcacggatgtaccctactcc
cctgctaaccccgtgtccccacttgcagctgggaccttctcttcccaggaagggagtaag
gacagtgaaacaggatcaaagacagttggagaagctccgtcttgtagtgactccatggat
ggcacacctcgcacgccaaaccccatcttcgatttcccttctcctcccctggaccatttg
caggaagaagagggagagcttgacaggttagcagatttgggaactccaaagtctttccgc
aagatggagagtgtgggcgctggagataaccagagtgaagacgagctgtttgtcgttgac
ctggagacagacctgcccaactggcagcagctggtgagccgggaggtgctgcacagcctc
aagccctatgagatcaaacgccaggaagttattaatgagttgttctacaccgagcgtgct
catgtccgtacactgaaagtcctcgatcaggtcttctaccagcgggtgtcccgtgaaggg
atcttgcctgcctctgatttgaggaatatattttcaaatctggaggagatccttcagctc
cacgctgggctgaacgagcagatgaaagccgtgcgaaaaaggaacgagacatccgttatt
gatcagattggagaagacttgttaacttggttcagtggagcaggagaggagaaattgaaa
caagccactgccaccttctgcagtaaccagcccttcgctctggaggtgatcaagtcacgg
cagaagaaagactcccgcttccagacttttgtccaggatgccgagagcaacccgctctgt
cgccgactgcagctgaaagatataattcccactgagatgcagaggctgaccaagtaccca
ctgctgctggatagtattgccaaatactcagagcaacccgaggagaaggagaaagtgaag
aaggcagcagatcattgccggcaaatcctcaactacgtgaaccaagctgttaaagaagca
gagaataagcagcatttggaagactaccagcgccggctcgatttgtcctacttgaagcag
ctggagggccccatgttggatgagttcaggaatttggatctaaccaagaagaagatgatt
catgaagggcctctgacgtggaaggtgaatcgcgacaagactattgatctctacacactc
ctcttggaagacatcctagtgctgttgcaaaagcaggatgatagactggtgctgagatgt
cacagcaagatcctggcttccacagccgacagcaagcacaccttcagccctgtcatcaag
ctgaacactgtgttggttcgccaagtggccacagataacaaagctttctttgtcatctcc
atgtcggaaaacggagcccagatttatgaactggtggcacagacggtttctgaaaaaact
gtttggcaggacctcatagcccggatggcagggacagtgaaggttgccagaggccgacgg
gcaatccccttgccccaaccaggaccctgcgaagacgatcgtgaagaggaagaccagcag
aaactgaaggaggaacaagcaactcctgatagcagcatgccgagtccagataaggacctg
ggcttggagtctcctctgatgctgaaggctcagtccccttcaacagccatgtctgagaag
ctggtggaagaggagctcctggaggccagcaggccgtttggcaaagggcccccgacagac
ctgctgatcaaagaatcctccgagcactacggcccaccaagttcagaacacgttgcccaa
atttcagaggaacggtgggcattggatgcactacggaacttggatttactgaagcagctg
ctgatgcagcagttgggcctgtctgaaaaggaagcccttgaggaccaccagcatttctcc
aggcataggacagtctcccagggggcccaggtagaaactagtgtgcagagaatatcgaga
cacttattcagcaagacatccccacctggggtgagtaggataccctctggcatgggaaca
agcacctgcgaaccttgttacggtcaccaaacttcaggtgaattcctgcagcctggggac
accacatcaagtaacaatcaattaacggaccccttgagcaccaacccagatatcccagct
acggaactggaaggagtgggcgcggaggacagcggagagcactttttcgatgctcgtgaa
ggccacagcgatgagaaccaatcggaaggcgaagtggcagaaaggaaggaggaagaggag
gtgcagttgcggatctcaggaaactatttgatccttgatggatacagcacaatgcaggag
agctccacggacgaggaggtgtcttcactgactcagcggtccactgcaggcagtggtgca
acggactctgccccccaacagcggacgtccctgccggatacccagtcggaccgaggaagc
tcgctgttcgtggaggaattcatgacctcccactgggaagctgcagaggaacctagctca
ggtgtaccaagccctcccttttcggtagagtcgtgtgcccagataatgcgttatatccag
aagatagcggctgaccttgaacgcttaaaggaagtggaggagaattatgccactcttcag
caaaggctggctggatcagcccccgcaaacgagcactcagataaaagttaa
DBGET
integrated database retrieval system
