Sphaerodactylus townsendi (Townsend's least gecko): 125441502
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Entry
125441502 CDS
T08213
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125441502 (DSCAML1)
Cell adhesion molecules [BR:
stow04515
]
Immunoglobulin superfamily
DSCAM family
125441502 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Interfer-bind
fn3_2
V-set_CD47
Sp38
ChitinaseA_N
DUF6410
Motif
Other DBs
NCBI-GeneID:
125441502
NCBI-ProteinID:
XP_048368069
LinkDB
All DBs
Position
LG12:25934556..26124508
Genome browser
AA seq
2168 aa
AA seq
DB search
MWLVTCLLLLHSWARPVCTEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPTATLRW
YLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSVGKIRSPSIRV
KAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITFY
GGLYISDVQKEDALSTYRCITKHKHSGETRQSNGARLSVSDPAESIPAILDGFQSREVKA
GQLVELPCIASGYPNPAIRWVKDGRPLPADSRWTKRLTGLTISDLRVEDSGTYICEVTNT
FGSAEVTGILAVIAHVLWPGNLMSVVQAQGCDWPPGRKATEGDIGRELLTPSCSSTDVSH
RGFSNCVEVAATLLAQSHESSQVLCKRLPGAALEHCCLVCPTLGTLSERHGFAVGWCKED
GKWLSRALLDFMPSAFWLQIPGTEPGVSASELSPQALPDFGEPGSLRGALGVVGMGRDLP
AAPWLLQLTSRCGSLPDGTPRIVSPFSEKVVNPGEQFSLMCAAKGAPPPTITWALDDEPI
QRDSSHRTNQYTMSDGTTVSHMNVTSPHIKDGGVYRCAARNSVGSAEYQARINVRGPPSI
RAMKNITAVAGRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQVVFENGTLKLMDVQKGM
DEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRI
TWRKDGQVIISGSGITIESKEFMSSLQISSVSLKHNGNYTCIASNDAATVSLPSGSSCRK
LEVRGEPRQVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPV
PLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMVTSHPNTT
IAIKGQAKELNCTARGERPIIIRWEKGDTVIDPDRNVRYSITTKDNGDEVISTLKLKPAD
RGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIIT
GFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELT
ISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS
IVEMKATGDNEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVR
ALSITSDVAVISWSEPPRSTLNGVLKGYRIIFWSLYVDGEWGEMQNITTTRERVELRGME
KFTNYSVQVLAYTQAGDGVRSNVLHIQTKEDIPGPPAGIKAVPSSSSSVVVSWLPPTKPN
GVIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQYLLWVAAVTSAGRGNISE
KVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCHSVGEPAPAVKWTKDSEDSAIPVTVDG
HRQIQPNGTLILRSVKAEDSGYYTCTATNTWGFDTIIVNLLVQVPPDQPRLTVSKTSASS
ITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLDNLKCGTWYKVKLAAK
NSVGAGRISEIIEAKTHGREPSFSREHHLFTHINSTHARLNLQGWNSGGCPILAIVLEYR
PKGTWVWQNLRANYSSEVFLTELREATWYELRMKACNSAGCGNETVQFATLDYDGSTIPP
IKSAHGEGDDVKKLFTIACPVILATLGVALLLVVRKKRKEKRLKRLRDAKSLAEMLISKN
NRSFDTPVKGPPQGPRLHVDIPRVQLLIEDKEGIKQIGDDKATIPVTDTEFNQAVNPQSF
CTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSVHSTRNRYSSQWTLSKCQASTP
ARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHA
KLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKPQD
SDRGKSVAVPIPHRANKSDYCNLPLYVKSEAFFRKPDHPEPCPAVPPREASIRNLARAYH
TQTRHLTLDSSSKALAVPHGNAATTTLPQRTLTMSGLASAATPAAAAPIAAPISGTEPAP
APSVEPRLPPSTKMGGSRDSLLEMSTSGIGRAKTEGCLAPAQSPTCAECSDWPQANTDFC
SFPAVAPY
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtcacttgtctccttctgctccactcctgggcccggccagtgtgcactgaa
gacgttggaaccagcctctactttgtgaacgattccatccagcaggtgaccttctccagc
accgtcggagtggtgatcccatgcccagcagccgggtcccccaccgccacccttcgctgg
tacctagccactggggatgacatctacgatgtcccacacatccgccatgtccacgccaac
gggacgctgcagctctacccattctcgccatctgccttcaatagctttatccacgacaac
gactatttctgcaccgcagagaactctgtaggcaaaatcaggagcccaagtatccgggtc
aaagcagttttcagggaaccttacacagttcgagtggaggatcaaaggtcaatgcgtgga
aatgtggctgtgttcaagtgcctcatcccttcttcagtgcaagagtatgtcagtgttgtg
tcctgggagaaagacacggtttctatcatccccgaaaacagattttttattacattctac
ggagggctgtacatctctgacgttcagaaggaagatgccttgtccacctacagatgtatc
accaagcacaagcacagcggcgagacccggcagagcaacggagcccgtctgtctgtctca
gacccagcagaatccattcctgccatcttggatggcttccagtcccgggaggtgaaggcc
ggccagctggtggagctgccctgcattgcttctggctacccgaaccctgccatccgatgg
gtcaaggacggtcgcccactacctgcggacagcagatggactaaacgactcacgggcttg
acaatcagtgacctgcgagtggaggacagtggaacgtacatctgtgaagtcacaaacacc
tttggctctgcggaggtcaccgggattcttgcagtgattgcccatgtgctgtggcctggg
aaccttatgtctgtggtgcaggcccaagggtgtgactggccaccaggcaggaaggccacg
gagggggatataggaagggaactcctcacaccctcctgttcctcgaccgacgtgtctcac
aggggattctccaactgtgtggaagttgctgccacgttgctggctcagagtcatgagtcg
agtcaggtcctatgcaagaggctgcctggcgctgcccttgagcactgctgccttgtgtgc
cccacccttgggactttaagtgaaaggcacgggtttgccgtgggctggtgcaaagaagac
ggcaagtggctgtcgagggccctcctggacttcatgcccagtgcattttggctgcagatt
ccagggactgaacccggggtctctgcttctgagctgagcccccaggcccttcctgacttt
ggtgagcccgggagtctacggggggctctaggggtcgttgggatgggccgggacctgccc
gctgccccgtggctgctccagctgacttctcgctgtgggtctctgccagatggaacccct
cgcatcgtctcgcccttcagcgagaaggtggtgaacccaggagagcagttctccctgatg
tgtgccgccaagggggcccccccgcccaccatcacctgggccctggacgacgagcccatc
cagagagacagcagccaccgcaccaaccagtacaccatgtccgatggcacaaccgtcagc
cacatgaacgtgaccagcccacacatcaaggacggaggggtctatcgctgtgccgcgcgg
aactcagtgggcagcgccgaataccaagcgcgaataaacgtaagagggccccccagcatc
cgcgcaatgaagaacatcacagccgtggccgggcgggacaccttcatcaactgcagggtc
atcggctacccgtactactccatcaaatggtacaaggactctctgctgctgccggacaac
caccggcaggtggtctttgagaacggcaccctcaagctgatggacgtccagaagggcatg
gacgagggggagtacctgtgcagtgtcctcatccagccgcagctctccatcagccagagc
gtccatgtcaccgtcaaagtgcctcccctgatccagcccttcgagttccctccggcctcc
atcgggcagctcctctacatcccgtgcgtcgtctcctcgggagacatgcccatccgcatc
acctggaggaaggacgggcaggtcatcatctctggctccggcatcaccatcgagagcaag
gaattcatgagctccttgcagatctccagcgtctccctcaagcacaacggcaactacact
tgtattgccagcaacgacgctgctaccgtcagcttacccagcggcagctcatgtcgtaag
cttgaggtgaggggggagccaaggcaggtccctcctcgctttgtggtgcagcccaacaat
caggacggaatctatgggaaagcaggagtgctgaactgctctgtggatggctaccctccc
ccaaaggtcatgtggaagcatgccaaaggcagtggaaacccccagcagtaccatccagtc
cccctcactggccgcatccagatcttacccaacagttccctgctgattcgacatgttttg
gaagaggatattggctactatctgtgccaggcaagcaacggagtcgggacagacatcagc
aagtccatgttccttactgtgaagatccctgccatggtcacctcccaccccaacaccacc
atcgccatcaaggggcaggccaaggagctgaactgcacggcccggggcgagcggcccatc
atcatccgctgggagaaaggggacacggtcatcgaccccgaccggaatgtccgctactcc
atcaccaccaaggacaacggggacgaggtcatctccacgctcaagctgaagccagccgac
cgcggggactccgttttcttctcatgccatgccatcaactcctacggagaagaccgaggt
ctcatccagctcactgtccaagagcccccagaccctccagagctggagatccgggaagtg
aaggctcgcagcatgaatttgcgctggacacaaagatttgacggcaacagcatcatcact
ggctttgacatcgagtacaagaacaagtcggactcttgggacttcaagcagtccacacgc
aacatctctccaaccatcaaccaggccaacatcgttgacctccaccccgcctctgtctac
agcatccgcatgtactcgttcaacaagattggccgcagcgagcccagcaaagagctcacc
atcagcacagaggaagcagctccggacgggcccccgatggacgtcaccttgcagcccata
acttctcagagcattcaagtcacatggaaggcccctaaaaaggagctccagaacggggtg
atccgaggctaccaaattggctatcgggaaaacagtcctggaagtaacgggcagtacagc
atcgtggagatgaaggccactggagacaacgaggtctacaccctggacaatctgaagaaa
ttcgcccagtatggggtagtggtgcaggccttcaatcgggctggcacgggcccctcgtcc
agtgagatcaacgccacgaccttggaggatgtacctagccagcccccagaaaacgtgagg
gccttgtccatcacctctgatgtggccgtcatctcgtggtctgagcctcctcggagcacc
ctcaatggcgtcctgaagggctaccgcatcatcttctggtccctctacgtggatggagag
tggggggagatgcagaatatcaccactacccgggagcgagtggagctgcgcggcatggag
aagttcaccaactacagcgtgcaagtcttggcctacacgcaggcgggcgatggcgtccgc
agcaacgtgctccacatccagacaaaggaagacattcctggcccccctgctgggatcaaa
gcagtcccttcctcttccagcagcgtggtggtgtcttggctcccacccaccaaacccaac
ggggtcattcgaaagtacaccatcttctgctccagcccgggctctggtcagccggcaccc
agcgagtatgaaacgagccccgatcagctgttctaccgtattgcgcacctgaaccggggg
cagcagtacctgctgtgggtggcagctgtcacttcagccggacgcggcaacatcagcgag
aaggtcaccattgaacctgctggaaaagcccctgccaagatcatttcttttggaggcacg
gtcaccactccgtggatgaaagatgtgcgcctgccctgccattcagttggggagcctgcc
ccagctgtgaaatggactaaagacagtgaggattccgccatcccagtgacggtggacggg
catcggcagatccaacccaacggcactctgatcctgcgctcggtgaaagcagaggactct
ggctactacacctgcacagccaccaatacctggggcttcgacaccatcattgtcaacttg
ctggtgcaagtccccccagaccagccccggctgaccgtatcgaagacctctgcgtcatct
atcaccttggcatggatccccggcgacaatggcggcagctccatccgaggctttgttctc
cagtattcagtggacaatagtgaggagtggaaagacgtattcatcagttcctcggagcgt
tccttcaagctggataacctgaaatgtgggacgtggtacaaggtgaaactggcagccaag
aacagtgtcggagctgggcgcatcagtgagatcattgaggccaagacgcatggcagagaa
ccctccttcagcagggagcatcatctcttcactcacattaactctacgcacgcccggctg
aacctgcagggctggaacagcggtggctgcccaatcctggccattgtgctggagtaccga
cccaagggcacctgggtgtggcagaacctgcgtgccaactactccagcgaagtgtttctg
actgagctgcgtgaagccacctggtatgagctgcgtatgaaggcctgtaacagcgctggt
tgtggcaacgagactgtgcagtttgccaccctggactacgatgggagtaccattccgccc
atcaagtctgcccacggggagggagacgacgtgaaaaagctcttcaccattgcctgccca
gtcatcctggccacgttgggggtcgcactgctcttggttgtccgcaaaaagcgcaaggag
aagcggctgaagcgcttgagagatgctaagagtttggctgaaatgctcatcagtaagaac
aaccgcagtttcgatactcctgtgaagggccccccgcaaggcccccggctgcacgtagac
atccctcgcgtccagctcctcatcgaggacaaggaaggcatcaagcagattggagatgac
aaagcaaccatccctgtgactgacacggagttcaatcaggctgtgaaccctcaaagcttc
tgcactggtgtctccctgcaccatccggcgctaattcagaacacagggcccttgatcgac
atgtctgacatccgtccaggcacaaacccggtttccaggaaaagtgtgaagtcagtgcac
agcaccaggaaccgatactccagccaatggacactcagcaagtgtcaggcgtctacccct
gcccggaccctcacctctgactggagaacggttgggtctcagcacggtatcacggtgaca
gaaagtgacagctacagcgcaagcctgtctcaggacacggacaaagggcggaacagcatg
gtgtccacagagagtgcctcctccacgtacgaggagctggcccgtgcctacgagcatgcc
aagctggaggagcagctgcagcatgccaagttcgagatcaccgagtgcttcatctcagac
agctcctcagaccagatgaccacgggcaccaacgagaatgccgacagcatgacttccatg
agcacgccctcggagccaggcatctgccgcttcacggcctcccctcccaagccgcaagac
agtgaccggggcaagagcgtggcagtgcccatcccccacagagcaaacaagagtgattac
tgcaacctgcccttgtatgtgaaatccgaagcgttcttccggaagccagaccatcctgaa
ccctgtccagccgtaccccctcgggaggcctccatccggaacttggctcgggcctaccac
acgcaaacaaggcacctgactctggactccagcagcaaagccttggcagtgccacacggg
aacgcagccacgaccactttacctcagcgaactctcaccatgtctggcttggcgagtgct
gccactcctgctgccgctgcccccattgcagcccccatctcaggcacagaacccgctcct
gcccccagcgtggagccccgcctgcctcccagcaccaaaatggggggctccagagactca
cttctagaaatgagcacgtcaggtatagggagggcgaaaactgagggctgcttggcacct
gctcaaagtcctacctgcgctgagtgtagcgattggcctcaagccaacacggacttttgc
tcttttcctgcggtggccccatattga
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