Sphaerodactylus townsendi (Townsend's least gecko): 125441536
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Entry
125441536 CDS
T08213
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04010
MAPK signaling pathway
stow04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125441536
04020 Calcium signaling pathway
125441536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125441536
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125441536
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
125441536
NCBI-ProteinID:
XP_048368102
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All DBs
Position
LG12:40515905..40802542
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AA seq
2422 aa
AA seq
DB search
MLICDGNKTMLIQSFTAMLKVILATAGTQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSI
MKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKACFSNETEERVGEFPCGEESPARQC
DKGAVCQKYWEGPNFGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFI
PLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEE
VMLAEEDKNAEEKSPLDGRATSEGPILRGTTAVEISSGGSYNMLKRATIKKSKNDLIHAE
EGEDHFTDVCSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWIVLCVV
TLNTLCVASVHYDQPEGLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFG
VIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISL
LFLLFLFIVVFALLGMQLFGGQFHFNDETPTTNFDTFPTAILTVFQILTGEDWNAVMYQG
IESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQK
LALQKAKEVADVSPLSAANISIAAKQQNASKSKSVWEQRTSQIRMHNFRTSCEALYNELD
PEDRVRYATTLHIRPDMKTHLDRPLVVEPRSGEGPNGNGSKLSPTDVQESAEQAKTEPAE
GTEGPRKHHRHRDKDKAVEQEKSNVPKEENGESGTNNKEERHRPHRSRSKEGEGGGKEGK
SECSRTQEGGRRHHRRGSVEEGAEREHRRHRSHRHLVERQAKEGNGTVNGAKTERRSRHR
GGSRPGNREGDPGSKGEGGEEPHRRHRMRHKALSTYAAAYLPRDRRYPPQAPLIWSCGEG
CKIGPQHGQEDGKAAGSPPALSSSGALNPAHVVINMCGAKEAKGPPNLTPPPGCQFPSNP
TPLPALSRQLAVPSALPSGREGQCDTEAGGSVIVAPLHTLPSTCLQRVPEQPEDADNQKN
VTRMGQPSLEKTTTVNIPVTVTAPLGEATVIPINNVEFETKTEEKKDMDADDLTKNGPKP
ILPYSSLFILSPTNPIRRLCHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNEAL
KYLDYIFTGVFTFEMVIKMIDLGLILHPGSYFRDLWNILDFIVVSGALVAFAFSSVMGQN
KGKDINTIKSLRVLRVLRPLKTIKRLPKFSAFESTEAEDTEGLGEKLYQTTSDSKEEMPE
EMPTNGTESEESTQEEGEMASMAFPNGFYSRTLAEIADQCMLSARSFQLIEKRLTSVAAH
LPNRHQRDLLGTGVFPRAKAHQGMNMAPSPTSSTTKSPEACRQPPVRDPLRETVFLGCKT
LENDVSSSFKLLPQNEQEAVLQRIGQMRTHLYERYNWQKLQKQVGDEFNRETNDRSLLNV
SQEMEGRQEMEEAWQNLEVNIESATSKGQYLDYEKDEVEAQPRKWNKYEFHYDNVLWALL
TLFTVSTGEGWPTVLKHSVDATYENQGPSPGFRMEMSIFYVVYFVVFPFFFVNIFVALII
ITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYF
IMVMIALNTIVLMMKFYDAPAPYEEMLKCLNIVFTSMFSLECVLKIIAFGALNYFRDAWN
IFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSF
KALPYVCLLIAMLFFIYAIIGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEA
WHEIMLSCLSHQACDKLSKLSKNECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYL
TRDSSILGPHHLDEFIRVWAEYDPAASCRIHYTDMYNLLRAIAPPLGLGKKCPHRVAYKR
LVRMNMPISNDDLSVHFTSTLMALIRTALEIKLASGEVGVLQHQCDAELRKEISLVWPNL
SQKTLDLLVPPLKPEAMTVGKVYAALMIFDFYKQNKNTREPGHPASGQTGTVSLFHPLKA
ALEQSQPVFPTAFLRQKSSASLNNGGALPPPEGRGIKESVSWGTQRTQDVFYETRTRAVE
RGHSEEIAVDQTSKQVVEMQEISPTLANGEQQPGLESQGRAASMPRLAAETQRSRARSPG
RYLAPIPDTSPMKRSISTLNPQRPHATHLYEHSRPAEHTHHHHHHRCHRRKEKKQKSIDK
PSNNLAAGSVAPAIDPQCEIKNNGSGSGNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSI
TYKTANSSPVHFSSFQTGLPTFSPGRLSRGLSEHNALLHGDSQGPSQTLVARIGSDPYLG
HREDSDSPYHIVPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHYTLGRG
SGPGTSTRACSYYHERDEDDWC
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgcttatttgtgatggcaacaaaacaatgctgattcagagcttcactgccatgttgaaa
gtgatcctggccacagctgggacccagtttgaccttcggactctgagagctgttcgagtg
ctgaggccgttgaagcttgtctccggaatcccaagtttgcaggtggtcctgaagtccatc
atgaaggcaatggtgcccctccttcagattgggctgcttctcttcttcgccattgtgatg
tttgccataatcggactggagttctacatgggcaagtttcacaaagcgtgtttctccaat
gaaacagaagagagggtgggagagttcccctgtggtgaggagtcacctgccaggcagtgt
gataaaggagccgtgtgccaaaagtactgggaaggccccaactttggaattaccaacttt
gacaacatcctgtttgctgtgctcacagtcttccagtgcatcaccatggaagggtggaca
gacatcctctacaatacaaatgatgctgcaggaaacacctggaactggctttacttcatc
ccgctcatcatcattggttcctttttcatgcttaacctggttcttggtgtgttgtcaggg
gagtttgccaaagagcgagagagagttgaaaaccgtcgggccttcttaaaactccggagg
cagcagcagattgaaagagaactcaatggctacttggagtggatctttaaggcagaggag
gtgatgttagctgaggaagacaagaatgctgaagagaagtcccctttggatgggagggcc
acttctgaaggcccaattttgagaggcacaacagcggtggagattagcagcggcggcagc
tataacatgttgaaaagggccacaataaagaagagcaaaaatgaccttatccacgctgaa
gagggagaggaccacttcacagatgtttgctctgttggatcaccctttgcccgtgccagc
ttgaagagtggtaagaatgaaagctcctcctacttccgcaggaaagagaagatgttccgc
ttcttcatccggcgcatggtgaaagcacaaagcttctattggattgtcctgtgtgttgtt
acccttaacacactgtgtgttgccagtgtccactatgaccaaccagaagggctcactaca
gcactatattttgcagagtttgttttccttggtctgttccttactgagatgtccctgaag
atgtatggcctggggccaaggaattatttccattcctcattcaactgctttgactttggg
gtgattgtgggcagtatctttgaagtcatctgggcggccgtgaaacctggagcatccttt
ggcatcagtgtgttgagggctcttcgactgctgaggattttcaaagtcaccaagtactgg
aactccctgaggaatctagtggtctccttgctgaattctatgaaatccattatcagtttg
ctgtttcttctcttcctcttcattgttgtatttgctttgctggggatgcagctctttgga
ggacagtttcattttaatgatgaaacaccaaccaccaattttgatactttccccacagcc
attctgactgtatttcagattctgaccggggaagactggaatgcagtgatgtaccagggg
atagaatctcaagggggtgtccactcaggaatgttctcttcgatctacttcattgtcttg
acgctgtttggtaactatacgctgttgaacgtcttcttggccatcgctgtggacaacctt
gccaatgcacaagagctgaccaaggatgaagaggagatggaggaagctaccaatcaaaaa
ctggccctgcaaaaggccaaggaggtagcagacgttagtcccctgtctgcagctaacatt
tccatagcagccaaacagcagaacgcctccaagtcgaaatctgtgtgggagcagagaacc
agccagatccgtatgcacaattttcggaccagctgtgaagcgttatataacgaactggac
ccagaggatagggtgcgctatgctaccaccctccacattcgtccagacatgaaaactcat
ttggatcggcccctggtggttgagccaaggagtggcgaaggccccaatggcaatggaagt
aagctaagccccaccgatgttcaggaatcagcagagcaggccaagactgagccggccgag
ggcactgagggtccccggaagcaccatcgacacagagacaaagacaaggctgtggagcag
gaaaagagcaatgtgccaaaggaagagaatggggaatctggcacaaacaacaaggaggag
cgccacaggcctcacaggagccggagcaaagagggagagggtggcggcaaagaggggaaa
agcgagtgcagcagaacccaggaaggaggtcggcggcatcaccgccgcggttcagtggaa
gaaggagctgagagggaacacagacgccaccgcagtcaccggcacctggtggagcgacaa
gccaaggaaggcaatggcacagtcaatggcgccaagacggagcgccgctcacggcaccga
ggaggatccaggcctgggaatcgggaaggagatcccggctctaaaggagagggtggcgaa
gaacctcacaggcgacacaggatgcgtcataaggcactatcgacctatgcagcggcgtat
ttacctagggacaggaggtaccctccccaggcgccactgatctggtcatgtggggagggg
tgcaaaattgggccccaacatggccaggaagatggcaaggcagcaggaagtcctcctgct
ttgtcatcttctggtgccctcaaccccgcccatgttgtcatcaacatgtgtggggccaag
gaagcgaaaggacccccaaatctcactccccctcctggctgccagttcccctcaaacccc
actcccctcccagctctgagccggcagctggcagtcccttctgccctcccctctggaagg
gaaggtcaatgtgacacagaggctggtgggagtgtaatcgttgctccactgcacaccctg
cctagtacctgtctacagagagtgcctgaacagccagaggatgctgacaaccagaagaat
gtcacccgcatgggtcagccatcactggagaaaaccaccactgtgaatattccggtcact
gtcactgctcctctgggggaagctaccgtcattccaattaataatgttgaatttgaaaca
aaaacagaagagaagaaagacatggatgctgatgacttgacgaaaaatggaccgaaacca
attctaccttacagctccttgttcatcctcagtcctaccaacccaatccggcgcctttgc
cattacattgtgaacctccgttactttgaaatggtcatcctcattgtgatagccctgagc
agcattgcgttggctgctgaagacccagttcaagccgagtcgccaaggaatgaggctctc
aagtatctggattacatattcactggtgtctttacttttgagatggtgataaagatgatt
gacctgggcctgatcctgcaccctggctcctatttccgtgacctctggaacatcctggat
tttattgtggtcagtggggctcttgtggcctttgccttttcgagtgtcatgggacaaaac
aaaggcaaagatatcaacacaatcaagtccctgcgagttctgagagtcctccggcctctg
aagacgatcaaacgcctgccaaaattctctgccttcgagagcacggaagcagaggataca
gagggtcttggagagaaactttatcaaactacctccgatagtaaagaggaaatgcctgag
gaaatgccaacaaatgggactgagagtgaagaaagtactcaggaggagggggaaatggct
agtatggctttccctaatggcttctactcaagaactctggctgagattgcagaccagtgt
atgctgtcagcaagatcatttcagcttattgagaagaggcttacttcagtggcagcacac
ctgcctaacagacatcaaagagatctgcttggaacaggggtctttcctagggctaaagct
caccaaggaatgaatatggctccatctcccacttcttcaactactaagagtcctgaggcc
tgcagacaaccaccagtgagagatcccttgcgtgagacggtgttcctgggttgcaagacc
cttgaaaatgatgtaagctcatctttcaaactcctgccacagaatgaacaggaggcagtc
ctgcagcgaattggtcaaatgaggacccacctatatgaaaggtacaactggcagaaactc
cagaaacaagttggagatgagttcaacagggagacgaatgacaggagtttgctgaatgtc
tcccaggaaatggagggtcggcaagaaatggaggaagcttggcaaaatctggaggtcaat
attgagagtgccacctctaagggccagtatttggattatgagaaggatgaggtggaagct
caacccaggaagtggaataaatatgaattccactatgacaacgttctctgggctttactg
acactgttcacggtgtctacgggagaaggatggccaaccgttttgaagcattccgttgat
gcaacgtacgaaaaccaaggcccaagccccggtttccggatggagatgtctatcttttat
gtggtgtatttcgttgtcttccctttcttctttgtcaacatctttgtggctttaatcatc
atcaccttccaggagcagggtgacaaagttatgtctgaatgcagcctagagaaaaatgag
agagcctgcatagacttcgccataagtgccaaacctctaacccgctacatgcctcaaaac
aagcagtcgttccagtacaagatgtggaaatttgtggtgtctcctccttttgagtatttt
atcatggtcatgattgcactcaacaccattgtgctgatgatgaagttctatgacgctcca
gctccgtatgaagaaatgctgaaatgcctcaacattgtgtttacctccatgttttcattg
gagtgtgtgttgaagatcattgccttcggtgcactgaattactttcgtgatgcctggaac
atctttgattttgtcactgtcttgggaagtattactgatattttagtaacggagattgcg
gacacggacaatttcatcaacctcagcttccttcgactgttccgggctgcaagactcatc
aaactccttcgccagggctacaccatccggattttgctctggaccttcgtccagtctttc
aaggccttgccatacgtgtgtctccttattgcgatgctgttcttcatctatgccattatt
ggcatgcaggtctttggaaacattgcgctggatgatgacacatccattaatcgccacaac
aacttccgaacattcttgcaagccctgatgctactttttcggagcgctactggggaagcg
tggcatgaaatcatgctctcatgcctcagccatcaagcctgtgacaagctctccaaactc
agcaaaaacgaatgcggcagtgactttgcctatttctactttgtctccttcatcttcctc
tgttcctttctgatgttgaacctgtttgtggctgtgatcatggacaactttgagtacttg
acacgagactcttccatcctaggaccccaccatcttgatgaattcattcgcgtttgggca
gagtatgaccccgcagccagttgccggattcattatacggatatgtacaatttattacga
gctattgctccacctctgggcttaggaaagaagtgtccacatagggtggcatacaagcgc
ttggtgaggatgaacatgcccatctcgaacgacgatctgagcgttcacttcacatctacg
ctgatggccttgatccggactgccctggaaatcaaacttgcatcaggtgaggtgggggtc
ctgcagcaccagtgtgatgctgaactgaggaaggagatctccctggtttggcccaatctc
tcccaaaagactttagatctattggtacctcctcttaaacctgaagcaatgacagtggga
aaggtctatgcagccctcatgatatttgatttctacaagcagaataaaaatacccgagaa
ccaggtcatccagcctctggccagactggaacagtctccctattccacccgttgaaagct
gccctggagcaaagccagccagtattccccaccgctttccttcgtcaaaagagctcagct
tctctcaacaatggtggggctttaccgccaccagaaggaagagggatcaaggagtccgtt
tcttggggaactcaacgaactcaggatgtgttttacgaaaccagaacacgagcagttgag
cgaggccactcggaggaaattgctgtggatcagacaagcaaacaggtagtagaaatgcaa
gaaatcagcccaacgctagccaatggtgaacagcagcctggtttggaaagccaggggcga
gccgcttccatgccacgtttggcggctgaaactcagaggagccgagcacggtcaccgggg
agatacctagcacccatcccagacacaagccccatgaagcgttccatctccacactgaac
ccccagcgcccccatgccacgcacctctacgaacattcccgaccagcagagcacacccac
caccaccaccaccatcgctgccatcgacggaaagagaagaaacagaagtccattgacaag
ccctcaaacaatctggctgctgggtctgttgctccagcgatagaccctcagtgtgaaatt
aaaaacaatggcagtggctcaggtaatgggagccccctgctgtcaacctctggtgctagc
accccatgccgtggccggagacagttgccgcagacgccgctgaccccgcgccccagcatc
acgtacaagactgccaactcctcgcctgtgcacttctccagtttccaaactggcctgccg
accttctccccagggcgcctgagccgcggtctgtcagagcacaatgcattgttgcatgga
gactcacagggcccctcgcagaccctggtggcccgaatcggttcggacccttacttgggg
caccgggaggacagtgacagtccgtatcatatcgtgcccgaggacacgcttacctttgag
gaggctgttgctactaattcaggaagatcctcccggacttcttacgtctcctctttgact
tcccagtcgcaccaaatccgcagagtccccaatgggtaccattacactttgggccgtggc
tccggccctgggaccagcaccagagcatgtagctattaccacgaaagggatgaagatgat
tggtgctag
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