Sphaerodactylus townsendi (Townsend's least gecko): 125441711
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Entry
125441711 CDS
T08213
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125441711 (RC3H2)
04121 Ubiquitin system [BR:
stow04121
]
125441711 (RC3H2)
Transcription factors [BR:
stow03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
125441711 (RC3H2)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125441711 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125441711
NCBI-ProteinID:
XP_048368487
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Position
LG12:complement(31884678..31921272)
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AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHHTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKMSATVRTFPLLSKANVTSTVATTAGSVISII
GSAESAGKVAPSTNGITSLESGLPQLIPRCTDTSAMRALENVKKAGKAGTSTQNVSGSPT
DHLLESKIGSPPKTPVSQAAAASAGPPPPPPPLPVGTEMGSVPPKSSPFAPRVPIYPPRS
DNLQYFQDPRAHLSYETPQYPQAGYYPPPPTVQAGVGPCLPRFVRSSNVQEPPLPPASMP
YSDHYSTFPPRDRLSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRS
NSLPPMDVVHPSVYQTFLRERYNSLDSYYSMACQLSAEQRTVPLSREPCGHLKPAYDDPL
RRKPEQWAQCHAQKTPLVSSALPTATQSPTPPSPLFSVDFSTEFCESSNDLSNTKYEDNH
LSHYSPWSCGTISSCISAIESEPKDVIANSNAVLMDLDSSDMKRRVHLFETQRRPKEEDP
IIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSTTKPISMSDYIPYVSTVDSRWS
SYSSDSTSSAPFTERDRFIVTDISAPRRHSSTGDLLSIELQQAKSNSLLLQREANALAMQ
QKWSSLDEGSHLTLNLLSKEIDLRNGETDYTEDNAGRKPDRDIELELSALDADEPDGQVE
QMEEILSLQLGISDQDDHLFNGSALENGHSLEQSQKEPRQQKRPSLGEDLTILEKQKTIL
PVTSCFSQPMSSCTGSLPITTSTGVGSLVLKTAHVMVEGKNDFLRPVANGKLVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagcacagtggacagaatttctgtcctgtccaatctgctacaatgaa
tttgatgagaacgtgcacaagcccatcagcttaggctgctcccacaccgtttgcaagacc
tgcctgaacaagctgcaccgcaaggcctgccctttcgaccagacagccatcaacactgac
atcgacgtgcttcctgtaaactttgcacttctccagttagttggagcccaggtacctgat
caccacactgtcaagttaagtaacctaggagagaacaagcattacgaggtagcaaagaaa
tgtgtggaagacctggcactttatttaaagccgctgagcggaggcaaaggtgttgccagt
ttgaaccagagtgcgctgagccgtccaatgcaaaggaagctggtgacgctggtgaactgt
cagctggtagaagaggaggggcgggtgagagccatgcgggcagcccgctcccttggtgag
agaactgtgacggagctgatcttgcagcatcagaaccctcagcagctgtctgccaatctc
tgggctgctgtcagggcacgagggtgccagtttctagggccagctatgcaggaggaagcc
ctgaaactggtgctgctggccttagaagatggctctgccctctcccggaaagtgctggtg
ctttttgttgtccaaaggctggagccacgatttcctcaggcgtcgaaaactagcatcggc
catgttgttcagctgctgtatcgagcttcatgcttcaaggtcaccaaaagagatgaagat
tcttcactgatgcagctaaaagaggaatttcgcagttacgaagcgttgcgccgggaacat
gacgctcagattgtccacatcgccatggaagcaggacttcggatatcaccagagcagtgg
tcgtccctcctctatggtgacttggctcacaaatcccacatgcagtccatcattgacaag
cttcagtccccagaatcctttgcaaaaagtgtgcaagagctgacaatcgttcttcaacgc
actggtgaccctgcaaatttaaacagacttcgaccccatttggagctattggccaacata
gatcctaatccagatgcagcatctccaacatgggaacagctggagaatgccatggtggct
gtgaagacggtagtccacggcctggtggacttcattcagaactacagtcggaaaggccat
gaaacaccacagccacaaccaaatagcaaatacaaaaccagcatgtgccgggatctgcga
caacaaggcgggtgtccgcgtggaacaaactgcacatttgctcactctcaggaagagctg
gaaaagtatcgactgagaaacaagaagatgagtgccacggtaaggaccttcccgctgcta
agcaaagccaatgtaaccagtacggttgccaccacagcaggcagtgtcatttccatcata
ggaagtgcagaatcagcagggaaggtagcccctagcaccaacggaatcacaagcctggag
agtggcctgccacagctcattccgcggtgcactgacacctctgccatgcgggctctggag
aatgtgaaaaaagcagggaaggctggaaccagcactcaaaatgtctctggatctccaaca
gatcacctccttgaaagtaaaattggttctcctccaaagactcctgtcagtcaggcagca
gctgcctcagcgggcccacctcctcctcctcctccacttcctgttggcacagagatgggc
tctgtgccgcccaagtccagcccatttgcaccaagagtgcctatctaccctccacgctct
gacaacctacagtattttcaagatcctcgggcccatctgtcctatgaaaccccacagtac
ccacaagcaggatactacccaccaccaccaacggtccaggccggcgtaggtccctgcctc
cctcgctttgtgcggtccagcaacgttcaagagcccccacttccacctgcttccatgccc
tacagcgaccattacagcactttccccccgcgagacaggttgagctctccttaccagcct
ccaccaccacagccatatgggccagtccctcctgttccgtctggaatgtatgcccccgtc
tatgacagccggaggatttggcggccacagatgtacccccgagacgacatcattcggagt
aactccttacctcccatggatgttgtgcacccctcagtctatcagacctttttgcgagaa
agatacaactctttggacagttactattccatggcctgccagctgtcagctgagcaaagg
actgtgcctttgtcaagggaaccttgtggccacttgaagcctgcttatgatgacccacta
aggaggaagccagagcagtgggcccagtgccatgcacagaagactcccctggtgtcctct
gcccttcccacggctactcagtctccaacaccgccttcccctctattcagcgtagacttt
agcacagaattctgtgaaagttcaaatgacttaagcaacaccaagtacgaagacaaccac
ctctcccactactcgccgtggtcctgtggcacaatcagctcttgcataagtgccatcgaa
tcggagcccaaagatgtcattgccaactccaatgcggtactcatggatctggacagcagt
gacatgaagagacgagtgcatctctttgaaacccaacgaaggcccaaggaagaagacccc
ataattccgtttagtgatgggcctatcatctccaaatggggcgcaatctctcggtcatcc
cgcacgggttaccacacaacagaccccattcaggccactgcttcccaaggaagtactact
aagccaatcagcatgtcagattatatcccttatgtcagcactgttgactcaagatggagc
tcctatagttcagattctacttcatctgcaccctttacagaacgggaccggttcatagtt
actgatatatctgctccaagaaggcattccagcactggagatcttctgagcatcgaacta
cagcaggccaaaagcaactcactgctacttcagagagaggcaaatgctctggccatgcag
cagaaatggagctctttagatgaaggcagccacctcaccttgaaccttttaagcaaagag
attgatctgaggaatggagagactgactacacagaagacaatgcaggcagaaagccagat
cgagatatcgagttagaactttcagccctggatgctgatgaaccagatgggcaagtggaa
caaatggaagagattttgagcctacagcttggaatcagcgatcaagatgatcatctgttc
aatgggtcagctctggagaatggccactcattggagcagtcccagaaggagcccaggcag
cagaagaggcccagcttaggtgaagaccttactattctggagaagcaaaaaacaatcctg
ccagtgacttcctgcttcagtcagccaatgtcctcctgcacaggctccctgcccattaca
acgtctactggtgtgggcagcctcgttctcaaaacggctcatgtcatggtggaagggaaa
aatgactttttaaggccagttgcaaatggcaagttggtgaacagctga
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