Sphaerodactylus townsendi (Townsend's least gecko): 125441723
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Entry
125441723 CDS
T08213
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125441723 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125441723 (PRPF4)
Spliceosome [BR:
stow03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125441723 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
125441723
NCBI-ProteinID:
XP_048368520
LinkDB
All DBs
Position
LG12:complement(36043393..36055518)
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AA seq
531 aa
AA seq
DB search
MAALRPSAPVLRDFLKSLQGAKTKASDDSDGPPAKKAPIFYGSLEEKERERLSKGESGML
SKEAVKAAIEAGNINITTGEVFDLEDHISERQAEVLAEFERRKRARQINISTDDSEVKAC
LRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGP
NTLKTARLWIANYSLPRAMKRLEEARLLKDIPEATRTSQKQELHKSLRSLNNFCSQIGDD
RPISYCNFSPNSKLLATACWSGLCKLWSIPDCNLVHTLRGHNTNVGAIVFHPKATISLDK
KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVAWHPSGRFLGTTCYDHSWRLWD
LEAQEEILHQEGHSKGVYDVAFHTDGSLCGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY
GINFSPNGYHIATGSGDNTCKVWDLRQRRCIYTIPSHQNLVTGVKFEPNHGNFLLTGAYD
NTAKVWTHPGWSPLKTLAGHEGKVMGLDISQDGQLIATCSYDRTFKLWMAE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattaagaccctccgcgcctgtgctgagagattttttaaaatctctgcagggt
gcaaaaactaaggcttcagacgacagcgatggaccgcctgccaagaaggcccctattttt
tatggaagcctggaggaaaaggaacgagagcgactctctaagggggagtcaggcatgcta
agcaaggaggcagtcaaagctgcaatcgaggctggcaatattaacatcactactggtgaa
gtctttgacctggaagaccacatcagtgagcgccaggcagaagtcctggctgagtttgaa
cgtcggaaacgagccaggcaaatcaacatttctacagatgactccgaagtcaaggcctgc
ctgcgagctctcggagagcccatcacactttttggtgaaggccctgcagagaggagggag
aggttacgtaatattctctcagtggttggcacagatgccttgaagaagaccaagaaagat
gatgaaaaatctaagaaatcaaaagaagagtatcaacaaacctggtaccacgaagggcca
aacaccctgaaaactgccagactgtggatcgccaactactcactccctcgggccatgaag
cgattggaagaggctcggttgctgaaggacatccctgaagccacaaggacatcccagaag
caggagctgcacaaatctttgaggtctttgaataatttttgcagccaaattggggatgac
cgtccaatctcgtactgcaacttcagccctaattctaaacttctggctacagcctgctgg
agcggactttgcaagctatggtctatacctgactgcaatcttgtccacacattacgaggg
cataacaccaatgttggggcaattgtgttccaccccaaggcaaccatctccctggacaag
aaggatgtgaacctggcctcatgtgctgcagatggctcagtcaagctctggagccttgac
agtgatgagccagtggcagacatcgaggggcacacggtgagagtggcacgggtggcatgg
cacccgtctggccggttcctgggcaccacttgctatgaccactcatggcggttatgggac
ctggaggcccaggaggaaatcctgcatcaggagggacacagcaaaggggtctacgatgtc
gcatttcatactgatggctccttgtgtggcactgggggccttgatgcatttggccgggtg
tgggacctccgtacaggacgctgtatcatgttcttggagggccatctcaaggagatttat
gggatcaatttttctccaaatgggtaccacattgccactggcagtggggataacacttgc
aaagtgtgggatctgcgccagaggagatgtatctatactatcccttctcaccagaaccta
gtgactggagtgaagtttgaaccaaatcacggtaacttcttactcaccggtgcctacgac
aacacagcgaaggtctggacgcacccaggctggtcccctctgaaaaccctggctgggcat
gaggggaaagtgatgggcttggatatctcccaggatgggcagctgattgcaacgtgctcc
tacgacaggaccttcaagctctggatggcggaatag
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integrated database retrieval system
