Sphaerodactylus townsendi (Townsend's least gecko): 125441757
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Entry
125441757 CDS
T08213
Symbol
TSC1
Name
(RefSeq) LOW QUALITY PROTEIN: hamartin
KO
K07206
tuberous sclerosis 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04140
Autophagy - animal
stow04150
mTOR signaling pathway
stow04218
Cellular senescence
stow04910
Insulin signaling pathway
stow05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125441757 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125441757 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
125441757 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125441757 (TSC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125441757 (TSC1)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
RBFA
Motif
Other DBs
NCBI-GeneID:
125441757
NCBI-ProteinID:
XP_048368585
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Position
LG12:complement(49230833..49295507)
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AA seq
1164 aa
AA seq
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MAQQANVGDLLAMLDSTNLVVLEDITAAFKENLALDRGPMLVNTLVDFYLETGSQQALHI
LSTLQEPHDKHLLDKINEYMSKLPTRLPTLSLLGHVVRRQPSWKHKLSQAPLLLSLLKCL
KTDTDIVVLITGVLVLITMLPMIPQSGKQYLHDFFGIFGRLSSWCLKNPGHVAEIYLVHL
HASVYSLFHRLYGMYPCNFVSFLRSHYSMKENLETFEDVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHGVVIECAKISLDPAEASYEDGYCSVSQQPLSHVQHRPADPNGSPYLT
LHSSTGFSTSTPYSGSRLSRSHISGQLPQILNPQSSCLSTEPLQVNFWSPSAVCGMTTPP
TSPGVLSESSQASSQPHKFFGASVGKGTPSGTPATSPPPLCISDEFVHVSAPSAAAALPK
KEDKLDHGRPSLPRQQNIVINNMKALDSHGGKNSVTLSDLPGFLGDLADLEDSIEKDKED
DAISKEISEITTADAEPVVPRGGFDSPFYHFNESLSGSQKKSQSAASNAQGQIPNSDPVT
PCLDQSGIENAREMPRQAFTPIDRPCRDSEDHPAGHRESQASAETSIFTPSPYKIPDHRR
AGLGNEQPPRYEHLFEMALPKTAFLFVSKKTEELLRKAKGGQEEDGASSASPMEVLDRLI
QHGADAHSKELNKLPLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQHA
LRNRRLLRKVIKAAALEEHNAAMKDQLRLQEKDIQSLKVSLQKEQGRYRQFQEEHDSVVA
RLHNQIRQLQHDREEFYNQSQELQTKLEDCCTIIADLRLELKKANNKVCHTELLLSQVSQ
KLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHADTPKEVEIMQVAFRKDLEKAKC
YVQQQNQQLEACQKRITELESQLTKRDHLLLEQKKYLEDVKVQARGQLQAVESRYKVQKR
ITQAFELEILDLYGRLENDKLQKNLADVKMGSPEIVDESRLPESNTGSIAGHSEETLNRN
GETKLSGARGSSSGSSKGGSEVSTPEKPPNQRAGQLSRWEASVLLDSSPGGGPLTVGSLP
SSESFLGMKVRELFRNKSESQCDEDGVTINSLCDTLKMELCKDPSLEVRASPSPEDPDPS
PPTQESSVGQLHIMDYNESHHGHS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaagcaaacgtgggtgacctcctcgccatgcttgattctaccaatctggtt
gtcctggaagatataacagctgcatttaaagagaaccttgctttggatcgtgggcccatg
cttgtaaataccttggtggacttctacttggaaacgggttcccagcaagcattgcacatc
ctatccacgcttcaagagccgcatgacaagcaccttctggataaaatcaacgaatacatg
agcaagcttcctacccgcctccctactctctcgctacttggccacgtggtaaggcggcag
ccatcttggaaacataagctttctcaagcgcccctcctgctttctttgctcaagtgtctt
aagactgacactgacatagtggtactcatcacaggtgtgctcgtgctgataacaatgctg
ccgatgatcccccagtccggcaaacagtacctccacgatttcttcggcatctttggacgc
ctttcatcctggtgcctgaagaacccaggtcatgtggcagagatctacctggttcacctc
cacgccagcgtgtattccctctttcatcgcctttatggaatgtacccttgcaactttgtt
tcatttctgcgctctcactacagtatgaaggagaacttggagacctttgaagatgttgtc
aagcccatgatggaacacgtgcgcatccatccggagctggtgactggatccaaggatcat
gagctggaccctcgaaggtggaagaggctagaaacccacggcgttgtgattgagtgtgcc
aaaatctccctggacccagcggaagcatcctatgaagatggctactgttcagtctcccag
cagccgctctctcacgtgcagcaccgcccggccgaccccaatggcagcccttaccttact
ttgcacagcagcactggcttctcaacctctaccccttactctggttctcggctatcgcgc
tctcacatatcagggcagctacctcagattttgaaccctcagtcctcgtgtctgtcaact
gagcctctgcaggttaacttctggagcccctctgctgtctgcggcatgaccacaccaccc
acttcgcctggagttctttcggagtcttcgcaagcctcatcccagcctcacaagttcttc
ggcgcgtctgttggcaaaggaacaccctcgggaacacctgccacctctccccctccattg
tgcatttcagacgaatttgtccacgtttctgctccttccgctgctgctgcacttcccaag
aaggaggacaaactggatcatgggaggccttccttgccccgacagcaaaacattgtcatc
aacaacatgaaggcattagactcccatggtggtaaaaactctgtaactttaagtgacctt
cctggcttcttaggggacttggcagacttagaagacagcatcgagaaggacaaagaggac
gatgccatatcgaaagagatctctgagattaccaccgcagatgctgagcccgtggtgcct
cggggagggtttgactcccctttttaccatttcaacgagagtctttccggctcccagaag
aaatcccagtctgcagcctcgaatgcgcaggggcagatcccgaactctgatcccgtaaca
ccttgtctggaccaatctgggatcgagaacgccagggaaatgcccaggcaagccttcacg
cccatcgaccggccgtgccgagactccgaagatcatcccgctggtcacagggaaagccag
gcctctgcggagacgagtattttcacccccagcccttacaagatcccggaccacaggaga
gcagggctgggcaatgagcagcctccccgatacgagcacctcttcgagatggctttgcca
aagaccgccttcctctttgtcagcaaaaagacggaagaactgctgaggaaggccaaagga
ggccaagaagaagacggggcttcctccgcgtccccaatggaagtgctggacaggctcata
cagcacggagccgatgcccacagcaaagagcttaacaaattacccttgccaagcaaatca
gctgactggactcactttggaggttctcccccttcagacgagatccacactctgcggaac
cagctgctcttgctccacaaccagctgctgtacgagcgcttcaaaaggcagcagcacgcg
ctccggaaccggcggctcctgcggaaggtgatcaaagcggcggccctggaggagcacaac
gcggctatgaaagaccagctgaggctccaggagaaggacatccagtccttgaaggtcagc
ctgcagaaggagcagggcagataccgccagttccaagaagagcacgacagcgtcgtggct
cggctccacaaccagatccgccagctgcagcacgaccgggaggagttttacaaccagagc
caggaattgcagaccaagctggaggactgctgcaccataattgctgatttgcggctcgag
ttgaagaaagccaacaacaaggtgtgccacacggagctgctgttgagccaggtttctcaa
aagctctctaacagcgaatcggtccagcagcagatggagttcttgaacaggcaacttctg
gtccttggggaggtcaacgagctgtacttggagcagctacagcacaagcacgccgacaca
cccaaggaagtagaaataatgcaggtggccttccgaaaagacctggaaaaagccaagtgt
tacgttcagcagcagaaccagcagctggaggcttgtcagaaacggataactgaactggaa
tctcagctcaccaagagagaccatctcttattggagcagaagaaatacctggaggatgtt
aaagttcaagcccgaggccaactccaagcagtggagagtcggtacaaggtgcagaaaagg
atcacgcaggcgtttgagctggaaatcttagacctgtacggccggctggagaacgacaag
ttgcagaagaatcttgcagatgtcaaaatgggatctcctgaaatagtagatgaaagcagg
ctacccgaaagcaacacaggctccatcgcgggacacagcgaagagacgctcaacaggaac
ggtgagaccaaactgtccggcgctcgggggagcagcagcggcagcagcaagggtggcagt
gaagtctccactccggagaaaccccctaaccagagagccgggcagctgagccgctgggag
gcctccgtgctgctggactcctcccccggagggggtcccctgacagtgggctccctcccc
agctccgagagcttcctcgggatgaaggtgcgggagctgttccgcaacaagagcgagagc
cagtgcgacgaggatggggtgaccatcaatagcctttgtgacactttaaagatggagctg
tgcaaagaccccagcctggaggtcagggcgtcccctagcccagaggaccccgacccctcc
cctccgacccaggaaagcagtgttggacagcttcatataatggactacaacgaatcccat
catggccacagctaa
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