Sphaerodactylus townsendi (Townsend's least gecko): 125442036
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Entry
125442036 CDS
T08213
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125442036 (TIA1)
03041 Spliceosome [BR:
stow03041
]
125442036 (TIA1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125442036 (TIA1)
Spliceosome [BR:
stow03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125442036 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
125442036
NCBI-ProteinID:
XP_048369093
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Position
LG12:29787346..29812244
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AA seq
392 aa
AA seq
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MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKNTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMINPIQQQNQV
GYPPPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQGFSQTQSSAAWMGASYGVP
PPPPPPPPPPQGQNGSVLTSQTGYRMAGFETQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcccaagaccctgtatgtgggaaatctatcaagagatgttactgaa
gctctaatcctccagctgttcagccagattggaccatgcaaaaactgcaaaatgataatg
gatacggctggaaatgatccatattgttttgtggagttctatgagcatcgtcatgcagct
gcagctttagctgctatgaatggacggaagataatgggtaaggaagtcaaagtgaactgg
gcaacaacccccagcagccagaagaaagataccagcagtagtaccgttgtcaacacactg
cgttcacaagaccacttccacgtctttgttggagacctcagcccagaaattacaactgaa
gatattaaagcagcttttgccccatttggaagaatatcggatgcacgagttgttaaagac
atggcaacaggaaaatctaaaggatatggctttgtttctttcttcaataaatgggatgcc
gaaaacgctattcagcagatgggtggacagtggcttggtggaagacaaataaggactaac
tgggcaacacgcaaacctccagctccaaagaatacatatgagtcaaatgccaaacagctt
tcctacgatgatgttgtaaatcagtccagtccaagcaattgcacggtgtactgtggtggt
gttacttcagggctaacagagcaactgatgcgccagacgttttctccgttcggacagata
atggaaattagggtcttcccagataaagggtactcttttgtgcggttcaattcccatgaa
agtgctgctcatgcaattgtttcagtcaatggcacaaccatagaagggcatgttgtgaaa
tgttattggggaaaagaaacaccagatatgattaatccaatccagcagcaaaatcaagtg
ggatatccacccccttatgggcagtggggccaatggtatggaaatgcgcaacagattggt
cagtacatgcctaatggatggcaagtccctgcatacggaatgtatggacaagcatggaat
cagggatttagtcagacacagtcttctgcagcatggatgggtgcaagctatggcgtacca
ccacctccaccaccccctccaccccctccccaaggacagaatggaagtgttttaactagt
caaactggatatcggatggcaggttttgaaacgcagtga
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