Sphaerodactylus townsendi (Townsend's least gecko): 125442064
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Entry
125442064 CDS
T08213
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125442064 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125442064 (POLB)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125442064 (POLB)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
125442064 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
125442064 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
NTP_transf_2
Cdd1
HHH_2
Motif
Other DBs
NCBI-GeneID:
125442064
NCBI-ProteinID:
XP_048369143
LinkDB
All DBs
Position
LG12:33302682..33313953
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AA seq
335 aa
AA seq
DB search
MSKRKAPQENPNEGITDFLTELANYERNVNRAIHKYNAYRKAASVISKYPSKIKSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSSSINFLTRVTGIGPAAARKFVDEGIK
TLEDLKKNEHKLNHHQRIGLKYFEDFEKRIPREEMLKMQEIVLNEVKKVDPKYIATVCGS
FRRGAESSGDMDILLTHPDFTSESSKQPKLLHQVVAQLENISFITDTLSKGDTKYMGVCR
LPSKDEEANISFRRLDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTLNEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaggcgccgcaggagaaccccaacgagggtatcacggatttcctgact
gaactggccaactatgagaggaatgtgaatagagccatccacaagtacaatgcttacagg
aaagcagcttctgtaatatcaaaatatccaagcaagataaaaagtggggctgaagcaaag
aaactggatggagtaggagcgaaaattgcagaaaaaattgatgagtttttgtctactggt
aaactacgtaagctagaaaagattagacaagatgatacaagctcttctatcaacttcctg
accagagttactggcataggtcctgctgctgccaggaagtttgttgatgaaggaattaag
actctagaagatctcaagaagaatgagcataaattaaaccaccatcaacgaattgggttg
aagtattttgaagattttgagaaaagaatccctagggaagagatgttaaagatgcaggaa
atcgtgttgaatgaggtcaagaaagtggatcccaaatacatcgctacagtttgcggcagt
ttccgccgaggtgctgaatccagtggggatatggatatcctcctgacccatccagacttc
acttctgaatcctccaagcagccaaagcttttgcatcaagtggtggcgcagctggaaaac
atcagtttcattacggatacgctgtcgaagggagacaccaaatacatgggagtgtgtcga
cttccaagcaaagatgaagaggccaatatctctttcaggagacttgatatcaggttgatt
cctaaggatcagtattactgtggagtcctgtacttcactggaagtgacatatttaataag
aacatgcgggcccatgcactggaaatgggcttcaccctcaatgaatacacaatccggccc
ttgggagttacaggggttgctggagagccactcccagtggacagtgaaaaggacatcttt
gattacatccagtggaaataccgagagccgaaggataggagtgaatag
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integrated database retrieval system
