Sphaerodactylus townsendi (Townsend's least gecko): 125442244
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Entry
125442244 CDS
T08213
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stow03009
]
125442244 (DDX56)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125442244 (DDX56)
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
Pre-60S particles
Helicases
125442244 (DDX56)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
AAA_22
Motif
Other DBs
NCBI-GeneID:
125442244
NCBI-ProteinID:
XP_048369449
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Position
LG12:30679514..30688478
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AA seq
552 aa
AA seq
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MAEAEASFAHMGLDARLLQAIADLGWGKPTTVQEAAIPLALEGKDLLCRAKTGSGKTGAY
ALPLLQGLLNAKMGPSVSAQVVRVLVLVPTRELGRQVVSMLRQLASHCARHVRFVDVSGS
EDMSAQRPILMEKPDVVVGTPSRVLAHLQAHNLSLQDSLELLVLDEADLLFSFGFEDDLK
RLLCHLPKIYQTFLMSATFNEDVQALKELVLHNPVTLKLQESQLPDSSQLSQYQIRCETE
EDKFLLLYALLKLSLVRGKVILFVSTIDRCYRLKLFLEQFSIPACVLNSELPVQSRCHII
TQFNKGFYDYIVATDEQHLAEPEVLQQGKKKKGSKAAKIKGQESGVARGIDFQNVSAVIN
FDFPPSVESYIHRAGRTARASNPGTALTFVSCSESAQLAKIEAALVGEGNAVTLQPYQFQ
MEEIEGLRYRCRDAMRSVTKQAIKEARLQEIKEELLNSEKLKTYFEDNPRDLNLLRHDQP
LHPAIVKPHLRNMPEYLVPSSLRAVVRPFIGKQKYRRRKPLPSHTKGQQNPLRSFRYTKR
KLQNPAKRKKTS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccgaggcgagtttcgcccacatggggctggatgcgcggctcttacaggcg
atagcagacctgggttggggtaagcccacgacggtgcaggaggctgccatcccgctggcc
ctggaaggcaaagacttgctgtgccgcgccaagacgggctccggcaagacgggggcctac
gctttgccccttctgcagggtctgttgaacgccaaaatgggcccctcggtgtctgcgcag
gtggtgcgcgtgttggtcctggtgccaacccgtgagctaggccggcaagtagtcagcatg
ctgcgccaactggcctcgcactgtgcccgccacgtgcgcttcgttgacgtctcgggctcg
gaggacatgtctgcccagaggcccatcttaatggagaagccagatgtggttgtgggcaca
ccttcccgggtcctggcccatctgcaagcacacaacttgagcctgcaggactccctggaa
ctgctggtgctggatgaggcagacctgcttttttcctttggctttgaggatgacctgaaa
aggctgctctgccatttgcctaagatctaccagaccttcctcatgtcagccaccttcaac
gaggacgtacaagcgctgaaggaactggtgctgcataatcctgtgaccctcaagttgcag
gagtctcagctgccagacagctcccagctcagccagtaccagattcggtgtgagacggag
gaggacaagttcctgttgctctatgcacttctgaagctttcactggtgcgggggaaagtc
attctttttgtaagcaccattgaccgctgctaccgcctcaagctcttcctggagcagttc
agcatccctgcctgcgtgctaaactcagagttacctgttcagtctaggtgtcatatcatc
actcagttcaataagggcttctatgactacattgttgccacagatgagcagcacctggca
gaaccagaggtactgcagcaaggaaagaagaaaaagggcagcaaagcagcaaaaatcaaa
ggccaagaatctggcgttgcacgtggcattgacttccagaatgtgtctgctgtcatcaac
tttgacttcccaccttcagttgagtcctacatccaccgagcaggcagaacagctcgtgcc
agcaatcctggaacagcattaacttttgtgtcctgttcagagagtgcccagctggccaag
attgaggctgcacttgtgggagagggcaacgcagttaccttacaaccgtaccagttccag
atggaagaaattgaaggcctccgatatcgctgtcgggatgccatgcgttcagtcaccaag
caggcaatcaaagaggctcggctccaggagattaaggaggaactgctcaactctgagaaa
ctgaagacatactttgaagacaacccccgggatctgaatctactgcgccatgaccagccc
cttcacccagccattgttaagccacacctgcgcaatatgccagaatatttagtgccctct
agtctacgagctgttgtacggcctttcatcggcaagcagaagtacaggcggcggaagcca
cttccatctcatactaagggccagcagaacccactgcgcagcttcaggtacacaaagcgg
aaattgcagaatccagccaagagaaagaaaacctcctga
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