Sphaerodactylus townsendi (Townsend's least gecko): 125442359
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Entry
125442359 CDS
T08213
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04136
Autophagy - other
stow04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125442359 (ATG4A)
04136 Autophagy - other
125442359 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stow01002
]
125442359 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125442359 (ATG4A)
03029 Mitochondrial biogenesis [BR:
stow03029
]
125442359 (ATG4A)
Peptidases and inhibitors [BR:
stow01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
125442359 (ATG4A)
Membrane trafficking [BR:
stow04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125442359 (ATG4A)
Mitochondrial biogenesis [BR:
stow03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125442359 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
125442359
NCBI-ProteinID:
XP_048369609
LinkDB
All DBs
Position
LG13:complement(5495786..5521214)
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AA seq
374 aa
AA seq
DB search
MESEYLEELPETDEPAWILGRQHHLRNDKSKLLSDISGRLWFTYRRKFSPIGGTGPSSDA
GWGCMLRCGQMMLAQALICRHLGRDWLWEKHGKQPEEYHRILHCFLDRKDCCYSIHQMAQ
MGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCWFPSQSC
PGAHCSSLLPKNVLGRSKSPGDFCCSWKPLLLIVPLRLGINHINPVYVDAFKECFKMPQS
LGALGGKPNNAYYFIGFLGNELMYLDPHTTQLFVDSEENSAVHDRMKILNLDPSVALGFF
CKEEKDFDNWCSLVQKEIHKQQSLRMFELVQKHPPHWPPFVPPTKPEVTTTGAELIESTD
KLFELEEEFEILSV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgagtatctagaagagcttccagaaactgatgagccagcgtggatcttggga
aggcagcaccaccttagaaatgataaatctaaattgctgtctgatataagtggtcgcctt
tggtttacctacagaagaaagttttcaccaattggtggcacgggcccgtcctctgatgcc
ggctggggctgcatgctgcgatgtggacagatgatgcttgcccaagctctgatctgccgg
cacttggggcgggattggctgtgggagaaacatggaaagcaacccgaagaatatcacagg
atcttgcactgtttcctggaccgaaaagactgttgttattccatccaccaaatggcacag
atgggtgttggcgaagggaagtccattggagaatggtttggaccaaacactgtggcccag
gtgttgaagaaacttgcgctgtttgatgaatggaattccttggctgtttacgtgtctatg
gacaacacggtggtgattgaagacattaagaagatgtgctggttcccttcgcagagctgt
cctggcgcccactgcagttcgctgttgcccaagaatgtgctcggccgaagcaagagtcca
ggagatttctgctgcagctggaagcccctgttgctgatcgtacctcttcgtttggggata
aaccacatcaatccggtttatgtggatgcttttaaggagtgttttaagatgccgcagtcc
ttgggagctttaggaggaaaaccaaacaatgcctactactttataggatttttaggaaac
gagttgatgtatttggatcctcacaccacccagctttttgtagactccgaagaaaactcc
gccgtacatgatcggatgaagatcctgaatctggatccctctgtcgccttgggctttttt
tgtaaggaagaaaaagactttgataactggtgtagccttgtgcaaaaggagatccataag
caacagagtctgcgtatgtttgagctggttcagaagcaccccccacactggcctcctttt
gtacctcctacaaaaccagaagtgacaacaactggagcagagctcattgagtccacggat
aagctctttgaactggaagaagagtttgagattctgagtgtctga
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