Sphaerodactylus townsendi (Townsend's least gecko): 125442698
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Entry
125442698 CDS
T08213
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03030
DNA replication
stow03410
Base excision repair
stow03420
Nucleotide excision repair
stow03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125442698 (RFC5)
03410 Base excision repair
125442698 (RFC5)
03420 Nucleotide excision repair
125442698 (RFC5)
03430 Mismatch repair
125442698 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stow03032
]
125442698 (RFC5)
03036 Chromosome and associated proteins [BR:
stow03036
]
125442698 (RFC5)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125442698 (RFC5)
DNA replication proteins [BR:
stow03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125442698 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
125442698 (RFC5)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125442698 (RFC5)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125442698 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
125442698 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_24
AAA_assoc_2
AAA_16
AAA_11
AAA_22
AAA_14
RuvB_N
DEAD
ResIII
DUF815
AAA_5
AAA_19
nSTAND3
AAA_30
ATPase_2
TniB
PhoH
bpMoxR
AAA_7
TIP49
AAA_25
DNAX_ATPase_lid
Thioredoxin_6
Mg_chelatase
AraA_central
AAA_28
Glyco_hydro_57
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125442698
NCBI-ProteinID:
XP_048370245
LinkDB
All DBs
Position
LG13:42656605..42670994
Genome browser
AA seq
338 aa
AA seq
DB search
MERAATSGTTVAARAPNLPWVEKYRPQTLGDLISHQDILSTIQKFISEDRLPHLLLYGPP
GTGKTSTILACAKQLYKGKEFGSMVLELNASDDRGIDIVRGPILNFASTRTIFKKGFKLV
ILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKVIPALQSRCTRFRFGPLTPDLM
VPRLQHVTEEEKVDISDDGMKALVTLSNGDMRRALNILQSTNMAFGKVTEETVYTCTGQP
LKTDIANILDWMLNQDFTTAYRNIMELKTLKGLALQDILTEIHLFVHRVDFPSSVRIQLL
IKMADVEHRLAAGTSEKIQLGALVAAFQVTRDLIVAEA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcggcgacttcgggaacgacggtggccgcgagggccccgaacttgccttgg
gtggaaaaataccgacctcagactctgggagatctgatttctcatcaggatattctgagt
accattcagaaattcatcagtgaagaccggttgcctcatcttcttctctatgggcctcca
gggacaggaaagacctctactattttggcctgtgcgaaacaactttacaaaggcaaagaa
ttcgggtcgatggttctggaactgaatgcttcagacgaccggggtattgatattgtcaga
ggacctatcctgaattttgccagcacaaggactatctttaagaaaggctttaagctggtg
attttggatgaagccgatgccatgacacaggatgctcagaatgccttgaggcgtgtgatt
gaaaaattcacggagaacacacggttttgcctgatctgcaactacctctccaaggtaatc
ccagctttgcaatccagatgcacaagattccgctttgggcccctgacgccggacctgatg
gttccccgcctgcagcatgttacagaggaggaaaaagttgacataagcgatgatggaatg
aaggccctggtgacactgtctaacggggatatgcgcagggctctgaacatcttacagagc
actaacatggccttcgggaaagtaactgaggagactgtctacacctgcacggggcagcct
ctcaagactgacattgccaacatcttggactggatgctgaaccaagatttcaccaccgcc
tatcgcaatatcatggagctgaaaacgctgaaaggcctggctcttcaagacatcctgact
gagattcacttgttcgtgcatcgagttgacttcccatcatctgtacggatccaactcctg
atcaagatggcggatgtcgagcatcgtctggctgcagggacaagtgagaagattcagctg
ggagccctggttgctgccttccaagtcaccagagatctgatcgtagctgaggcctag
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integrated database retrieval system
