KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125442708
Entry
125442708         CDS       T08213                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125442708 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stow03041]
    125442708 (SF3A1)
Spliceosome [BR:stow03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125442708 (SF3A1)
 Complex B
    125442708 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    125442708 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 125442708
NCBI-ProteinID: XP_048370268
LinkDB
Position
LG13:37654286..37671713
AA seq 799 aa
MPAGPVQAMAPAQPAPPEAKQPEDEPKEEATPAKPVVGIIYPPPEVRNIVDKTASFVARN
GPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAIPKVMQQQQSA
QQQLPQKVQAQVIQETVIPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQ
LMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLIIKLKKEAENPKEVLDQAC
YRVEWAKFQERERKKEEEEKERERVAYAQIDWHDFVVVETVDFQPSEQGNFPPPTTPEEL
GARILIQERYEKFGESEEVEMEVESDDEDEKQEKTEETPSQLDQDTQVQDMDEGSDDEDE
NQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASK
MQEHMRIGLLDPRWLEQRDRSLREKQTDDEVYAPGLDIESSLKQLAERRTDIFGVEETAI
GKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEK
IGPSKPNEMPQPMPPSSVPNMPTNAPPIASVPRPPSMLPPVRTTVVSAVPVMPRPPMTSV
VRLPPGSVIAAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTGYRQGPVSSPAFVP
APPVAPVAAPSPMPPVHPPPPMEDEPSSKKLKSEDSLMPEEEFLRRNKGPVTVKVQVPNM
QDKTEWKLNGQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYN
MTSGSVIHLALKERGGRKK
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgccggccgggcctgtgcaggcgatggcgcctgcccagccagcgccacctgaagcgaag
cagcctgaggatgagccgaaggaagaagcaacgccagccaaacctgttgtgggaattatt
tacccaccgccagaggttagaaatattgtggacaagacagctagctttgtggccagaaac
ggtccagaatttgaagctcgaatccgtcagaatgagatcaataacccaaaattcaatttc
ttgaatcccaacgatccttaccatgcctactaccggcacaaagtcaatgagttcaaggaa
gggaaggcccaggagccctctgcggctattccaaaggtcatgcagcagcaacagagtgct
cagcaacaacttccccaaaaggtgcaggcccaggtgattcaggaaactgtcattccaaag
gagccccctccagagtttgagttcattgcagaccccccctcaatctctgcctttgacttg
gatgtggtaaagctgacagcacagtttgttgctcgcaatggtaggcagtttctcacccag
ctgatgcagaaggagcagaggaactaccagtttgactttttgcgcccacagcacagcctc
ttcaactacttcaccaaactggtggaacagtacacaaagatcttaatccctcccaagggc
ttaatcataaaactcaagaaggaagcagaaaaccccaaggaagtattggaccaggcatgc
tacagagtggagtgggccaagtttcaggagcgagagcggaagaaggaagaagaagagaag
gagagagagcgtgttgcatatgcccagattgactggcatgactttgtggtagtggaaact
gtggacttccagccctctgagcaagggaacttcccgccccccaccacacctgaggagctg
ggagctcgcattctgatccaggagcgctacgagaagtttggcgaaagcgaggaagtggag
atggaggtagagtcagatgatgaagatgagaaacaagagaagacagaggagactccatct
cagttagaccaggacactcaagtgcaggacatggatgaaggctctgatgacgaagatgag
aaccagaaagttccaccacctccagaaactccaatgccaccaccacttcccccaactcca
gatcaggttattgtcaggaaagattatgatccgaaagcttccaagcctttgccacctgcc
ccagcccctgatgagtatctggtttcccccatcactggggagaagattcctgccagcaaa
atgcaggaacacatgcgaattgggctcctggatcctcgctggctggagcaaagagaccgt
tccctccgggagaagcagactgatgacgaagtttacgccccaggcttggatatcgaaagc
agtctgaaacagttggctgagcgccgtactgatatttttggtgtggaagagactgctatt
ggcaagaagattggggaagaggagatccagaagccagaagaaaaggtgacctgggacggc
cattctggcagcatggcccgaactcagcaggctgcccaagccaacattaccctgcaggaa
cagattgaagctatccataaggccaaggggctggtgcctgaagatgacagcaaggagaag
atcggtcccagcaaacccaacgagatgccccagcctatgcccccttcatcagttccgaac
atgccaacgaacgctccgccaattgcgtctgtgccccgcccgccctcaatgctgcctcct
gtccgtacaactgttgttagtgctgtccctgtcatgcctcgtcctcctatgacttcagtg
gtgcgtttaccaccaggctccgtcatcgctgctcccatgccaccaataatacacgcacct
cggatcaatgttgttccaatgccaccttctgccccgcctattatggctccacgtccccct
ccaatgattgtgccaacaggatacagacagggaccagtcagcagtccagcatttgttccc
gcccctcctgttgcaccggttgctgccccgtcgcctatgcctcctgttcaccctcccccg
cccatggaggatgagccgtcttctaagaagctgaagtctgaagacagcctcatgccagag
gaggagtttctgcgcagaaacaagggcccagtcacagtcaaagtccaggttcccaacatg
caggataagactgaatggaagctgaatggccaggtgctggtgttcaccctgccgctctct
gatcaggtttctgttataaaggtgaagatccatgaagctaccgggatgccagctgggaaa
cagaagcttcagtatgagggcatcttcatcaaggactccaattctctggcttactacaac
atgacaagtgggtctgtgatccacttagcactcaaagaaagaggaggcagaaagaagtag

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