Sphaerodactylus townsendi (Townsend's least gecko): 125442896
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Entry
125442896 CDS
T08213
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125442896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125442896
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125442896
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
125442896
NCBI-ProteinID:
XP_048370627
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Position
LG13:915582..960747
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AA seq
561 aa
AA seq
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MAMATELEPAAGPAGAPLDADDDDEEHWLYGGYSVLRQAENAYGIFYLLSLEQVSSCIPD
DSGKQEDGPIPGHSESHTLQDVAQESRIVNCEDRELLQQALPSGEDDEEDSESDSDDDDI
RVTIGNIKTGAPSYIIFPLQPVTVQTTLLPPPPIRLKLRLQPLPPPHFSCLFPGADLSDY
FNYGFNEETWKAYCEKQRRLQLGLEPSAPVNTENKITVQQGRIGNAEKEPENNIVKMDFK
TDFVALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHG
SKSQPPQQPQQPSQPQQPPQQQPFAPPTGPPPPIGGPPPPPHFLHPPPPPVTSVPPPLHP
PGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPASYSNRQGPPFGYSSADSGFISYPPIST
SHAPWVTTVDKASSASDGGHWEYSGSRRERERDRARTPTASEYNNDDERYRYYSRERSYD
FERDYRRSRERSREREDRHRERRHRDKEEGGKHKSSRRKQHEGEEGESHRRHKHRKNKRS
KEEKEASEDGVPEGNEQDSKE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccaccgagctggagcccgccgccgggccggcaggagcgccgctggacgcc
gacgacgacgacgaggagcactggctgtacggaggatatagtgtgctgagacaagcagag
aatgcttatgggatattttaccttttgagtttggaacaagtgtccagttgtattccagat
gatagtggtaagcaagaagatggaccgatccctggacactccgaatcacatactttacaa
gatgttgcccaggagagcaggattgtcaactgtgaagaccgagagctgttgcagcaggct
cttcccagtggcgaagatgacgaggaagacagcgagagtgatagtgacgacgatgacatc
cgagtcaccatcggtaacatcaaaactggcgccccatcttacatcatttttcctctgcaa
cctgtaacagtacagaccacgctgctgcctcccccacccattcgtctgaagctccggctc
cagccacttccccctcctcacttttcctgccttttcccaggtgctgacctctctgactat
ttcaactacgggttcaacgaggaaacgtggaaagcttactgcgaaaagcagcgtcggctt
cagctcggcctggagccctcggcccccgtcaacaccgagaataaaatcacggttcagcaa
ggaaggataggaaatgcagaaaaagaaccggagaacaatatcgtcaaaatggattttaag
acggattttgtggcccttgtcggtgggcggatgaaagctgggcctccccctaacaggaag
ctgggtgggaccatcgatgtgattggcgggcaggcaggcaccatccgaagggtggaagga
aggcgccgcgacaagcatgcctctgaggagaaccccattcaggttcttggggatcatggg
agcaaatcgcagcccccgcaacagcctcagcagccatcgcagcctcaacagcctcctcaa
caacagccgtttgcgccaccgacggggcctccgccgcccatagggggccctcctcctcct
ccgcactttctccatccgcctccgcctccggttacctctgtcccgccccctctccatccg
ccaggtcttccaccacccggccccattccagggctgttccctccacctcttgctccaccg
cctgctctcctcatcccgacgttagatggccagcctgccagctacagcaaccgacaggga
cccccatttggctacagctccgcagattcaggtttcatcagctacccacctatttccacg
tctcatgcgccctgggtgaccaccgtggacaaggcctccagcgcttctgacggtggtcac
tgggagtactctggttcaaggagggagagggaaagagatcgtgcccggacccccaccgcc
agtgaatacaacaatgatgatgaacggtatcgttactacagccgggagcgcagttacgat
tttgagcgggactaccgcaggagccgggagcgcagccgggagcgggaagatcgccatcgg
gagcgaaggcaccgggacaaagaggagggcggcaaacacaagtcctcccgccggaaacag
cacgagggcgaggaaggggagagccatcggcgccacaagcacagaaagaacaagcgcagc
aaggaagagaaggaggccagcgaggacggagttcccgaggggaatgagcaggactccaag
gagtag
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