Sphaerodactylus townsendi (Townsend's least gecko): 125442973
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Entry
125442973 CDS
T08213
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125442973 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
125442973 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125442973 (THOC2)
03041 Spliceosome [BR:
stow03041
]
125442973 (THOC2)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125442973 (THOC2)
Spliceosome [BR:
stow03041
]
Complex C
Other components
EJC/TREX
125442973 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125442973 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
125442973
NCBI-ProteinID:
XP_048370754
LinkDB
All DBs
Position
LG13:21489910..21544630
Genome browser
AA seq
1618 aa
AA seq
DB search
MAAATVAAALPDEWIKNWEKSGKSEFLQLCRSLAENKSHDNVTVRRFSSGKMRNEMDSLK
CIQQALYELAYHVVKGNLKHDQASNVLSDVIEFRDDMPSILADVFCILDIETSCLEEKNK
RDQFMQLVLACLYLVSDTILKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFN
LLREENEGYAKLIAELGQDLSGNITSELILENIKSLIGCFNLDPNRVLDIILEVYECRPE
YDEFFVPLIESYMYMCEPQTLCHILGFKFKFYQEPNGETPVSLYRVAAVLLQHNLIDLED
LYVHLLPSDNTILEEHKREIGEAKQIVRKLTMVILSSEKTEEKEKEKEKEEEKTEKPPDN
QKLGLLEAMLKIGDWQHAQSIMDQMPPFYATSHKPIAVALCRLLHVMIEPLYRRVGVPKG
AKGIPIPPLQNKRAPKQVESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKSFMKEY
QSDGSKQDDKEKMELLFSCLLSITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQHRYRL
YGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYI
LSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLA
SFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTTEQLEAM
TGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHL
KLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYA
HHISSKYDELKKAEKGNKQQQKVNKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYAT
FWSLTMYDLAVPQSSYEREVTKLKVQMKAIDDNPEMPLNKKKKEKERCTALQDKLLEEEK
KQSEHVQRVLQRLKLEKENWLLAKSTKNETITKFLQLCIFPRCIFSAIDAIYCARFVELV
HQQKTQNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRTIYEKE
CGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNI
LIVLTKILPWYPKVVNLGQALERRVDKICKEEKEKRPDLYALAMGYSGQLRSRKHCMVPE
NDFHHKDPPTRNAVPTTVQNGPGGAALPPSLTVNAAKMEESTTEETDKLKEKSQGAVKVI
NKAASTMPKMTASNGNSASNSKVIKEKEDKEKCGKEKDKEKKEKTPAATPEAKALGKDGK
EKPKEERTNKEDKARDTKEKTPKSDKEKEKAKREEKSSKDEKSKIIVTNAESKSTAEKER
EKEPSREREVSKDMKAKENIRGGGGGGEKVPVAGSLKSPVPRSEASDSEREQKRRKVDTH
SSPSHSSTVKDSLSELKDSSAKHYINHSAPTLSKSKEREVEKKDLDKSRERSREREKKDE
KERKERKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPLSNEKEKEKNKSK
SSSKEKGDSIKVDKTEKSSSASKKESRHDKEKTEKKDKRDSTGGKEEKKHHKSSDKHR
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgacggtggcggcggcgctccccgacgagtggatcaagaactgggagaaa
tcgggcaaaagcgagtttttgcagttatgtcgttctcttgctgaaaataaaagccatgat
aacgtgactgtgagaagattttcatctgggaaaatgcggaatgagatggactctcttaaa
tgtattcagcaggcactgtatgagcttgcttaccatgttgtgaagggaaacctaaagcat
gatcaagcatcaaatgtactcagcgatgttatagaatttcgggatgacatgccctccatc
ctagctgatgtattctgcatattagatattgaaactagttgtttagaagaaaagaataag
agagatcagtttatgcagctggtgttagcatgtttgtatttagtttcagacactatacta
aaagagcggctggacccagaaacattagagtcgttagggcttatcaagcagtctcaacag
ttcaatcagaagtctgtgaaaatcaagacaaaacttttttataagcaacagaaattcaat
ttattaagagaagagaatgaaggttatgcgaagctgatcgctgaattgggacaagattta
tctggaaatatcactagtgaattgatcctagaaaatatcaaatcgttaataggatgtttt
aacctggatcctaacagagtgttggatattatcttagaagtctatgaatgcaggccagaa
tatgatgaattctttgtacctttgatagaatcttacatgtatatgtgtgaacctcaaaca
ctctgtcatatccttggattcaaattcaaattctatcaggagccaaatggagagactcct
gtctctttatacagagttgctgcagttcttttgcaacataatctaatagatttggaagat
ctttatgttcatcttcttccaagtgacaatactatccttgaagaacacaaacgagaaatt
ggagaagcaaagcaaattgtgaggaaacttacaatggttatactatcttctgaaaagact
gaggagaaggaaaaagaaaaagagaaggaagaagagaagacagaaaagccacctgataac
cagaaactgggtttattagaagcaatgttaaaaatcggtgattggcagcacgcccagagc
attatggatcaaatgcctccattttatgcaacgtcacacaagcctatcgctgtcgccctt
tgtcggcttcttcatgtgatgattgaacctctctataggagagttggagtacccaaaggt
gctaaaggcataccaatcccccctttgcaaaacaagagagcgccgaaacaagtagaaagc
tttgaagatttaaggaaggaagtgttcaacatgctttgttacctcgggcctcatctctct
catgatcccattttatttgcaaaggtggttcgtcttggcaaatcttttatgaaagagtac
caatctgatggaagcaagcaagacgataaggagaaaatggaactattattcagctgtttg
ctgagtattacagatcaggttttactcccttctcttaccttgatggactgcaatgcgtgt
atgtcagaagaactttggggaatgtttaaaacatttccgtaccagcaccggtaccgtctc
tatggccagtggaagaatgaaacgtataatagtcacccgctgctagtgaaagttaaagct
cagacaattgacagagccaaatatattatgaagcgtctaaccaaggaaaatgtaaagcct
tctggaagacaaattgggaaactgagccacagcaatccaactattttgtttgattatatt
ttgtctcagatacagaagtatgataatttaataacgccagttgttgattcattgaaatac
ctcacttcgctgaattacgacgtcttggcatattgcattattgaagcactggccaatcct
gaaaaggagaggatgaagcacgatgacactacaatctccagctggctacaaagcctagct
agcttctgtggtgcagtttttcgaaaataccctatcgaacttgctggcctactccagtat
gtggcaaatcaactaaaggcggggaaaagttttgacctacttattttgaaagaggtagta
caaaaaatggctgggatagaaattactgaagagatgaccacggagcagctagaagccatg
actgggggagagcagctcaaagccgagggtggatattttggccagatcagaaacactaaa
aaatcttctcagagattaaaagatgcacttttggatcatgatcttgcccttccactgtgc
cttctcatggctcagcagcgaaatggtgtgatctttcaagaaggaggagagaaacatttg
aagctcgtgggaaaactgtacgaccagtgtcatgacactctggtgcagtttggtggattt
ttagcgtccaacttaagcacagaggattatattaagagagtgccttctatcgatgttctc
tgtaatgagtttcatacacctcacgatgctgcatttttcctttcaaggcctatgtatgca
caccacatttcatcaaaatacgatgaactgaaaaaagccgaaaaagggaacaagcagcag
caaaaagttaacaaatatattacgtcatgtgaacttgtgatggctccggttcatgatgca
gtaatctccttgcaccttcccaaagtttgggatgacatcagtccacagttttacgccacg
ttctggtcactaacaatgtatgacctcgctgtgcctcagagcagctatgagagggaagtc
accaaactcaaagtccagatgaaggcaatagatgacaatccggaaatgcctttgaataaa
aagaaaaaagaaaaagaacgctgcacggcccttcaggataagctgcttgaagaagagaag
aaacaatctgagcatgtgcaaagggtgctgcagaggctgaagttagaaaaggagaattgg
cttcttgcaaaatctaccaaaaacgagaccataacgaaatttctacagttgtgtatattt
cctcgctgcattttctctgccattgatgccatctactgtgcccgctttgtggaactagtt
catcaacagaaaacacaaaatttttccacgcttctttgttatgatagagtattctctgat
ataatctatacagtagcaagctgtactgaaaatgaagctagtcgctacggaaggtttctg
tgctgtatgctagaaactgtaacacggtggcatagtgataggaccatatatgaaaaggaa
tgtggtaactatccaggtttcctcactatattacgggcaactggttttgatggtgggaac
aaagctgaccaattagattatgaaaattttcgacatgtggtacacaagtggcattataag
ttaaccaaggcttccgtgcactgccttgaaacgggggagtatacacacatcagaaatatc
ctgattgtcttgaccaaaatcttgccatggtatcccaaagttgtgaatctgggccaggcc
ttggaaagaagagtcgacaaaatctgtaaagaggagaaagagaagagacccgatctctat
gcattagctatgggctattctggacagttgagaagtagaaaacattgcatggtccctgaa
aatgatttccaccacaaggacccacccaccaggaatgcagtacctacaacagtgcagaat
gggccaggtggagctgcgctgcctccttcgctgacagtaaatgcagctaaaatggaagaa
agcactactgaggagactgataaattaaaggagaaatctcagggtgctgtgaaagtaatt
aacaaagctgccagtacaatgccaaaaatgactgcaagcaatgggaacagtgcttctaac
agcaaagttattaaagaaaaagaagacaaagagaaatgtgggaaggaaaaagacaaggag
aaaaaagagaagactccagctgccactcctgaggccaaagcacttggaaaagatgggaaa
gaaaaaccaaaggaagagcggacaaacaaagaagataaagccagagataccaaggagaag
actcccaagtcagataaagagaaggaaaaggccaagagagaagagaaatcctccaaggat
gaaaaatccaagataattgttaccaacgctgagtcaaaatcaacagcagaaaaggagaga
gagaaggaaccatccagagagagagaggtctctaaggatatgaaagccaaggaaaatatt
agaggaggaggaggaggaggagagaaggtgcctgttgctgggtccttgaagtcacctgtt
ccccgatcagaagcatcagattctgaaagggaacaaaaacgccgcaaagttgatacccat
tcttctccatcgcattcctcaactgtaaaggacagcctcagcgaacttaaggactcctca
gcaaagcactacattaaccactcagctccaacactgtccaagagtaaagagagagaagtg
gaaaagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaagatgag
aaggagaggaaagaacggaaacgggatcattcaaatagtgaccgagaagtcccccaggat
tcaaccaaaaggcggaaggaggaaaatggaacaactggttcctccaagcacagcaagagc
gaaagtccctctgattcacctctctcaaatgagaaggagaaggagaaaaacaaatcgaaa
tcttcaagcaaagaaaaaggagactccatcaaagtggataaaacagagaaaagctcatct
gctagcaaaaaggaatccagacatgataaggagaaaacagagaaaaaagataaacgggac
agcactggcggcaaagaagaaaagaaacatcataaatcgtcagacaagcacagataa
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integrated database retrieval system
