Sphaerodactylus townsendi (Townsend's least gecko): 125442984
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Entry
125442984 CDS
T08213
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03030
DNA replication
stow03410
Base excision repair
stow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125442984 (POLE)
03410 Base excision repair
125442984 (POLE)
03420 Nucleotide excision repair
125442984 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stow03032
]
125442984 (POLE)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125442984 (POLE)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125442984 (POLE)
DNA replication proteins [BR:
stow03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
125442984 (POLE)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
125442984 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
NAD_binding_9
APP_N
Motif
Other DBs
NCBI-GeneID:
125442984
NCBI-ProteinID:
XP_048370765
LinkDB
All DBs
Position
LG13:36798827..36852832
Genome browser
AA seq
2285 aa
AA seq
DB search
MAQRKGGWRRRQGEAPREDADEETPRDDGSSLSALRRLERSQWTDKIDGQFGFERMKEPA
ERTGWLINMHPTEILDEDKRLVSAVDYYFIQEDGSRFKVALPYRPYFYIATRKGCDREVS
SFLSKKFQGKIAKLDTVPREDLDLPNHLVGLKRNYIKLSFNTVDDLIKVRREISPAVKKN
QEQDVATDTYTTMLASALTGSKLANEKEGPSKKTTDQMDNIVDMREYDVPYHIRLSIDLK
IHVAHWYNIRYRGSSFPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMIS
YMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPT
IMVTYNGDFFDWPFVETRAAVHGMNMKQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYL
PVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPF
IFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTNDGHVLDSE
TYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEGVPLDQVTNFQ
EVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEVTCAACDFN
KPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPSLFPDGPPRAFHVLSREEQAK
YEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKK
KLAAAVEMGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCF
TGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVVKSTNAKKPKVTISYPGAML
NIMVKEGFTNDQYQELVDPASLTYVSRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYA
VFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVL
YSRAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCR
FIISKKPEGSPVTERAIPLAIFQAELSVRRHYLRKWLKSPSLQDFDIRTILDWDYYIERL
GSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVTA
NVPQDGTPCTQTADIEDFGIAKSLQPKIPLSSKRKRVPTAEESQFPSQNLELTQSWREIL
GPPPPTGTTKEEHLVWLRYHKKKWELQARQRLERRKRRRLADGEAVLGGGLIRDGPSRGL
NSYLRKTARSILDMPWQIAQIAETSQPGLFKLWALIGTDLHCLKLNIPRMFYVNQRIPKP
EEGPVYRKVNRTLPRLNPVCNLYEYSVPEDMYQEHINEINASLSAPDIEGVYETQVPLIM
RGLTRLGCVCMVNKHLVRHLTGRETETFDLEHLEMRSLAQFSYLEPGTIKHIYLYHNSQG
KKALFGLFIPFQRKASVFVVDTVRSNQMPNLTSMYSADHRVMVEKVGQELLPPEKHTFEV
RAETDLKTVYRAIQRLLLGYKDERRGPTLIAVQSNWDLKRLVLGMPVFEEFPLVPVQVID
DINYGVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPVGNLPDDISTFGTDLFFSR
HLHRHNHLLWLSPTSRPDLGGKEADDSRLVMEFDERVSVEINHPGCYSTVCVELDIQSLA
VNTILQSHHINDMEGASSMCISFDVVQQASLEDMVTGNQASTPASYDETALCSHTFRILK
SMVVGWVKEITQYHNVYADNQVIHFYRWLRSPTSLLYDPALHRTLHNLMKKLFLQLVAEF
KRLGSSVVYANFNRIILCTKKRRIEDALSYVEYITNSIHSKEIFHSLTISFSRCWEFLLW
MDPANYGGIKGKVPSSVHCGEKETGKKEASDEESSEGEEVEDEEGGAEEDGGEEQLENNW
NIMQYLPQTASCQNYFLMIVSAYIVAVYHSMKEEMRQNTPGNTPIKRRANSQISQEPRGE
PGAMPGVITFSQEYVANELTQSFFTITQKIQKKVSGSRRTTEPSEMFPALPGSYLMFNNP
ALEFIKCVCQVLSLDTNITNQVSKLKRDLLRLIEVGEFSEEAHFQDPCRSYVLPEVICRN
CNFCRDLDLCKDPALSQDGSILPNWVCSNCQAHYDSEGIEMALVEALQKKLMAFMLQDLV
CQKCKGIKDTHMPVYCSCAGDFDLLLPTKTFMEHLKIFQSIAQHYNMAFLLETIKWLLQM
NPHFL
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaggaagggcggctggcggcgccgccagggggaggcccccagggaagatgcc
gacgaagagacaccgcgtgatgacggctcctcactctctgccctgaggcgcttggagcgc
agccagtggacagacaagattgatggacagtttgggtttgaaaggatgaaggaacctgcc
gagagaacaggctggttgataaacatgcatccaacagaaattttggatgaagataagcgc
ttggtcagtgctgtggattattatttcatccaggaggatgggagcaggtttaaggtggca
ttaccctataggccatacttctatattgcaactcgaaagggttgtgaccgagaagtgtca
tccttcctttccaagaagttccaagggaaaatagcaaaacttgacactgtacccagagag
gatcttgacttgccaaatcatctggttggcctgaagcgaaactacatcaagctgtccttc
aatacagtggatgacctaataaaagtgcgtagagaaatctcacctgctgtgaagaagaac
caggaacaggatgtcgcaacagatacctacaccaccatgctagccagtgctttgactggg
agcaagctggccaatgaaaaggagggaccctctaagaagactacagaccagatggacaat
attgttgacatgcgggagtatgatgtcccctaccatatccgtctgtccatcgatctgaag
atccatgtggctcactggtacaacatccgctatcgtggcagcagctttcctcctgaaata
acccgccgagatgacctggtagagcgaccagatcctgttgttctagcttttgacattgag
acaactaaactccctttaaagtttcctgatgcagaaaccgaccagataatgatgatctcc
tacatgattgatggccagggttacctgatcacaaatagggagattgtttctgaggacatt
gaagactttgagtttactcccaaaccagagtatgagggtcccttctgtgtctttaatgaa
ccagatgaggcccatcttattcaacggtggttcgagcatgttcaagagaccaaacccacc
attatggtgacctacaatggagacttctttgactggccctttgtggaaaccagagcagcc
gttcatggaatgaacatgaagcaggagattggattccagaaggacagccaaggggaatac
aaagcttctcagtgcatccacatggattgtctcaggtgggtcaagagagacagttacctc
ccagtgggaagccacaacttgaaagcagcggccaaagcaaagctgggctatgaccctgtg
gagctggatcctgaagagatgtgccggatggctactgaagagcctcagactctggccacc
tactcagtgtctgatgctgttgctacctattacatgtacatgaagtacgtccaccctttc
atctttgccttgtgcaccatcattccaatggagcccgatgaggtgctgcgaaagggttcc
gggacactgtgtgaagctctgctcatggttcaggcatatcacgccaacatcatcttcccc
aacaagcaagagcaggagttcaacaagctcaccaatgacgggcatgtgctggactcggag
acatatgttgggggccacgtggaggcactggaatccggagtcttccgcagtgacatcccc
tgccgctttaagatgaatcctgctgcctttgacttccttctgcaacgtgttgaaaagaca
atgcgccatgccattgaggaagaagaaggcgtacctctagatcaggttaccaactttcag
gaggtttgtgatgaaatcaaagtcaagctgaattccctaaaggatgttcccaacaggatt
gagtgtcctctaatctaccatctggatgtgggagctatgtatcccaacatcatcctgacc
aacagactgcagccatcagctatggtagatgaggtcacatgtgctgcctgtgacttcaac
aagccaggtgctaattgtcagcggaggatgacctggcagtggagaggagaattcatgcca
gcaagccgcagcgagtaccaccggatccagcagcagctagagtcagagaagttcccttct
ctcttccctgatggaccaccccgggcattccatgtgctatctcgagaggagcaagccaaa
tatgaaaagaagcgcttagcagattactgccgcaaggcctacaagaaaatccatgtgacc
aaagtggaggagcgtgtcaccaccatctgccagcgggaaaactccttctatgtagacacc
gtgcgagctttcagggaccgtcgctatgagttcaaaggactacacaaggtgtggaagaag
aagctggctgcagctgtggagatgggtgacgcctctgaagtaaagcgctgcaagaatatg
gagatcttgtatgactccttacagctggcgcacaagtgcattctcaattccttttatggc
tatgtcatgcgcaaaggggctcggtggtactccatggagatggctggaattgtctgcttc
acaggtgcaaatatcatcacgcaagccagggagctaattgagcaaattgggagaccactg
gagctggacactgatggaatctggtgcgtccttccaaacagcttcccagaaaattttgtt
gtcaagtcaaccaatgccaagaagcccaaagtgacaatctcatatccaggcgcaatgttg
aacattatggtgaaggaagggtttacaaatgatcagtatcaggagttggtggacccagcc
tcactcacatacgttagtcgttcagagaacagcattttctttgaagtggatgggccgtat
ctggcaatgattctacctgcctccaaggaagagggcaagaagctgaagaaaagatacgct
gtgttcaatgaagatggctcccttgctgagctgaaagggttcgaagtaaagcgacgtggg
gagttgcagctggttaagatcttccagtcatccgtattcgaagcttttttgaagggcacc
acactggaagaggtctacgcatcggttgccaaagtggctgattattggcttgatgtcctt
tacagtagggctgccaacatgcctgactcagagctgtttgaactgatctctgaaaaccga
tccatgtcacggaaactggaggattatggggagcaaaaatccacctctatcagcacagct
aagcgcctggctgagttcctgggggaccagatggtgaaggatgcaggcctgagctgtcga
tttattatctctaagaaaccagaaggctcccctgtcactgagagggctatcccactagcc
attttccaggcagagctctcagtacgaaggcattatctccgaaaatggctcaagagtcct
tcattgcaggattttgacatccgaacaatcctagattgggactattacattgagagactg
ggcagcaccatccagaaaattatcactatccctgcagcgctgcagcaggtgaagaatcca
gttcctcgggtccgccatcctgattggctgcacaagaaactcttggagaagaatgatatc
tacaaacagaagaaaatcagtgagctgttcacaagtgagggcaagaggcaggtcactgcc
aacgttccacaggatggcactccatgcacacagactgctgacatagaagattttgggatt
gccaagtctttgcagccaaagattcccctgtcaagcaaacgcaaacgtgtccctacagct
gaggagagccagtttccatcccagaatctggagttaacccaatcctggagggagattctg
ggcccacccccacccactggcaccacaaaggaggagcacctagtctggctgcggtaccac
aagaagaagtgggagctccaggctcggcagcgcctcgaacgccgaaaaaggcggcggttg
gcagatggtgaggcagtcctgggtggggggctgatccgggatggcccctccagaggtcta
aacagctacttgcgcaagacagcacgcagcatcttggacatgccgtggcagattgcacag
attgctgagaccagccagccaggcctgttcaagctatgggctttgattgggaccgacttg
cactgccttaagctgaacatcccacgtatgttttatgtcaaccagcgcatccctaaacca
gaagagggcccagtctatcgaaaggtgaacagaactcttcctcgcttgaaccctgtctgc
aatttgtatgaatactctgtgcctgaggacatgtatcaggagcacatcaatgaaataaat
gccagtctctctgccccagacatagagggtgtatatgagacccaggtgccattaataatg
cgaggcttgactcgcctgggctgcgtgtgcatggtgaacaaacatctagttaggcatctt
actggccgggagactgagacctttgacctggagcacctggagatgcgctctctggcccag
ttcagctacctagagccaggaactatcaaacacatctatctatatcacaactcccaaggc
aagaaggcactttttggcctcttcatcccctttcaacgcaaagcgtctgtcttcgtggta
gacacggtccggagtaaccagatgccaaacctcaccagcatgtactcagcagaccaccgt
gttatggtggagaaggtcggccaagaactgcttccaccagaaaagcacacttttgaagtg
cgggctgagacggacctcaagacagtctacagggcaattcagcgtcttctgctgggctac
aaggatgagcggagaggccccactctgattgctgtgcagtcaaactgggacttgaagagg
ttggtacttgggatgcctgtctttgaggagttcccgctggttcctgtccaggtaattgat
gacatcaactatggagtcctggactggcagcgccacgctgccagacgcatgatccggcac
tacctcaacctggacacatgcctatctcaggcctttgaaatgagcaggtactatcacatt
cctgttgggaaccttcctgatgacatctccacctttggcacagacctgttcttttcccgc
cacctccaccgccataaccatctcctgtggctttctcccacttcccgcccagatttgggg
ggcaaagaggcagatgacagccgcctggtcatggaatttgatgagagggtctctgtggag
atcaatcaccctggctgctattccacagtgtgtgttgagctggatatccaaagccttgcc
gtgaacaccatcttgcagtctcaccacatcaatgacatggaaggggcatccagcatgtgc
atcagctttgatgtggttcagcaggcatcgctggaggacatggtcacagggaaccaggcc
agcaccccagctagctatgatgaaacggctctttgttcccacactttcaggatcctgaag
agcatggtggtaggctgggtgaaggagatcacacagtaccacaacgtctatgctgataac
caagtgatccacttctatcgctggctgcgctcaccaacgtcattgctgtatgaccctgcc
ctgcaccgcacattgcacaacttgatgaagaagctgttcttacaattggtggcagagttc
aagcgtcttggctcctccgtggtttatgccaacttcaaccgcatcatcttgtgcaccaag
aaacgtcgcattgaggatgccctttcctatgtagagtacatcaccaacagcatccattca
aaggaaatcttccactccttgacaatttccttctcacgctgctgggagttcttgctctgg
atggatccagccaactacggtgggatcaagggcaaagtgccttccagtgtccactgtggg
gagaaggagacaggcaagaaggaggcatcagatgaggaaagcagtgaaggggaagaggtg
gaggacgaagaaggaggagcagaagaagatggcggagaagaacagctggaaaacaactgg
aatatcatgcagtacttgccccagacagcctcttgccagaattacttcctcatgattgtc
tctgcctacatagttgctgtgtaccacagcatgaaggaagaaatgcggcagaacacccct
gggaacacccccatcaaaagacgggcaaacagccagatctcccaggagcccaggggagag
ccaggtgctatgcctggcgtgatcaccttctcacaggaatatgttgccaatgaacttacc
cagagcttcttcaccatcacccagaagatccagaagaaagtgagtggctctcgccgcacc
acggaaccttctgagatgtttccagcccttcctggctcatacctaatgttcaacaaccca
gcactggagttcattaaatgtgtctgtcaggtattgtctctagacactaacatcaccaac
caggtgagcaagctgaagcgagacctccttcgcttaattgaagtgggtgaattttcagaa
gaggcccactttcaggacccctgtcgctcctacgttctcccagaggtgatctgcaggaac
tgcaacttctgcagggatttggacctctgcaaggacccagccctctctcaggatggctcc
attctgcccaactgggtatgttccaactgccaagcccactacgactctgagggtatagag
atggctctggtggaagccttgcagaagaagctgatggccttcatgcttcaggatctggtg
tgccagaagtgcaaaggcatcaaggacacccacatgcccgtgtactgcagctgtgctggg
gactttgacctcctcttgcctaccaagaccttcatggagcatttgaagatcttccagagc
attgcccagcactacaacatggccttcttgctggaaaccattaaatggctgctacagatg
aaccctcattttctctga
DBGET
integrated database retrieval system
