Sphaerodactylus townsendi (Townsend's least gecko): 125443019
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Entry
125443019 CDS
T08213
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125443019 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125443019 (THOC5)
03041 Spliceosome [BR:
stow03041
]
125443019 (THOC5)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125443019 (THOC5)
Spliceosome [BR:
stow03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125443019 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Motif
Other DBs
NCBI-GeneID:
125443019
NCBI-ProteinID:
XP_048370829
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All DBs
Position
LG13:complement(37995433..38019652)
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AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRSRPDADQDARYYSEEAEVDLRDPSKDYDQYKQTCQ
DLQKLMAEIQELKSKGSKDSAAEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVKEFYEEAPAEISKPEITT
SDLHQQTLSRLDWELEQRKRLAEKYKECLANKETILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYLSMPFDQVHKQYETARHLPPPLYVLFVQASAYGQACDKKLAVAIEGNVEEAKAL
CKPPEDSQDDESDSDAEEEQTTKRRRSTLGVQLDDKRKEMLKRHPLSVTIDLKCKDGSVL
HLTFYYLMNLNVMTVKAKVTAATEMTTAISAGDLLSPDSLLSCLYPGDHGKRTPNPANQF
QFDKVGILTLSDYVIELGHPYVWVQKLGGLHFPKDQPQQPVIADSSLSASHMERTMKLLK
MRLESRLALHKQFASLEHGILPVSSECQHLFPTKIMSRLVKWIALTYEDYLELPYTKDVV
EAGLAEDTHLYYMALVERGTAKLQAAVVLNPGYSSVPPIFSLCLNWKGEKTRSNDDNIQS
MESEVNVYYKELCGPKPGYQLLTNQLQRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLR
LVRGPSRMKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgactccagcaagaaacggaagcccaaggttatccgcacagatggaggacca
caggagggcaagagaagcaggccagatgctgaccaggatgccagatactacagtgaagag
gcagaagttgatctgcgagaccccagtaaagattacgaccagtacaaacagacctgccag
gaccttcagaagcttatggcagagatccaggaactgaaaagcaaaggcagcaaagacagc
gctgctgagatagaggaacgtcgcattcagagctgcgtgcacttcatgactctgaagaaa
ctcaatcgtttagctcacattcgcctaaagaagggaagggaccagactcatgaggccaaa
cagaaagtggacgcgtatcacttgcaactccagaatctgctgtatgaagtcatgcacctg
cagaaggagatcacaaaatgcctggagtttaaatccaaacatgaggaaattgagttggtg
agcgtcaaggagttctacgaagaagcccctgcagaaatcagcaagccagagatcacgacg
agtgaccttcaccaacagactctttcccgtcttgattgggagctggagcagcgcaaacgg
ttggcggagaagtataaagaatgtctagccaacaaagagacgattctgaaagagatagaa
gtgaagaaggaatacctgagcaacctgcagcctcggctcaatagcatcatgcaggcttct
ctccctgtccaagagtacctctccatgccttttgaccaggtgcacaagcagtacgagacg
gccaggcacctgccaccgcctctctatgtcctctttgtccaagccagtgcctacggccag
gcctgtgataagaagctggctgttgctatagaaggaaacgtggaagaagccaaagcactc
tgcaaacccccagaggactctcaagatgatgagagcgattcagatgctgaggaggagcaa
accacgaaacgtcgtcgctcaacgctgggggttcagctggatgataagcgcaaggagatg
ctaaagaggcaccctctgtctgtcacgattgacctgaaatgcaaagacggcagcgtgctc
cacttgaccttctactatttgatgaacctcaatgtcatgacagtcaaagcaaaggtgact
gcagcaaccgagatgaccacggcaatcagtgctggtgacctgctgtcccctgattccctt
ttgagctgcttgtaccctggagatcatgggaagcggactcccaatcctgccaaccagttc
cagtttgataaagttggtatcctgaccctgagtgactatgtgatagagctgggccatcct
tacgtgtgggtgcagaagttggggggtttgcacttccccaaggatcagcctcagcagcct
gtgatagccgacagctctctgagtgccagccacatggagaggacgatgaaattgctcaag
atgaggctggagtcccgcctggccctgcacaaacaatttgcttcccttgagcatggaatc
ctcccagtctccagtgaatgccagcacctctttcccacaaagatcatgtcgcgtttggtg
aagtggatcgctctcacatatgaggattacctggagctgccctacaccaaagatgttgtg
gaggctggtctggctgaggatactcacctgtattacatggcactggtcgaaagaggaaca
gccaaactccaggctgctgtggtgctgaatccagggtactcttctgtgccacctatcttc
agcctgtgcctgaactggaagggggaaaagacccgcagcaatgatgacaacatccagtcc
atggagagtgaggtcaatgtctattacaaggagctgtgtggccccaagccaggctaccag
ctcctgaccaatcagctgcagcgcttgtgcgtcgtcttggatgtctacctggagacggag
acccacgacaacagcgtggaggggcccaaggagtttccacaggagaagatgtgtctgcgc
ctggtgaggggacccagccgaatgaaacctttcaagttcaactatcctcaggggttcttc
agccatcgttga
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integrated database retrieval system
