Sphaerodactylus townsendi (Townsend's least gecko): 125443249
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Entry
125443249 CDS
T08213
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125443249 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125443249 (EXOSC6)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125443249 (EXOSC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
125443249
NCBI-ProteinID:
XP_048371190
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All DBs
Position
LG14:complement(20612642..20614190)
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AA seq
286 aa
AA seq
DB search
MPLDHRRVPGPEESQAPLLFVPAAAQDAEPPPGDARRDPTALQPLFARVGLLSQAKGSAY
VELDGGTKVLCAVAGPREAGGGGGGGPSGGEPRGRLACEFRRAPFSGRGARGRPSDREPE
LSLALQEALEPAVRLARYPRAQLDVSALLLQDGGSALAAALCAAGLALADAGVELYDLVA
ACALCRPPSGGEWLLQPGEAEERGAAASLTVALLPALGQVSGLLGSGQGGEPESWAQAVR
LGLDGCQRLYPLLRQSLLRAAKRKSAQTTQEPSEGETGEPPAAPTA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggaccacaggcgggtgcccggcccggaggagtcgcaggcgccgctgctgttc
gtgcccgcggcagcccaggatgcagagcctccgccgggagacgcgcgccgggacccgacg
gcgctgcagccgctgttcgcccgcgtggggctgctgagccaggcgaaaggctcggcctac
gtggagctggacggcggcaccaaagtgctgtgcgccgtggccgggccgcgcgaagcgggg
ggcggcgggggcggcgggccgagcggcggcgagcctcgggggcggctggcgtgcgagttc
cgccgggcgccgttctccgggcgcggggcccgcgggcggccgagcgaccgggagccggag
ctgagcctggcgctgcaggaggcgctggagccggccgtgcgcctggcgcgctacccgcga
gcgcagctggacgtgagcgcgctgctcctgcaggacggcggctccgcgttggcggccgcc
ttgtgcgccgcggggctggcgctggccgacgccggcgtggagctgtacgacctggtggcc
gcctgcgcgctctgccggccgccctcggggggcgagtggctgctgcagccgggcgaggcc
gaggagcgcggcgccgccgccagcctcaccgtggcgctcctgccggcgctggggcaggtc
tcgggcttgctgggcagcgggcagggcggggagccggagagctgggctcaggccgtgcgc
ctcggcctcgacggctgccagcgcctctacccgctgctgcgccaaagcctcctgcgcgcc
gccaagcgcaaaagcgcccagacgacccaagagccgtccgagggggagacgggggagccc
cctgctgcgcccaccgcttga
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