Sphaerodactylus townsendi (Townsend's least gecko): 125443261
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Entry
125443261 CDS
T08213
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04120
Ubiquitin mediated proteolysis
stow04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125443261 (SYVN1)
04120 Ubiquitin mediated proteolysis
125443261 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125443261 (SYVN1)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125443261 (SYVN1)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125443261 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_5
zf-HC5HC2H
FAR1_N
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
125443261
NCBI-ProteinID:
XP_048371218
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All DBs
Position
LG01:complement(26918601..26950743)
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AA seq
622 aa
AA seq
DB search
MFRTAIMMSASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVM
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEAGQQPPAHQT
PLIPQPPNFPQGMLPPFPPGMFPLWPPMGPFPPVPGAQPPNNTDSASAAPSTSGTQPAAG
IPRPSGDSTAATGTVPGFPFPPPWMGMPFPPLFGFPPMPVPPSGFAGLTEEELRAMEGHE
RQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGTPRFVPSPSAPATSASPQDTVRAE
PSTSESTTLQSADSTTSAAVEPDSSSQADPPLVAGAEGYTAPSGPEQDDEPSSLEEPDTV
ELRKRRLQKLELPSSSSSSSSH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacagccatcatgatgtctgccagcctggccttgacctcggcagtggtggcc
cacgcctattaccttaagcaccagttctacccaactgttgtgtacctgacgaagtccagt
cccagcatggcggttctgtacattcaggctttcgtcctggtgttcctgttaggcaaattc
atgggcaaagtattttttgggcagctgcgagctgcagaaatggagcatctgcttgagcgg
tcatggtatgcagtgaccgagacctgccttgccttcacagtcttcagggatgacttcagc
ccccgttttgtggcccttttcacactcctgctcttcctcaagtgcttccactggctggct
gaagaccgggtggactttatggagagaagtccaaatatttcctggctgttccatttccgc
atcgtctctctgatgctgctgttgggtatcctggatttcttgtttgtcaaccatgcctat
catagtatcctcacacggggagcctctgtccagctggtctttggctttgagtatgccatc
ctcatgacaatggtgctcactatcttcatcaaatacatcctgcactccatcgacctccag
agtgagaatccctgggacaacaaggcagtctacatgctttacacagaactctttacaggt
ttcatcaaggtgttgctgtacatggccttcatgaccatcatgatcaaagtgcataccttc
ccactctttgccatccggccgatgtacctggctatgaggcaatttaaaaaggctgtgaca
gatgccatcatgtcccgccgggccatacgcaacatgaacaccctgtatcctgatgccacc
ccagaagagctgcaggccatggataatgtgtgcattatctgtcgggaggagatggtgatg
ggtgcaaagcggttgccttgcaaccacatattccacaccagctgcttgcggtcgtggttc
cagcgtcagcagacctgccccacgtgccggatggatgtcctccgtgcctccctcccaact
cagtcccaaacacctcccgagcagcaggaggcagggcagcagccgcccgcccaccagacc
ccactgattcctcagccgcccaattttccccaaggtatgctgcctccttttccacctggg
atgttccctttgtggccccccatgggcccatttcctccagtgcctggtgcccagcccccc
aacaacacagacagtgcttcagctgctccttccacatccgggacacagccagcagcaggc
attccacgacccagtggagactccacagccgccacgggaacagtgccaggtttccccttc
cctccaccatggatggggatgcctttcccacctctctttgggttcccacctatgccagtt
ccaccctcgggatttgcaggactgactgaagaagaactgcgagccatggaaggccatgaa
cggcagcatttggaagcccggctccagtgcctgcagaacattcacacgctcctcgatgca
gccatgctgcagatcaaccagtatctcacagtcctggccactattgggacgcctcgcttt
gtgccatcaccaagtgctccggccacttcagcatcccctcaggacactgtcagagcagag
cccagcaccagtgaatccaccactttgcagtcagctgacagcaccacttcggcagcagtg
gaaccggattcctcaagccaagcagatccacccctagtggcaggtgctgagggttacaca
gccccatctggtcctgagcaggatgatgagccgtcttctctggaggagcctgacaccgta
gagctgcgcaaacgccgccttcaaaaactggaactgccctcctcctcgtcgtcctcttcc
tcccattga
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