Sphaerodactylus townsendi (Townsend's least gecko): 125443330
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Entry
125443330 CDS
T08213
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04110
Cell cycle
stow04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125443330 (SMC1B)
04114 Oocyte meiosis
125443330 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125443330 (SMC1B)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125443330 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
125443330 (SMC1B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
NUDIX
COMP
Motif
Other DBs
NCBI-GeneID:
125443330
NCBI-ProteinID:
XP_048371308
LinkDB
All DBs
Position
LG14:32396196..32429256
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AA seq
1226 aa
AA seq
DB search
MGYLKLLMVENFKSWRGQQCIGPFKKFTCVIGPNGSGKSNVMDALSFVMGEKASNLRVRH
VRELIHGAHVGKPVSSTGSVSMVYCEENGEEKTFSRIIRGNGSEFLVNGAAVNRSAYTKE
LTEIGIIVKARNCLVFQGEVESIAMKKPKERTQLFEQISSSGELAVEYAEKKTLMQKAEE
DAQFSYNKKKNVAAERKRAKLEKNEADHYQMLFEELREYKSQLQLFQLYHNEQTTKFFQN
KLASKIIDIDTKKIAISNAEDTVKAKKKMLGMLSRDQQHIEKEIKSLEALLNQRKSQYVK
AKEKTTHQIKKSDMAKEVFKKHMKQQDKQEETKKELEGELKDIDKARRAFERKVEEETLL
RAEDVLLEESQLNKYKELKELVRKRVAMLVQQQEKLQWEQKADEEKMSFDKRRQKDIEGS
LKQVMEQIEDHKNRAQKLQEYSSSCMKSLLEKKQEEELLASELEHSKTQMAKVNEELIKI
VSDLHNAKIDVYEGKRQQMRAENLESLRRLYPGSVFGRVVDLCHPIHKKYQLAITKLFGK
YMTAIVVASEKVAIECIAFLKGERAEPEMFLPLDFLEVEPINEQLREIKGTKMMVDVIQT
SFPPLKKVIQFICGNGLICETVKEARQMAFDGPRRLKTVALDGTLFLKSGIISGGSSYLK
MKARCWDEKEINELKERRENLMNELKDLLKIQRREADLRQLQAQCHGLQTRHKYSKSELD
LIEKKQLSSFSKEKSKLESELVNIQSQLAMLNEEVLQRARKISEFQKKIDEVEDGVFREF
CEEIGVENIRVYEKEHLQKQEEIDKKRFEFENQKTRLSVQLEYISDQLAKEINKSNSLKE
TLCKADAEIASFKKTRGLAWLRKTRPVKKTEVAKAQSQVEEQRTILLTLNRELGKLQKEA
VAIETLLEEKKLERHNRLLDCKLCNVKINLLLGSLDDISEVELRSGTESTEATADIFERE
EAMRVDYSSLADELKELRSDKETEAHLARLQQEVTSKENTLLKKAAPNMRALERLHIVTG
RFQESTDVFEASRKEAKLCRQAFEQVKKRRYDLFSQCFEHVCIAIDQIYKKLCRNNSAQA
FLSPENPEEPYLEGIGYNCVAPGKRFMPMDNLSGGEKSVAALALLFAMHSFRPAPFFVLD
EVDAALDNTNISKVSSFIKQQSHEKFQIIVISLKEEFYSKADALIGVCPQEDDFMFSQVF
TVDLTLYLDPHENERQLKRKKSSVSK
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgggatacttaaagctcttgatggtggagaatttcaaatcatggcgagggcagcaatgc
attggtccgttcaagaaattcacttgcgtcattggtcctaatggttcaggaaagtcaaat
gtaatggatgcccttagttttgttatgggtgaaaaagcatctaatttaagagtgagacac
gttcgggaacttatacatggagcacatgttggaaagccagtttcttcaactggaagcgta
agcatggtgtattgtgaagaaaatggagaagagaaaacattttcaagaattatccgaggt
aatggttccgaatttcttgtcaatggtgctgctgtcaatcgatcggcatatacaaaagaa
cttacagaaattggcataattgttaaagcacggaattgcctggtttttcagggtgaagtc
gaatcaattgcaatgaagaaacccaaggaaagaacgcagctttttgaacaaattagtagt
tcaggagagcttgctgttgaatatgctgaaaagaaaacgcttatgcagaaagcagaagaa
gatgctcagtttagttacaataagaagaagaatgtggcagctgagcgtaaacgtgcaaag
ttagagaaaaatgaggcagaccattaccagatgctttttgaagaactgagagagtacaag
agtcagctgcagcttttccagttatatcacaacgaacaaacaaccaaatttttccagaat
aaattggcttcaaaaatcatagatattgatactaagaaaatagcaatttctaatgcagaa
gatacagtaaaagccaagaaaaagatgcttggaatgttaagcagagaccagcagcatatt
gaaaaggaaattaaatctctggaagctttgctgaatcaaaggaaatctcaatatgtaaaa
gccaaagagaaaaccactcaccaaattaaaaaatcagacatggcaaaggaagtctttaaa
aagcatatgaaacagcaggacaagcaagaagaaaccaaaaaagaactggagggagagctg
aaagatatcgataaagcacggcgagcatttgaaagaaaggttgaagaggagaccttgctg
cgggcggaagacgttctgctggaagaaagtcagctaaataaatataaggaactgaaagaa
ttagtgaggaaaagagtagcaatgttggttcaacaacaggaaaaattgcagtgggaacaa
aaagcagatgaagaaaaaatgtcatttgacaagcgaagacagaaagacattgagggaagc
ctaaaacaagttatggaacagatagaagatcacaaaaaccgagctcagaagctacaggaa
tacagcagctcatgcatgaaatctttattggagaagaaacaagaagaagaattgctggcc
agtgaactagaacattcaaaaacacaaatggccaaagtaaacgaggaacttattaaaatt
gtcagtgatcttcacaatgctaaaattgatgtctatgaggggaaacgtcagcagatgaga
gcggaaaacctggagagcctccgaaggctgtatcctggttctgtgtttggaagggtcgtt
gatctgtgtcatcctatccataaaaaataccagcttgctatcaccaaactttttggcaag
tacatgactgcgattgttgtagcttcagaaaaagtggctattgagtgtatcgctttcctc
aagggagagagagctgagccagaaatgtttcttcctttggattttcttgaggttgaacct
atcaatgaacagttaagagagataaaaggaactaaaatgatggttgatgtgatacagaca
tcttttcctccccttaagaaagtgattcagtttatttgtgggaatggtctgatttgtgaa
acagtaaaggaagcaaggcagatggcctttgatggaccccgtcgactgaaaacagttgct
cttgatggaactttatttttgaaatctggaataatctctggaggatcaagttacttgaaa
atgaaggctagatgctgggatgaaaaagaaataaatgagcttaaagagagaagagagaat
ctgatgaatgaactgaaggatttgttgaaaatccagcgcagggaggctgatttaaggcaa
ttacaggctcagtgccacggacttcaaactcgacacaaatattcaaaaagtgagctagac
ttaattgagaagaaacagctgtccagtttctccaaggagaaatctaagctggaaagtgaa
ttggtaaatattcagtcccagcttgctatgctgaatgaagaagttttacagagagcaaga
aaaatcagtgagttccaaaagaaaattgatgaggtagaagatggtgttttccgtgaattc
tgtgaagagattggtgtagaaaatattcgtgtatatgaaaaagaacacttgcaaaagcag
gaagaaattgacaagaagagatttgaatttgaaaaccagaagacacgactaagtgttcag
cttgagtatatttctgaccagctagcaaaggagatcaacaagtcaaattctctgaaagag
actctttgcaaagcggacgctgagattgccagctttaaaaagacaagaggcctggcttgg
ctgagaaagacgaggccagttaagaaaactgaggttgccaaagctcagagtcaagtggag
gagcaaaggacaatattgctaactctgaacagagagttgggaaagttacaaaaggaagct
gtggccattgagaccttgctggaagagaaaaaactagaaaggcataatcggcttcttgac
tgcaagctctgcaatgtaaagataaacctccttctgggatctctggatgacatcagtgaa
gtagagctaagaagtggtacagaaagtacagaagcgacagccgatatctttgaacgagag
gaggcaatgcgtgtagattatagcagtcttgcagatgagctgaaggaattgcgatctgac
aaagagaccgaggcccacctggcacgacttcagcaagaagtgacatctaaagaaaacact
ttattaaaaaaagcagccccaaacatgagagccttggagagattacatattgtcacaggc
agattccaggaatcaactgatgtgtttgaggccagcaggaaggaagccaagttatgtagg
caagcatttgaacaagtgaaaaaaaggagatatgacctattcagtcagtgttttgagcat
gtgtgtatagctatcgatcagatatacaagaaattgtgcaggaacaacagtgctcaggca
tttcttagtccggagaatcctgaagaaccatacttggaaggcatcggctacaactgtgta
gctccaggaaaacgatttatgccgatggacaacctgtcaggaggtgaaaaatctgtagca
gccttggctcttctgtttgcaatgcacagctttagaccggccccctttttcgttttggat
gaagtggatgcagctctagataacacaaacattagcaaggtatcaagttttatcaagcaa
cagtcccatgaaaagtttcagatcatagttatttctctaaaggaagagttttattctaaa
gcagatgctttaattggagtttgccctcaggaagatgatttcatgttcagtcaagtcttc
actgtggaccttactctgtatctagacccacatgaaaatgaaagacagctgaagcgcaaa
aagagctctgtgtcaaaataa
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