Sphaerodactylus townsendi (Townsend's least gecko): 125443550
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Entry
125443550 CDS
T08213
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04137
Mitophagy - animal
stow04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125443550 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125443550 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125443550 (AMFR)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
125443550 (AMFR)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125443550 (AMFR)
Multi subunit type E3
ERAD complex
125443550 (AMFR)
LMBR1L-GP78-UBAC2 complex
125443550 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
125443550
NCBI-ProteinID:
XP_048371702
LinkDB
All DBs
Position
LG14:complement(7513748..7543687)
Genome browser
AA seq
646 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTALSALALAGSILSAYRALSQAAEEQREGPPESQQPTTTEEQP
AGEDRPSPGLGPSGADVASYLLSDGLCVWVLVNTACCILMLIAKLIQCAVFGPLRVSERQ
HLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSP
TTPMNSHIRVMTLLVAMLLSCCGLAVVCGIFGYTHGMHTLSFMAAESLLVTVRTVHVILR
YVIHLWDLNHEGTWESKGTYVYYTDFIMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFM
QLRYLFHEVQRRLRRHKNYLRVVGNMEARFAVATPEELAANNDDCAICWDSMQSARKLPC
GHLFHNSCLRSWLEQDTSCPTCRMSLNITDNRRAREDHQRENLDENLAPVAVAEGRPHLN
QHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNSQINAMSHQIQEMFPQVPYHLI
LQDLQLTRSVEITTDNILEGRIQVPFPTQRSESIRPALNSPLERHSADQEDPEEAAQTER
VPLKLKSQLEEMAEFNEMEVDSAEMEDFEVRGSRFSKSADERQRMLVQRKEDLLHQARRR
YLNKASDEMGSDIPLQAEGATSDPITLRRRTLAAAAERRLQKQHPS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctggagcgcttcccttggcccagcctgcgcacttacacggcgctc
agcgctctggccttggccggcagcatcctcagcgcctaccgcgccctcagccaggccgcc
gaagaacaacgggaaggcccgcccgagtcgcaacagccgacgacgacggaggagcagccg
gccggggaggacaggccgtcgccgggattggggccgagcggggcggatgtcgcctcctac
ttgctctcggacggcctctgcgtctgggtgctcgtgaatactgcttgctgtattctgatg
ctaatcgcgaaactaattcagtgtgcggtgtttggtcctctccgtgttagtgagagacag
catctcaaggataagttttggaatttcatcttctacaagtttatctttatttttggcgtg
ttaaatgtccagacagtggaagaagtggtcatgtggtgcctttggttctctgggctggta
tttctccatctcatggttcagctttgcaaggacaggtttgaatatctctctttttctccc
actacaccaatgaacagccacatcagagtcatgaccctgctggtggctatgttgctttcc
tgctgtggattggcagttgtgtgcggcatttttggctatacccatggaatgcatacatta
tctttcatggcagctgagtctctgcttgttacagtgagaaccgttcatgtgattttacgt
tacgtcattcatctctgggatctcaaccatgaaggcacatgggaaagcaaagggacttac
gtttattacacggattttatcatggagttaactcttctgtcgctggacctgatgcatcac
attcacatgctgctgtttggcaatatctggttgtcgatggccagcctggtgatctttatg
cagctgcgttacctgttccacgaggttcagcgtagacttcgccgccacaagaactacctc
cgtgtggttgggaacatggaagcgaggtttgcagttgcgacaccagaagaactagcagcc
aacaatgatgactgtgccatctgctgggattccatgcagtccgcacgtaaactcccctgt
ggtcatctcttccacaactcctgcctgcgctcctggctagaacaagacacttcctgcccc
acctgcaggatgtctctgaatatcaccgataaccgtcgtgccagggaggaccaccaaaga
gagaacctggatgaaaatttggctcctgtggccgtggcagaaggcagacctcacttgaac
cagcacaatcacttcttccattttgatggctcacgcatagctagctggctacccagcttt
tcagtggaggtgatgcataccaccaatatccttggaattgcgcaggcgtccaactcccag
attaatgcaatgtcacatcagatccaggagatgtttcctcaggtcccttaccacctcatt
ctgcaagatctgcagctgactcggtctgtcgaaataaccactgacaacatcttagagggc
cgtatccaagtgcctttcccaacacagcgatcagagagcattagacctgcgttgaacagt
cccttggaaaggcacagcgctgatcaagaggatcctgaagaggctgctcagactgagaga
gtccctctgaaacttaaatcacagctggaagaaatggcagagttcaatgagatggaagtg
gactcagccgagatggaagactttgaagtgagagggagccgtttttccaagtcggccgat
gaaaggcagcggatgttggtgcagaggaaggaagaccttttgcatcaagctcgcaggcgt
tacctcaacaaagcttcagatgagatgggctcagacatccccctgcaggccgaaggagca
acttccgaccccatcaccttgcgtcgcagaactttggctgctgcagcggaacggaggctt
cagaagcagcacccgtcctaa
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