Sphaerodactylus townsendi (Townsend's least gecko): 125443616
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Entry
125443616 CDS
T08213
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125443616 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125443616 (VPS35)
Membrane trafficking [BR:
stow04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125443616 (VPS35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Imm5
KH_GLD-3_1st
ADIP
Motif
Other DBs
NCBI-GeneID:
125443616
NCBI-ProteinID:
XP_048371806
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Position
LG14:17042148..17067310
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKSKLMDALKHASNMLGELRTSLLSP
KSYYELYMAISDELHYMEVYLTEEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNALTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPAEDPD
PEDFADEQGLVGRFIHLLRSDDPDQQYMILNTARKHFGAGGNQRIRFTLPPLVFVAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFGEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYVYFYEKENDAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacacagcagtccccgcaagatgagcaggagaaactcctggatgaagctatt
caggccgttaaagtccagtctttccagatgaaacgatgcttggataaaagcaagttgatg
gatgctctgaagcatgcctccaacatgctgggcgagttacggacttccttgttgtcccca
aagagctattacgaactctatatggccatttccgatgagctccactacatggaagtatac
ctgacggaagagtttgccaaagggcggaaagtggcggatctctatgagctggtgcagtac
gccgggaacatcataccacgcctctatttactgataaccgttggggttgtctatgtgaag
tccttccctcagtccaggaaggacattttaaaagacttggtggaaatgtgccgcggagtc
cagcatccgctgcgaggtctttttctccgcaactaccttcttcagtgcacgcggaatatc
ttgcctgatgacggagagcaaacagatgaagaaaccaccggggacatcagcgattccatg
gacttcgtcctgctgaactttgcggagatgaacaagctctgggtgcgcatgcagcaccaa
ggacacagtcgggaccgagagaagagagaacgagagaggcaggagctaagaatcctggtg
ggaaccaacttggtccgtctcagccagctggagggagtcaacgtagaaagatataagcag
atcgtcttgcctggtatattggagcaggtagtaaactgcagggatgcgctagctcaagaa
tacctcatggagtgtatcatacaggttttcccggatgaatttcacctccaaaccttgaat
cctttcctccgagcatgtgcagagttgcaccaaaatgtgaatgtcaaaaacattatcatt
gcattaatcgacaggctcgcattgtttgctcatcgagaagatggaccagggatccccgct
gatatcaaactgtttgacattttctcccaacaggtggccactgtcatacagtccaggcaa
gacatgccttcggaagacgtggtgtccttgcaagtttctctcattaatctggccatgaag
tgctacccagatcgtgtcgactatgtggacaaagtcctggagacgacagtggaaatcttc
aataagcttaatctggaacacatcgcgaccagcagtgccgtttcaaaggagctgacccgg
ctcttgaagattcctgttgatacttacaacaacgccctgaccgtcttgaagctgaaacat
ttccaccccctttttgagtatttcgactacgagtctaggaagagcatgagttgttacgtg
cttagcaatgtgctagattacaacacggagattgtctcccaggaccaggtggattccatc
atgaacctggtatccacgctgatccaggaccagccggatcagcctgctgaagacccggat
cccgaggactttgccgacgagcagggcctggtgggcaggttcattcaccttcttcgctcc
gacgatcccgatcaacagtacatgatcttaaacaccgctcggaagcacttcggagccggg
gggaaccagcgcatccgtttcacgctgccgcctttggtcttcgtggcctaccagcttgcg
ttccgctataaggagaactccaaagtggatgacaaatgggagaagaaatgccagaagatc
ttttcctttgcccatcagacaatcagcgctttgatcaaagccgagctggcggagctgcct
ttgcggcttttcctgcagggggcgctcgctgccggggagatcgggtttgagaaccacgag
acggtggcctacgaattcatgtcccaggcgttctctctgtacgaagatgaaatcagcgat
tccaaagcccagctggccgcaatcaccttgataattgggacgtttgagcggatgaagtgc
ttcggcgaggagaatcatgagcctctgaggacgcagtgcgctttggccgcctccaagctg
ctgaagaagccggatcagtgccgggccgtcagcacctgcgctcacctcttctggtctggc
cggaacacggataagaacggggaagagctgcacggcgggaagagagtcatggagtgcttg
aagaaggcactgaaaattgccaaccagtgcatggacccctccctccaagtccagctcttc
atcgagatcctgaacagatatgtctacttttatgaaaaggaaaacgacgcagtgacaatt
caggttttgaatcagctcattcaaaagatccgcgaagatcttccgaacctggaatccacc
gaggagacggagcaaatcaacaaacactttcacaacaccctggagcatttgcgattgcgg
agagagtcgccggagtcagaagggcccatctacgaagggctggtcatttag
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