Sphaerodactylus townsendi (Townsend's least gecko): 125443657
Help
Entry
125443657 CDS
T08213
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125443657 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stow01007
]
125443657 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stow03016
]
125443657 (KARS1)
Enzymes [BR:
stow01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
125443657 (KARS1)
Amino acid related enzymes [BR:
stow01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125443657 (KARS1)
Transfer RNA biogenesis [BR:
stow03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125443657 (KARS1)
Prokaryotic type
Other AARSs
125443657 (KARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
125443657
NCBI-ProteinID:
XP_048371868
LinkDB
All DBs
Position
LG14:26093136..26103051
Genome browser
AA seq
604 aa
AA seq
DB search
MLGWARRLRRLLLLLPPPPPSSARALPPLRSCSRPPPPPGGPPSELKRRLKAERKVAEKE
AKHKEDGEKPPAPPAPDEDALLDPTQYYKIRSQAIQLLKGTPEDPYPHKFHVDLSLMDFI
EKYSHLKAGEHLTDITVRVAGRVHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEY
FCINNKLRRGDIIGVQGNPGKTKKGELSIIPSEITLLSPCLHMLPHLHFGLKDKETRFRQ
RYLDLIINDFVRQKFIIRAKIITYIRSFLDELGFLEIETPMMNIVPGGAVAKPFITYHNE
LDMNLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYKD
LMEITEQLISGMVKQITGGYKVTYHPEGPEGQAYEIDFTPPFRRISMVDELERVLGITLP
RTDQFETEETRKFFDAVCEERGVECPLPRTTARLLDKLVGEYLEVTCINPTFICDHPQTM
SPLAKWHRFRQGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFI
DETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDKKKEAPPEAPPE
GTSV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctgggcccggaggctgcggcggctgctgctgctgctgcctccgccaccgccg
tcgtcagcccgggccctcccgcctctgcgcagctgcagccgccctcctcctcctcctggg
ggcccgccgagtgagctgaagaggcgcctgaaggccgagaggaaagtggcggagaaggag
gccaagcacaaggaggatggcgagaagccgccggccccgccagcccccgacgaggatgcc
ctgctggaccccacccaatactacaagatccgcagccaagccatccagctgttgaagggc
acacctgaagatccctatccgcacaagttccacgtggatctgtcgcttatggatttcata
gagaagtacagccatctaaaggcaggggagcacttgactgacatcacggtgagagttgca
ggtcgggtccatgcaaaacgtgcctctggagggaagctgatcttctacgatcttcgtgga
gagggagttaagctgcaagttatggcaaactccagaaactacaaatctgaagaggaatac
ttctgtattaacaacaagcttcgccgtggggacattattggcgttcaggggaacccaggc
aagacaaagaaaggggagttgagcataattccttctgaaatcacgctgctctctccgtgt
cttcacatgctgcctcatcttcattttgggctcaaagacaaggaaaccagatttcggcag
agatacctggatttaattattaatgattttgtgagacaaaagttcattatccgggcaaag
attataacatacattcgaagtttcctagatgagctgggttttttggagattgagacaccc
atgatgaacatcgtccctggtggggctgtggcaaaacccttcatcacctaccacaacgaa
ctggacatgaacctctacatgaggatagcgccagagctctatcacaagatgctggtggtt
ggaggaatggacagagtctatgaaattgggcgccagttccgaaatgaaggcattgattta
acgcacaacccagagttcactacgtgtgaattttatatggcttatgctgactacaaagac
ttgatggagatcaccgagcagctgatttcaggaatggtgaagcagatcacgggcggttac
aaggtcacttaccaccctgaaggccctgaaggtcaagcatacgaaatagatttcacccca
cccttccggagaatcagcatggtggacgagttggagagagtgctggggatcacactccct
aggacagaccagtttgaaacagaagagacccgcaaattctttgatgctgtctgtgaagag
agaggtgttgaatgcccactgcctcggactactgcccggctccttgataagctggtgggg
gagtatttggaagtgacctgcatcaaccccacatttatctgtgatcaccctcagaccatg
agtcccttggccaaatggcatcgctttcggcaggggctgactgagcgctttgagcttttt
gtaatgaagaaggaggtgtgcaatgcgtacacagagctgaacgacccttttcggcagcgg
cagctctttgaagatcaggcaaaggccaaagctgctggagatgatgaagctatgttcatt
gatgagaccttctgcaccgctctggaatatgggcttcccccaacagccggctggggcatg
ggcatcgaccgcctgactatgttccttactgactcaaacaacattaaggaggtgctgctg
tttcctgccatgaagcctgacgacaagaagaaggaggcaccgccggaggcaccgccggag
gggacttctgtgtga
DBGET
integrated database retrieval system
