Sphaerodactylus townsendi (Townsend's least gecko): 125443733
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Entry
125443733 CDS
T08213
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125443733
Cell adhesion molecules [BR:
stow04515
]
Cadherins
Protocadherins
125443733
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
EVI2A
Motif
Other DBs
NCBI-GeneID:
125443733
NCBI-ProteinID:
XP_048371988
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Position
LG14:36720624..36723131
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AA seq
808 aa
AA seq
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MEILHNRQGWSFFLCLCMCGAICESFRYSVVEEKKSGSLVANVLQDLKADVKELTARRAR
LVPEGIEQYFQLDPHSGNVLLKERIDREALYGQKDTCVLLSEIVLENPLQVHGIEVEIED
VNDNSPQFSKKEFLFEIFEHVSTNTRFPLENADDADRGENAVQNYTLSPNDHFRLDVQSH
PDGTKYAELVLQKQLDREEEHRFVLILSVVDGGIPKRTGTAQIIIDVLDSNDNFPVFDKN
MHKVKIMENSQPGTLVAKVEAHDRDLGSNAEITYSFIQAPDDIQRMFKLNKHTGELTVAE
NIDYEIHQNYAINIKATDGGGLSAYCKVMVEVEDRNDNAPEVTLTSLSSPLPEDSPPDTL
VALLRITDRDSGDNGRTSCITEANLPFMLKPSVNNYYQLVTQQALDREKASEYNISITAI
DRGSPRLSSTTIINVQISDVNDNAPVFHKSSYEMQLLENNIPGLLIGLVQAKDLDTERNA
KVIYSLLPGKVRDQPMSSYVSINSETGNLYAIRSLDYEQIKEFQVTVRAGDSGSPPLSSE
VKVRVIIVDENDNAPFILYPLQNGTSPSNDLVPREAEAGYLVTKVVAVDRDSGQNSWLSY
ELLKATEPGLFSVGVQNGEVKTMRPISKRDSLKQKLIIGIRDNGHPPQSTSATLSILLVD
GFSDPYMKSVDVPKEEMVQEEDQTLTMYLVICLAVISVIFLVSMVGFVAIKIQKRRKFIA
SSALNFPVGPNFPENYGDAGTGSLSRAYNYEVCLAGGSLNSEFKFLRPLFPVFSVEPAQN
QEVQRISSGSQDLSSHQAESQLRSQVRV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggaaatactgcacaacaggcaaggttggtcttttttcttgtgtctctgcatgtgtggg
gcaatatgtgagtctttccgctattcagtggttgaggaaaagaaaagtgggtctctggtg
gcaaatgtgctacaagatttaaaagcagatgtaaaggagcttacagctcgcagagccagg
ctggttcctgaaggcatcgagcaatatttccagctggatcctcactctgggaatgtgtta
ttgaaggaaagaatagacagagaagctctatatggtcagaaggacacctgtgtcttactc
tcagagattgtgctggaaaacccattgcaagtgcacggaattgaggtggaaatagaggat
gtgaatgacaattccccccagttctctaagaaggaattcctttttgaaatatttgaacat
gtatcaacaaatacccgattccctctggagaatgctgatgatgcagacagaggagaaaat
gctgttcagaattacactcttagtccaaatgaccattttcggctggatgtacaaagtcac
cctgatgggacaaaatatgcagaattggtgttgcagaaacaattagaccgtgaagaggaa
caccgttttgttctgattctgtctgttgtggatggcgggatcccaaagagaacaggcacg
gcacaaatcatcattgatgttttggattcaaatgataattttcctgtttttgataaaaat
atgcacaaagtgaaaataatggaaaacagccaaccgggcacactggttgccaaagtggaa
gcacatgaccgtgaccttggttccaatgcagagatcacttattccttcatccaggcacca
gatgatattcaaagaatgttcaagttaaacaaacatactggggaacttactgttgcagag
aacattgattatgaaatacatcaaaattatgcaataaacatcaaagctaccgatggaggg
gggctctctgcttactgcaaagtcatggtggaggttgaggaccgaaatgacaacgcccca
gaggtgaccctcacatccctcagcagccccttaccagaagattctcctcctgatacactg
gtggcgcttttacgtatcacagaccgagactctggagacaacggcagaacttcttgcatc
actgaggcaaatttaccattcatgttgaaaccctctgtgaataattattaccagctggtg
acccagcaggccctagaccgagaaaaagcatcagagtacaacatctccatcacagccata
gacaggggctctcccaggctcagttccaccacaataatcaatgtccaaatctcagatgtg
aatgataatgctccagtattccacaaatcctcatatgaaatgcagttactggagaataat
attcctgggctgctgataggtttggtgcaagccaaggacctggacacagagcggaatgct
aaagtcatctattcacttttgcctgggaaggtcagagatcaacccatgtcctcttatgtc
tccatcaactctgaaactgggaatctttatgctattcgatctctggactatgaacagata
aaagaattccaggtgactgtgagggctggggacagtggatctcctcccctgagctccgaa
gttaaggtccgagttattattgtggatgaaaacgataatgccccgttcatcctgtacccc
cttcagaacggcacttccccatccaatgacctagttcccagggaggccgaggctggctac
ctggtcaccaaagtggtggccgtggacagagattctggtcagaactcttggctttcctat
gagctgctgaaggccacagaaccaggtctattcagtgtgggagtccagaacggagaagtg
aaaacaatgaggcccataagtaaacgagacagcctcaaacagaaactcatcattggaatc
agagacaatggtcaccctccccagtccacctctgcaacgctgagcattctgctagtggat
ggcttctctgacccttatatgaaaagtgtggatgtcccaaaggaggaaatggtgcaggag
gaagaccagaccctgactatgtatctggtcatatgcttggctgtcatctcagtcatcttt
ctggtgtccatggtggggtttgttgccatcaagattcagaaaaggcgaaagttcatagcg
agctccgccctgaatttcccagtgggaccgaatttcccagagaactacggagatgctggt
actggatccctttcccgggcgtacaactatgaggtttgcctagctggtgggtccctgaac
agcgagttcaagtttctcaggcctctctttcctgtcttctctgtggagcctgctcaaaat
caggaggttcaaaggatttcaagtggctcccaagatctttccagtcatcaagcagaaagt
cagctcaggagtcaggtgagagtataa
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